RNA–Protein interactions for RNA: YJL061W

NUP82, Transcript of Linker nucleoporin component of the nuclear pore complex (NPC), yeast

Gene NUP82, Length 2,142 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NUP82	YJL061W	ASN2	P49090	572 aa	Known RBP	2	□□□□□ -2.09
NUP82	YJL061W	YLR152C	P54072	576 aa		2	□□□□□ -2.09
NUP82	YJL061W	MEH1	Q02205	184 aa		2	□□□□□ -2.09
NUP82	YJL061W	URC2	Q04411	772 aa		2	□□□□□ -2.09
NUP82	YJL061W	CMS1	Q07897	291 aa	Known RBP	2	□□□□□ -2.09
NUP82	YJL061W	AAD15	Q08361	143 aa		2	□□□□□ -2.09
NUP82	YJL061W	CUE5	Q08412	411 aa	Known RBP	2	□□□□□ -2.09
NUP82	YJL061W	SRN2	Q99176	213 aa		2	□□□□□ -2.09
NUP82	YJL061W	PUP2	P32379	260 aa		1.99	□□□□□ -2.09
NUP82	YJL061W	RAD5	P32849	1169 aa	Predicted RBP	1.99	□□□□□ -2.09
NUP82	YJL061W	GAB1	P41733	394 aa		1.99	□□□□□ -2.09
NUP82	YJL061W	BIR1	P47134	954 aa		1.99	□□□□□ -2.09
NUP82	YJL061W	MST27	P53176	234 aa		1.99	□□□□□ -2.09
NUP82	YJL061W	RTT102	P53330	157 aa		1.99	□□□□□ -2.09
NUP82	YJL061W	SMF3	Q12078	473 aa	Predicted RBP	1.99	□□□□□ -2.09
NUP82	YJL061W	YOP1	Q12402	180 aa		1.99	□□□□□ -2.09
NUP82	YJL061W	OPI3	P05375	206 aa		1.99	□□□□□ -2.09
NUP82	YJL061W	NOP1	P15646	327 aa	Known RBP	1.99	□□□□□ -2.09
NUP82	YJL061W	NUP2	P32499	720 aa		1.99	□□□□□ -2.09
NUP82	YJL061W	MCR1	P36060	302 aa	Known RBP	1.99	□□□□□ -2.09
NUP82	YJL061W	PFF1	P38244	976 aa		1.99	□□□□□ -2.09
NUP82	YJL061W	GDT1	P38301	280 aa	Predicted RBP	1.99	□□□□□ -2.09
NUP82	YJL061W	MLH1	P38920	769 aa		1.99	□□□□□ -2.09
NUP82	YJL061W	UTP18	P40362	594 aa	Predicted RBP	1.99	□□□□□ -2.09
NUP82	YJL061W	CLD1	P53264	445 aa		1.99	□□□□□ -2.09
NUP82	YJL061W	TRM112	P53738	135 aa	Predicted RBP	1.99	□□□□□ -2.09
NUP82	YJL061W	RCF1	Q03713	159 aa		1.99	□□□□□ -2.09
NUP82	YJL061W	ECM7	Q06200	448 aa		1.99	□□□□□ -2.09
NUP82	YJL061W	AHC1	Q12433	566 aa		1.99	□□□□□ -2.09
NUP82	YJL061W	HSP82	P02829	709 aa	Known RBP	1.98	□□□□□ -2.09
NUP82	YJL061W	SSC1	P0CS90	654 aa	Known RBP	1.98	□□□□□ -2.09
NUP82	YJL061W	AAT2	P23542	418 aa	Known RBP	1.98	□□□□□ -2.09
NUP82	YJL061W	RTC2	P38279	296 aa		1.98	□□□□□ -2.09
NUP82	YJL061W	YHK8	P38776	514 aa		1.98	□□□□□ -2.09
NUP82	YJL061W	YHR131C	P38835	850 aa		1.98	□□□□□ -2.09
NUP82	YJL061W	MNL1	P38888	796 aa		1.98	□□□□□ -2.09
NUP82	YJL061W	DFG10	P40526	253 aa		1.98	□□□□□ -2.09
NUP82	YJL061W	MLC1	P53141	149 aa		1.98	□□□□□ -2.09
NUP82	YJL061W	ERO1	Q03103	563 aa		1.98	□□□□□ -2.09
NUP82	YJL061W	TDA1	Q03533	586 aa		1.98	□□□□□ -2.09
NUP82	YJL061W	IPK1	Q06667	281 aa		1.98	□□□□□ -2.09
NUP82	YJL061W	YCR024C-B	Q3E7Z8	88 aa		1.98	□□□□□ -2.09
NUP82	YJL061W	RPL6B	P05739	176 aa	Known RBP	1.97	□□□□□ -2.09
NUP82	YJL061W	RRP7	P25368	297 aa	Predicted RBP	1.97	□□□□□ -2.09
NUP82	YJL061W	HXT1	P32465	570 aa		1.97	□□□□□ -2.09
NUP82	YJL061W	WSS1	P38838	269 aa		1.97	□□□□□ -2.09
NUP82	YJL061W	EPL1	P43572	832 aa		1.97	□□□□□ -2.09
NUP82	YJL061W	TIS11	P47977	285 aa		1.97	□□□□□ -2.09
NUP82	YJL061W	PMT5	P52867	743 aa		1.97	□□□□□ -2.09
NUP82	YJL061W	COS1	P53822	381 aa		1.97	□□□□□ -2.09
NUP82	YJL061W	RPL6A	Q02326	176 aa	Known RBP	1.97	□□□□□ -2.09
NUP82	YJL061W	ASA1	Q06822	443 aa		1.97	□□□□□ -2.09
NUP82	YJL061W	YDR061W	Q12298	539 aa		1.97	□□□□□ -2.09
NUP82	YJL061W	SPT10	P35208	640 aa		1.97	□□□□□ -2.09
NUP82	YJL061W	GEP4	P38812	185 aa		1.97	□□□□□ -2.09
NUP82	YJL061W	MIG3	P39943	394 aa		1.97	□□□□□ -2.09
NUP82	YJL061W	YIP5	P53108	310 aa		1.97	□□□□□ -2.09
NUP82	YJL061W	YDL114W	Q07530	308 aa		1.97	□□□□□ -2.09
NUP82	YJL061W	YFH1	Q07540	174 aa		1.97	□□□□□ -2.09
NUP82	YJL061W	LDS2	Q08218	356 aa		1.97	□□□□□ -2.09
NUP82	YJL061W	MEX67	Q99257	599 aa	Known RBP	1.97	□□□□□ -2.09
NUP82	YJL061W	PRS1	P32895	427 aa	Known RBP	1.96	□□□□□ -2.1
NUP82	YJL061W	TIR2	P33890	251 aa		1.96	□□□□□ -2.1
NUP82	YJL061W	GPX2	P38143	162 aa		1.96	□□□□□ -2.1
NUP82	YJL061W	YBL028C	P38202	106 aa		1.96	□□□□□ -2.1
NUP82	YJL061W	RXT2	P38255	430 aa		1.96	□□□□□ -2.1
NUP82	YJL061W	OXA1	P39952	402 aa		1.96	□□□□□ -2.1
NUP82	YJL061W	YNL208W	P40159	199 aa	Known RBP	1.96	□□□□□ -2.1
NUP82	YJL061W	EGT2	P42835	1041 aa		1.96	□□□□□ -2.1
NUP82	YJL061W	TOS2	P50078	622 aa		1.96	□□□□□ -2.1
NUP82	YJL061W	CRH1	P53301	507 aa		1.96	□□□□□ -2.1
NUP82	YJL061W	RRN9	P53437	365 aa		1.96	□□□□□ -2.1
NUP82	YJL061W	HAL1	Q01766	294 aa		1.96	□□□□□ -2.1
NUP82	YJL061W	YPR091C	Q06833	770 aa		1.96	□□□□□ -2.1
NUP82	YJL061W	NOP6	Q07623	225 aa	Known RBP	1.96	□□□□□ -2.1
NUP82	YJL061W	PCL9	Q12477	304 aa		1.96	□□□□□ -2.1
NUP82	YJL061W	RNA1	P11745	407 aa	Known RBP	1.96	□□□□□ -2.1
NUP82	YJL061W	ATG18	P43601	500 aa		1.96	□□□□□ -2.1
NUP82	YJL061W	AIP1	P46680	615 aa	Known RBP	1.96	□□□□□ -2.1
NUP82	YJL061W	BNS1	P50084	137 aa		1.96	□□□□□ -2.1
NUP82	YJL061W	EOS1	P53938	366 aa		1.96	□□□□□ -2.1
NUP82	YJL061W	LIP2	Q06005	328 aa		1.96	□□□□□ -2.1
NUP82	YJL061W	NAG1	Q8TGN9	163 aa		1.96	□□□□□ -2.1
NUP82	YJL061W	PCL1	P24867	279 aa		1.95	□□□□□ -2.1
NUP82	YJL061W	TOA2	P32774	122 aa		1.95	□□□□□ -2.1
NUP82	YJL061W	ANR2	P36090	516 aa	Predicted RBP	1.95	□□□□□ -2.1
NUP82	YJL061W	ECM8	P38246	354 aa		1.95	□□□□□ -2.1
NUP82	YJL061W	SPP381	P38282	291 aa	Predicted RBP	1.95	□□□□□ -2.1
NUP82	YJL061W	PTI1	P39927	425 aa	Predicted RBP	1.95	□□□□□ -2.1
NUP82	YJL061W	YMR010W	Q03687	405 aa		1.95	□□□□□ -2.1
NUP82	YJL061W	YET2	Q04210	160 aa		1.95	□□□□□ -2.1
NUP82	YJL061W	FCY22	Q12119	530 aa		1.95	□□□□□ -2.1
NUP82	YJL061W	SKS1	Q12505	502 aa		1.95	□□□□□ -2.1
NUP82	YJL061W	TFB5	Q3E7C1	72 aa	Predicted RBP	1.95	□□□□□ -2.1
NUP82	YJL061W	HSP26	P15992	214 aa	Known RBP RIP-Chip data	1.94	□□□□□ -2.1	RIP-Chip
NUP82	YJL061W	MRPL8	P22353	238 aa		1.94	□□□□□ -2.1
NUP82	YJL061W	FUN26	P31381	517 aa		1.94	□□□□□ -2.1
NUP82	YJL061W	MFG1	Q07684	458 aa		1.94	□□□□□ -2.1
NUP82	YJL061W	CDC50	P25656	391 aa		1.94	□□□□□ -2.1
NUP82	YJL061W	MSP1	P28737	362 aa		1.94	□□□□□ -2.1

Retrieved 100 of 5,963 RNA–protein pairs in 33.3 ms