RNA–Protein interactions for RNA: YPL089C

RLM1, Transcript of MADS-box transcription factor, yeast

Gene RLM1, Length 2,031 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RLM1	YPL089C	MRP4	P32902	394 aa		1.54	□□□□□ -2.16
RLM1	YPL089C	SKT5	P34226	696 aa		1.54	□□□□□ -2.16
RLM1	YPL089C	AVT5	P38176	459 aa		1.54	□□□□□ -2.16
RLM1	YPL089C	YBR137W	P38276	179 aa		1.54	□□□□□ -2.16
RLM1	YPL089C	YJL213W	P40896	331 aa		1.54	□□□□□ -2.16
RLM1	YPL089C	SPG5	P42933	373 aa		1.54	□□□□□ -2.16
RLM1	YPL089C	SFH5	P47008	294 aa		1.54	□□□□□ -2.16
RLM1	YPL089C	RRP46	P53256	223 aa	Predicted RBP	1.54	□□□□□ -2.16
RLM1	YPL089C	YGR117C	P53270	476 aa		1.54	□□□□□ -2.16
RLM1	YPL089C	RRN9	P53437	365 aa		1.54	□□□□□ -2.16
RLM1	YPL089C	WSC2	P53832	503 aa		1.54	□□□□□ -2.16
RLM1	YPL089C	BCH1	Q05029	724 aa		1.54	□□□□□ -2.16
RLM1	YPL089C	ARR1	Q06596	294 aa		1.54	□□□□□ -2.16
RLM1	YPL089C	YPR078C	Q06813	372 aa		1.54	□□□□□ -2.16
RLM1	YPL089C	RSA1	Q08932	381 aa		1.54	□□□□□ -2.16
RLM1	YPL089C	THP3	Q12049	470 aa	Known RBP	1.54	□□□□□ -2.16
RLM1	YPL089C	GLE1	Q12315	538 aa		1.54	□□□□□ -2.16
RLM1	YPL089C	YOP1	Q12402	180 aa		1.54	□□□□□ -2.16
RLM1	YPL089C	RRP12	Q12754	1228 aa	Known RBP	1.54	□□□□□ -2.16
RLM1	YPL089C	YOR338W	Q99326	363 aa		1.54	□□□□□ -2.16
RLM1	YPL089C	FSH3	Q99369	266 aa		1.54	□□□□□ -2.16
RLM1	YPL089C	CBP2	P03874	630 aa	Predicted RBP	1.54	□□□□□ -2.16
RLM1	YPL089C	SSC1	P0CS90	654 aa	Known RBP	1.54	□□□□□ -2.16
RLM1	YPL089C	MAS2	P11914	482 aa		1.54	□□□□□ -2.16
RLM1	YPL089C	CAP2	P13517	287 aa		1.54	□□□□□ -2.16
RLM1	YPL089C	DBR1	P24309	405 aa	Known RBP	1.54	□□□□□ -2.16
RLM1	YPL089C	AGA1	P32323	725 aa		1.54	□□□□□ -2.16
RLM1	YPL089C	HMX1	P32339	317 aa		1.54	□□□□□ -2.16
RLM1	YPL089C	CHK1	P38147	527 aa		1.54	□□□□□ -2.16
RLM1	YPL089C	YBP1	P38315	674 aa		1.54	□□□□□ -2.16
RLM1	YPL089C	ALP1	P38971	573 aa		1.54	□□□□□ -2.16
RLM1	YPL089C	JLP2	P40206	208 aa		1.54	□□□□□ -2.16
RLM1	YPL089C	LYS12	P40495	371 aa	Known RBP	1.54	□□□□□ -2.16
RLM1	YPL089C	IBD2	P53892	351 aa		1.54	□□□□□ -2.16
RLM1	YPL089C	ERV25	P54837	211 aa	Known RBP	1.54	□□□□□ -2.16
RLM1	YPL089C	VTI1	Q04338	217 aa		1.54	□□□□□ -2.16
RLM1	YPL089C	AIM33	Q04516	312 aa		1.54	□□□□□ -2.16
RLM1	YPL089C	RAX1	Q08760	435 aa		1.54	□□□□□ -2.16
RLM1	YPL089C	CEX1	Q12453	761 aa		1.54	□□□□□ -2.16
RLM1	YPL089C	AIM45	Q12480	344 aa	Known RBP	1.54	□□□□□ -2.16
RLM1	YPL089C	VPS63	O13549	108 aa		1.53	□□□□□ -2.16
RLM1	YPL089C	RPC40	P07703	335 aa	Known RBP	1.53	□□□□□ -2.16
RLM1	YPL089C	RPS16A	P0CX51	143 aa	Known RBP	1.53	□□□□□ -2.16
RLM1	YPL089C	RPS16B	P0CX52	143 aa	Known RBP	1.53	□□□□□ -2.16
RLM1	YPL089C	GAL3	P13045	520 aa		1.53	□□□□□ -2.16
RLM1	YPL089C	HEM15	P16622	393 aa		1.53	□□□□□ -2.16
RLM1	YPL089C	DBP3	P20447	523 aa	Known RBP	1.53	□□□□□ -2.16
RLM1	YPL089C	CKI1	P20485	582 aa		1.53	□□□□□ -2.16
RLM1	YPL089C	GRR1	P24814	1151 aa		1.53	□□□□□ -2.16
RLM1	YPL089C	DAL80	P26343	269 aa		1.53	□□□□□ -2.16
RLM1	YPL089C	YEF1	P32622	495 aa		1.53	□□□□□ -2.16
RLM1	YPL089C	MCR1	P36060	302 aa	Known RBP	1.53	□□□□□ -2.16
RLM1	YPL089C	GPX2	P38143	162 aa		1.53	□□□□□ -2.16
RLM1	YPL089C	TIF5	P38431	405 aa	Known RBP	1.53	□□□□□ -2.16
RLM1	YPL089C	YHR122W	P38829	231 aa		1.53	□□□□□ -2.16
RLM1	YPL089C	MTC6	P38849	526 aa		1.53	□□□□□ -2.16
RLM1	YPL089C	SSO2	P39926	295 aa		1.53	□□□□□ -2.16
RLM1	YPL089C	LCP5	P40079	357 aa	Predicted RBP	1.53	□□□□□ -2.16
RLM1	YPL089C	AIM20	P40451	204 aa		1.53	□□□□□ -2.16
RLM1	YPL089C	YFL067W	P43537	175 aa		1.53	□□□□□ -2.16
RLM1	YPL089C	YGL114W	P53134	725 aa		1.53	□□□□□ -2.16
RLM1	YPL089C	MSO1	P53604	210 aa	Known RBP	1.53	□□□□□ -2.16
RLM1	YPL089C	COS1	P53822	381 aa		1.53	□□□□□ -2.16
RLM1	YPL089C	YNL146W	P53906	100 aa		1.53	□□□□□ -2.16
RLM1	YPL089C	MSC3	Q05812	728 aa		1.53	□□□□□ -2.16
RLM1	YPL089C	STE23	Q06010	1027 aa		1.53	□□□□□ -2.16
RLM1	YPL089C	CUR1	Q06469	252 aa		1.53	□□□□□ -2.16
RLM1	YPL089C	HNT3	Q08702	217 aa		1.53	□□□□□ -2.16
RLM1	YPL089C	YLR108C	Q12259	485 aa		1.53	□□□□□ -2.16
RLM1	YPL089C	POM152	P39685	1337 aa		1.53	□□□□□ -2.17
RLM1	YPL089C	PAB1	P04147	577 aa	Known RBP RIP-Chip data	1.52	□□□□□ -2.17	RIP-Chip
RLM1	YPL089C	CDC37	P06101	506 aa	Known RBP	1.52	□□□□□ -2.17
RLM1	YPL089C	RNR2	P09938	399 aa	Known RBP	1.52	□□□□□ -2.17
RLM1	YPL089C	GCD2	P12754	651 aa	Predicted RBP	1.52	□□□□□ -2.17
RLM1	YPL089C	CLN3	P13365	580 aa		1.52	□□□□□ -2.17
RLM1	YPL089C	PET18	P25362	215 aa		1.52	□□□□□ -2.17
RLM1	YPL089C	PHA2	P32452	334 aa		1.52	□□□□□ -2.17
RLM1	YPL089C	EFB1	P32471	206 aa	Known RBP	1.52	□□□□□ -2.17
RLM1	YPL089C	MUD1	P32605	298 aa	Known RBP	1.52	□□□□□ -2.17
RLM1	YPL089C	PPQ1	P32945	549 aa		1.52	□□□□□ -2.17
RLM1	YPL089C	GEP4	P38812	185 aa		1.52	□□□□□ -2.17
RLM1	YPL089C	MNN9	P39107	395 aa	Known RBP	1.52	□□□□□ -2.17
RLM1	YPL089C	PRP39	P39682	629 aa	Known RBP	1.52	□□□□□ -2.17
RLM1	YPL089C	IDP2	P41939	412 aa		1.52	□□□□□ -2.17
RLM1	YPL089C	YPI1	P43587	155 aa		1.52	□□□□□ -2.17
RLM1	YPL089C	YFR018C	P43599	363 aa		1.52	□□□□□ -2.17
RLM1	YPL089C	YHC3	P47040	408 aa		1.52	□□□□□ -2.17
RLM1	YPL089C	MPP10	P47083	593 aa	Known RBP	1.52	□□□□□ -2.17
RLM1	YPL089C	ABM1	P47146	123 aa		1.52	□□□□□ -2.17
RLM1	YPL089C	YLL053C	P0CD98	152 aa		1.52	□□□□□ -2.17
RLM1	YPL089C	OM45	P16547	393 aa		1.52	□□□□□ -2.17
RLM1	YPL089C	MRPL8	P22353	238 aa		1.52	□□□□□ -2.17
RLM1	YPL089C	MXR2	P25566	168 aa		1.52	□□□□□ -2.17
RLM1	YPL089C	TIR2	P33890	251 aa		1.52	□□□□□ -2.17
RLM1	YPL089C	MRPL40	P36534	297 aa		1.52	□□□□□ -2.17
RLM1	YPL089C	SBE22	P38814	852 aa		1.52	□□□□□ -2.17
RLM1	YPL089C	END3	P39013	349 aa		1.52	□□□□□ -2.17
RLM1	YPL089C	RTT105	P40063	208 aa		1.52	□□□□□ -2.17
RLM1	YPL089C	NCA3	P46955	337 aa		1.52	□□□□□ -2.17
RLM1	YPL089C	MTM1	P53320	366 aa		1.52	□□□□□ -2.17

Retrieved 100 of 5,963 RNA–protein pairs in 14.1 ms