RNA–Protein interactions for RNA: YJL197W

UBP12, Transcript of Ubiquitin-specific protease, yeastyeast

Gene UBP12, Length 3,765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP12YJL197W PRM9P39551 298 aa3.51□□□□□ -1.85
UBP12YJL197W SHO1P40073 367 aa3.51□□□□□ -1.85
UBP12YJL197W PHO23P50947 330 aa3.51□□□□□ -1.85
UBP12YJL197W BET4Q00618 327 aa3.51□□□□□ -1.85
UBP12YJL197W CTL1Q03220 320 aaKnown RBP3.51□□□□□ -1.85
UBP12YJL197W COX20Q04935 205 aa3.51□□□□□ -1.85
UBP12YJL197W UBA3Q99344 299 aa3.51□□□□□ -1.85
UBP12YJL197W FUS3P16892 353 aaKnown RBP3.51□□□□□ -1.85
UBP12YJL197W TOA2P32774 122 aa3.51□□□□□ -1.85
UBP12YJL197W RIM2P38127 377 aa3.51□□□□□ -1.85
UBP12YJL197W IMD3P50095 523 aaKnown RBP3.51□□□□□ -1.85
UBP12YJL197W PKP2P53170 491 aa3.51□□□□□ -1.85
UBP12YJL197W SNZ1Q03148 297 aa3.51□□□□□ -1.85
UBP12YJL197W IVY1Q04934 453 aa3.51□□□□□ -1.85
UBP12YJL197W OPI3P05375 206 aa3.51□□□□□ -1.85
UBP12YJL197W RAD3P06839 778 aa3.51□□□□□ -1.85
UBP12YJL197W KIN3P22209 435 aa3.51□□□□□ -1.85
UBP12YJL197W BUB3P26449 341 aa3.51□□□□□ -1.85
UBP12YJL197W VMA5P31412 392 aaKnown RBP3.51□□□□□ -1.85
UBP12YJL197W IMP3P32899 183 aaPredicted RBP3.51□□□□□ -1.85
UBP12YJL197W FLO10P36170 1169 aa3.51□□□□□ -1.85
UBP12YJL197W SLX1P38324 304 aa3.51□□□□□ -1.85
UBP12YJL197W YJL043WP47053 257 aa3.51□□□□□ -1.85
UBP12YJL197W IZH1Q03419 316 aa3.51□□□□□ -1.85
UBP12YJL197W CDC36P06100 191 aaPredicted RBP3.5□□□□□ -1.85
UBP12YJL197W AQY1P0CD91 305 aa3.5□□□□□ -1.85
UBP12YJL197W CWP1P28319 239 aa3.5□□□□□ -1.85
UBP12YJL197W HXT9P40885 567 aa3.5□□□□□ -1.85
UBP12YJL197W BSC6Q08280 497 aa3.5□□□□□ -1.85
UBP12YJL197W ACF2Q12168 779 aa3.5□□□□□ -1.85
UBP12YJL197W GIS3Q12418 502 aa3.5□□□□□ -1.85
UBP12YJL197W ARP6Q12509 438 aa3.5□□□□□ -1.85
UBP12YJL197W TDH2P00358 332 aaKnown RBP3.5□□□□□ -1.85
UBP12YJL197W TDH3P00359 332 aaKnown RBP RIP-Chip data3.5□□□□□ -1.85not detected
UBP12YJL197W EXO70P19658 623 aa3.5□□□□□ -1.85
UBP12YJL197W ITR1P30605 584 aa3.5□□□□□ -1.85
UBP12YJL197W DEG1P31115 442 aaKnown RBP3.5□□□□□ -1.85
UBP12YJL197W ACB1P31787 87 aa3.5□□□□□ -1.85
UBP12YJL197W SKT5P34226 696 aa3.5□□□□□ -1.85
UBP12YJL197W HIS2P38635 335 aa3.5□□□□□ -1.85
UBP12YJL197W YGR168CP53293 376 aa3.5□□□□□ -1.85
UBP12YJL197W BNA7Q04066 261 aa3.5□□□□□ -1.85
UBP12YJL197W CAC2Q04199 468 aa3.5□□□□□ -1.85
UBP12YJL197W MXR2P25566 168 aa3.5□□□□□ -1.85
UBP12YJL197W MRPS5P33759 307 aa3.5□□□□□ -1.85
UBP12YJL197W HMS2P47175 358 aa3.5□□□□□ -1.85
UBP12YJL197W NRD1P53617 575 aaKnown RBP RIP-Chip data3.5□□□□□ -1.85not detected
UBP12YJL197W BSP1Q06604 576 aa3.5□□□□□ -1.85
UBP12YJL197W YDL218WQ07629 317 aa3.5□□□□□ -1.85
UBP12YJL197W RAX1Q08760 435 aa3.5□□□□□ -1.85
UBP12YJL197W RRT12P25381 491 aa3.49□□□□□ -1.85
UBP12YJL197W COS9P36034 407 aa3.49□□□□□ -1.85
UBP12YJL197W LYS1P38998 373 aaRIP-Chip data3.49□□□□□ -1.85 RIP-Chip
UBP12YJL197W TAF6P53040 516 aa3.49□□□□□ -1.85
UBP12YJL197W EFM5P53200 248 aaKnown RBP3.49□□□□□ -1.85
UBP12YJL197W PNG1Q02890 363 aa3.49□□□□□ -1.85
UBP12YJL197W SLD5Q03406 294 aa3.49□□□□□ -1.85
UBP12YJL197W SMP3Q04174 516 aa3.49□□□□□ -1.85
UBP12YJL197W BER1Q06688 274 aaKnown RBP3.49□□□□□ -1.85
UBP12YJL197W CFT1Q06632 1357 aaKnown RBP3.49□□□□□ -1.85
UBP12YJL197W CSM1P25651 190 aa3.49□□□□□ -1.85
UBP12YJL197W COX13P32799 129 aa3.49□□□□□ -1.85
UBP12YJL197W MRPL50P53724 139 aa3.49□□□□□ -1.85
UBP12YJL197W TIM44Q01852 431 aa3.49□□□□□ -1.85
UBP12YJL197W ASA1Q06822 443 aa3.49□□□□□ -1.85
UBP12YJL197W PAM18Q07914 168 aa3.49□□□□□ -1.85
UBP12YJL197W LSB5P25369 354 aa3.49□□□□□ -1.85
UBP12YJL197W THI80P35202 319 aa3.49□□□□□ -1.85
UBP12YJL197W YKL162CP36052 402 aa3.49□□□□□ -1.85
UBP12YJL197W CSM2P40465 213 aa3.49□□□□□ -1.85
UBP12YJL197W HAM1P47119 197 aaKnown RBP3.49□□□□□ -1.85
UBP12YJL197W YIP1P53039 248 aa3.49□□□□□ -1.85
UBP12YJL197W PCP1P53259 346 aa3.49□□□□□ -1.85
UBP12YJL197W BIO4P53630 237 aa3.49□□□□□ -1.85
UBP12YJL197W TMN2Q04562 672 aa3.49□□□□□ -1.85
UBP12YJL197W RTN1Q04947 295 aaKnown RBP3.49□□□□□ -1.85
UBP12YJL197W GLO2Q05584 274 aa3.49□□□□□ -1.85
UBP12YJL197W SMC5Q08204 1093 aa3.49□□□□□ -1.85
UBP12YJL197W SRL2Q12020 392 aa3.49□□□□□ -1.85
UBP12YJL197W GET4Q12125 312 aa3.49□□□□□ -1.85
UBP12YJL197W ORT1Q12375 292 aa3.49□□□□□ -1.85
UBP12YJL197W NCB2Q92317 146 aa3.49□□□□□ -1.85
UBP12YJL197W CDC43P18898 376 aa3.48□□□□□ -1.85
UBP12YJL197W ECM4P36156 370 aa3.48□□□□□ -1.85
UBP12YJL197W YBR056WP38081 501 aa3.48□□□□□ -1.85
UBP12YJL197W MMS21P38632 267 aa3.48□□□□□ -1.85
UBP12YJL197W KRE28Q04431 385 aa3.48□□□□□ -1.85
UBP12YJL197W NAT4Q04751 285 aa3.48□□□□□ -1.85
UBP12YJL197W BNA5Q05979 453 aa3.48□□□□□ -1.85
UBP12YJL197W RPN13O13563 156 aa3.48□□□□□ -1.85
UBP12YJL197W HEM2P05373 342 aa3.48□□□□□ -1.85
UBP12YJL197W TPK3P05986 398 aa3.48□□□□□ -1.85
UBP12YJL197W RPS2P25443 254 aaKnown RBP3.48□□□□□ -1.85
UBP12YJL197W PRR1P28708 518 aa3.48□□□□□ -1.85
UBP12YJL197W CTS1P29029 562 aa3.48□□□□□ -1.85
UBP12YJL197W OMA1P36163 345 aa3.48□□□□□ -1.85
UBP12YJL197W MKC7P53379 596 aa3.48□□□□□ -1.85
UBP12YJL197W HXT11P54862 567 aa3.48□□□□□ -1.85
UBP12YJL197W ADH6Q04894 360 aaKnown RBP3.48□□□□□ -1.85
UBP12YJL197W YMR034CQ05131 434 aaPredicted RBP3.48□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 47.4 ms