RNA–Protein interactions for RNA: YGR074W

SMD1, Transcript of Core Sm protein Sm D1, yeastyeast

Gene SMD1, Length 441 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMD1YGR074W LOS1P33418 1100 aaPredicted RBP1.94□□□□□ -2.1
SMD1YGR074W YBL059WP34224 193 aa1.94□□□□□ -2.1
SMD1YGR074W MCR1P36060 302 aaKnown RBP1.94□□□□□ -2.1
SMD1YGR074W STP2P38704 541 aa1.94□□□□□ -2.1
SMD1YGR074W GEP4P38812 185 aa1.94□□□□□ -2.1
SMD1YGR074W PTH1P38876 190 aaKnown RBP1.94□□□□□ -2.1
SMD1YGR074W PRM5P40476 318 aa1.94□□□□□ -2.1
SMD1YGR074W YNL146WP53906 100 aa1.94□□□□□ -2.1
SMD1YGR074W HXT11P54862 567 aa1.94□□□□□ -2.1
SMD1YGR074W MGR3Q04472 501 aa1.94□□□□□ -2.1
SMD1YGR074W PRM6Q04705 352 aa1.94□□□□□ -2.1
SMD1YGR074W SNT309Q06091 175 aaPredicted RBP1.94□□□□□ -2.1
SMD1YGR074W ARR1Q06596 294 aa1.94□□□□□ -2.1
SMD1YGR074W YOR387CQ08910 206 aa1.94□□□□□ -2.1
SMD1YGR074W REX3Q12090 404 aa1.94□□□□□ -2.1
SMD1YGR074W RNH203Q12338 110 aa1.94□□□□□ -2.1
SMD1YGR074W EAF3Q12432 401 aa1.94□□□□□ -2.1
SMD1YGR074W AHC1Q12433 566 aa1.94□□□□□ -2.1
SMD1YGR074W PIS1P06197 220 aaKnown RBP1.93□□□□□ -2.1
SMD1YGR074W YLL053CP0CD98 152 aa1.93□□□□□ -2.1
SMD1YGR074W DAL2P25335 343 aa1.93□□□□□ -2.1
SMD1YGR074W SRB2P34162 210 aa1.93□□□□□ -2.1
SMD1YGR074W MSG5P38590 489 aa1.93□□□□□ -2.1
SMD1YGR074W SEC9P40357 651 aa1.93□□□□□ -2.1
SMD1YGR074W LYS12P40495 371 aaKnown RBP1.93□□□□□ -2.1
SMD1YGR074W YIL067CP40514 678 aa1.93□□□□□ -2.1
SMD1YGR074W HAC1P41546 238 aa1.93□□□□□ -2.1
SMD1YGR074W YHC3P47040 408 aa1.93□□□□□ -2.1
SMD1YGR074W AIM24P47127 394 aa1.93□□□□□ -2.1
SMD1YGR074W MRM2P53123 320 aa1.93□□□□□ -2.1
SMD1YGR074W CWC22P53333 577 aaKnown RBP1.93□□□□□ -2.1
SMD1YGR074W CWC25P53854 179 aaKnown RBP1.93□□□□□ -2.1
SMD1YGR074W UTP6Q02354 440 aaKnown RBP1.93□□□□□ -2.1
SMD1YGR074W NUP116Q02630 1113 aa1.93□□□□□ -2.1
SMD1YGR074W YMR102CQ03177 834 aa1.93□□□□□ -2.1
SMD1YGR074W PBA1Q05778 276 aa1.93□□□□□ -2.1
SMD1YGR074W TSR1Q07381 788 aaKnown RBP1.93□□□□□ -2.1
SMD1YGR074W SMC5Q08204 1093 aa1.93□□□□□ -2.1
SMD1YGR074W RTC5Q12108 567 aaKnown RBP1.93□□□□□ -2.1
SMD1YGR074W YBR298C-AQ8TGK4 73 aa1.93□□□□□ -2.1
SMD1YGR074W YCL021W-AQ96VH3 125 aa1.93□□□□□ -2.1
SMD1YGR074W RGS2Q99188 309 aa1.93□□□□□ -2.1
SMD1YGR074W TRP1P00912 224 aa1.92□□□□□ -2.1
SMD1YGR074W PAB1P04147 577 aaKnown RBP RIP-Chip data1.92□□□□□ -2.1 RIP-Chip
SMD1YGR074W RNA1P11745 407 aaKnown RBP1.92□□□□□ -2.1
SMD1YGR074W SPT15P13393 240 aaKnown RBP1.92□□□□□ -2.1
SMD1YGR074W YKL097CP34245 136 aa1.92□□□□□ -2.1
SMD1YGR074W ECM8P38246 354 aa1.92□□□□□ -2.1
SMD1YGR074W YHR177WP38867 453 aa1.92□□□□□ -2.1
SMD1YGR074W YHR182WP38870 785 aa1.92□□□□□ -2.1
SMD1YGR074W JLP2P40206 208 aa1.92□□□□□ -2.1
SMD1YGR074W MDE1P47095 244 aa1.92□□□□□ -2.1
SMD1YGR074W EFM3P47163 339 aa1.92□□□□□ -2.1
SMD1YGR074W SHE4P51534 789 aa1.92□□□□□ -2.1
SMD1YGR074W PMT5P52867 743 aa1.92□□□□□ -2.1
SMD1YGR074W YGL114WP53134 725 aa1.92□□□□□ -2.1
SMD1YGR074W RTT103Q05543 409 aa1.92□□□□□ -2.1
SMD1YGR074W YTH1Q06102 208 aaPredicted RBP1.92□□□□□ -2.1
SMD1YGR074W MDM36Q06820 579 aa1.92□□□□□ -2.1
SMD1YGR074W SHS1Q07657 551 aa1.92□□□□□ -2.1
SMD1YGR074W YOL075CQ08234 1294 aa1.92□□□□□ -2.1
SMD1YGR074W MDY2Q12285 212 aa1.92□□□□□ -2.1
SMD1YGR074W HMS1Q12398 434 aa1.92□□□□□ -2.1
SMD1YGR074W MEX67Q99257 599 aaKnown RBP1.92□□□□□ -2.1
SMD1YGR074W YOR338WQ99326 363 aa1.92□□□□□ -2.1
SMD1YGR074W FSH3Q99369 266 aa1.92□□□□□ -2.1
SMD1YGR074W SUP35P05453 685 aaKnown RBP1.91□□□□□ -2.1
SMD1YGR074W PHO2P07269 559 aa1.91□□□□□ -2.1
SMD1YGR074W RNR2P09938 399 aaKnown RBP1.91□□□□□ -2.1
SMD1YGR074W MAS2P11914 482 aa1.91□□□□□ -2.1
SMD1YGR074W PET123P17558 318 aa1.91□□□□□ -2.1
SMD1YGR074W RNA14P25298 677 aaKnown RBP1.91□□□□□ -2.1
SMD1YGR074W CPR3P25719 182 aa1.91□□□□□ -2.1
SMD1YGR074W POP5P28005 173 aa1.91□□□□□ -2.1
SMD1YGR074W ARO2P28777 376 aaKnown RBP1.91□□□□□ -2.1
SMD1YGR074W SSE1P32589 693 aaKnown RBP1.91□□□□□ -2.1
SMD1YGR074W TIR2P33890 251 aa1.91□□□□□ -2.1
SMD1YGR074W PTK1P36002 662 aaPredicted RBP1.91□□□□□ -2.1
SMD1YGR074W YHK8P38776 514 aa1.91□□□□□ -2.1
SMD1YGR074W ALP1P38971 573 aa1.91□□□□□ -2.1
SMD1YGR074W END3P39013 349 aa1.91□□□□□ -2.1
SMD1YGR074W PES4P39684 611 aa1.91□□□□□ -2.1
SMD1YGR074W RBG1P39729 369 aa1.91□□□□□ -2.1
SMD1YGR074W OSW5P40219 148 aa1.91□□□□□ -2.1
SMD1YGR074W NAS2P40555 220 aa1.91□□□□□ -2.1
SMD1YGR074W AIP1P46680 615 aaKnown RBP1.91□□□□□ -2.1
SMD1YGR074W RET3P53600 189 aa1.91□□□□□ -2.1
SMD1YGR074W ARP5P53946 755 aa1.91□□□□□ -2.1
SMD1YGR074W HRI1Q05905 244 aaKnown RBP1.91□□□□□ -2.1
SMD1YGR074W YPR078CQ06813 372 aa1.91□□□□□ -2.1
SMD1YGR074W NOP6Q07623 225 aaKnown RBP1.91□□□□□ -2.1
SMD1YGR074W PCL9Q12477 304 aa1.91□□□□□ -2.1
SMD1YGR074W CBS2P14905 389 aa1.9□□□□□ -2.11
SMD1YGR074W SAG1P20840 650 aa1.9□□□□□ -2.11
SMD1YGR074W HXT2P23585 541 aa1.9□□□□□ -2.11
SMD1YGR074W DBR1P24309 405 aaKnown RBP1.9□□□□□ -2.11
SMD1YGR074W GRR1P24814 1151 aa1.9□□□□□ -2.11
SMD1YGR074W PHA2P32452 334 aa1.9□□□□□ -2.11
SMD1YGR074W SBE22P38814 852 aa1.9□□□□□ -2.11
SMD1YGR074W YHR218WP38899 603 aa1.9□□□□□ -2.11
Retrieved 100 of 5,963 RNA–protein pairs in 52.5 ms