RNA–Protein interactions for RNA: YDR409W

SIZ1, Transcript of SUMO/Smt3 ligase, yeastyeast

Gene SIZ1, Length 2,715 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SIZ1YDR409W SEC53P07283 254 aaKnown RBP3.17□□□□□ -1.9
SIZ1YDR409W ASP3-2P0CX77 362 aa3.17□□□□□ -1.9
SIZ1YDR409W ASP3-3P0CX78 362 aa3.17□□□□□ -1.9
SIZ1YDR409W ASP3-4P0CX79 362 aa3.17□□□□□ -1.9
SIZ1YDR409W ASP3-1P0CZ17 362 aa3.17□□□□□ -1.9
SIZ1YDR409W GRX2P17695 143 aaKnown RBP3.17□□□□□ -1.9
SIZ1YDR409W SAG1P20840 650 aa3.17□□□□□ -1.9
SIZ1YDR409W PHO84P25297 587 aaKnown RBP3.17□□□□□ -1.9
SIZ1YDR409W EMC1P25574 760 aa3.17□□□□□ -1.9
SIZ1YDR409W YCR090CP25654 182 aaKnown RBP3.17□□□□□ -1.9
SIZ1YDR409W NTG1P31378 399 aa3.17□□□□□ -1.9
SIZ1YDR409W RTG1P32607 177 aa3.17□□□□□ -1.9
SIZ1YDR409W AIM26P32858 118 aa3.17□□□□□ -1.9
SIZ1YDR409W SEF1P34228 1148 aa3.17□□□□□ -1.9
SIZ1YDR409W TAF14P35189 244 aa3.17□□□□□ -1.9
SIZ1YDR409W KKQ8P36004 724 aa3.17□□□□□ -1.9
SIZ1YDR409W SDS22P36047 338 aa3.17□□□□□ -1.9
SIZ1YDR409W GLG1P36143 616 aa3.17□□□□□ -1.9
SIZ1YDR409W GLY1P37303 387 aaKnown RBP3.17□□□□□ -1.9
SIZ1YDR409W RIB1P38066 345 aa3.17□□□□□ -1.9
SIZ1YDR409W ARP1P38696 384 aa3.17□□□□□ -1.9
SIZ1YDR409W PPE1P38796 400 aa3.17□□□□□ -1.9
SIZ1YDR409W TIF11P38912 153 aaKnown RBP3.17□□□□□ -1.9
SIZ1YDR409W MNN9P39107 395 aaKnown RBP3.17□□□□□ -1.9
SIZ1YDR409W MAF1P41910 395 aa3.17□□□□□ -1.9
SIZ1YDR409W SCD6P45978 349 aaKnown RBP RIP-Chip data3.17□□□□□ -1.9 RIP-Chip
SIZ1YDR409W GUF1P46943 645 aa3.17□□□□□ -1.9
SIZ1YDR409W AIM23P47015 356 aa3.17□□□□□ -1.9
SIZ1YDR409W YPT32P51996 222 aaKnown RBP3.17□□□□□ -1.9
SIZ1YDR409W MRH4P53166 561 aa3.17□□□□□ -1.9
SIZ1YDR409W MRPL50P53724 139 aa3.17□□□□□ -1.9
SIZ1YDR409W VAC7P53950 1165 aa3.17□□□□□ -1.9
SIZ1YDR409W SDH1Q00711 640 aa3.17□□□□□ -1.9
SIZ1YDR409W PRP38Q00723 242 aaPredicted RBP3.17□□□□□ -1.9
SIZ1YDR409W SPP1Q03012 353 aa3.17□□□□□ -1.9
SIZ1YDR409W ARR2Q06597 130 aa3.17□□□□□ -1.9
SIZ1YDR409W HBT1Q07653 1046 aaKnown RBP3.17□□□□□ -1.9
SIZ1YDR409W YLL007CQ07799 665 aa3.17□□□□□ -1.9
SIZ1YDR409W YGK3Q12222 375 aaPredicted RBP3.17□□□□□ -1.9
SIZ1YDR409W YOR214CQ12282 236 aa3.17□□□□□ -1.9
SIZ1YDR409W ATG31Q12421 196 aa3.17□□□□□ -1.9
SIZ1YDR409W YPL247CQ12523 523 aa3.17□□□□□ -1.9
SIZ1YDR409W MHF1Q3E835 90 aa3.17□□□□□ -1.9
SIZ1YDR409W ADE5,7P07244 802 aaKnown RBP3.16□□□□□ -1.9
SIZ1YDR409W CAP2P13517 287 aa3.16□□□□□ -1.9
SIZ1YDR409W YAP1P19880 650 aaKnown RBP3.16□□□□□ -1.9
SIZ1YDR409W PEX1P24004 1043 aa3.16□□□□□ -1.9
SIZ1YDR409W ARO4P32449 370 aaKnown RBP3.16□□□□□ -1.9
SIZ1YDR409W STE14P32584 239 aa3.16□□□□□ -1.9
SIZ1YDR409W ASK1P35734 292 aa3.16□□□□□ -1.9
SIZ1YDR409W AUR1P36107 401 aaPredicted RBP3.16□□□□□ -1.9
SIZ1YDR409W ATG7P38862 630 aa3.16□□□□□ -1.9
SIZ1YDR409W YAR028WP39548 234 aa3.16□□□□□ -1.9
SIZ1YDR409W DDI1P40087 428 aa3.16□□□□□ -1.9
SIZ1YDR409W YKE4P40544 346 aa3.16□□□□□ -1.9
SIZ1YDR409W YFL066CP43538 392 aa3.16□□□□□ -1.9
SIZ1YDR409W COS4P43542 379 aa3.16□□□□□ -1.9
SIZ1YDR409W SNG1P46950 547 aa3.16□□□□□ -1.9
SIZ1YDR409W YJR154WP47181 346 aa3.16□□□□□ -1.9
SIZ1YDR409W NAS6P50086 228 aa3.16□□□□□ -1.9
SIZ1YDR409W SMA1Q02651 245 aa3.16□□□□□ -1.9
SIZ1YDR409W MSC1Q03104 513 aa3.16□□□□□ -1.9
SIZ1YDR409W HER2Q03557 464 aa3.16□□□□□ -1.9
SIZ1YDR409W CRR1Q05790 422 aa3.16□□□□□ -1.9
SIZ1YDR409W NEJ1Q06148 342 aa3.16□□□□□ -1.9
SIZ1YDR409W GRS2Q06817 618 aa3.16□□□□□ -1.9
SIZ1YDR409W ACF2Q12168 779 aa3.16□□□□□ -1.9
SIZ1YDR409W OSW2Q12202 724 aa3.16□□□□□ -1.9
SIZ1YDR409W RBD2Q12270 262 aa3.16□□□□□ -1.9
SIZ1YDR409W MRPL23Q12487 163 aaPredicted RBP3.16□□□□□ -1.9
SIZ1YDR409W ZPS1Q12512 249 aa3.16□□□□□ -1.9
SIZ1YDR409W TRP3P00937 484 aa3.16□□□□□ -1.9
SIZ1YDR409W MSF1P08425 469 aa3.16□□□□□ -1.9
SIZ1YDR409W RPB4P20433 221 aaPredicted RBP3.16□□□□□ -1.9
SIZ1YDR409W SAT4P25333 603 aaKnown RBP3.16□□□□□ -1.9
SIZ1YDR409W BUB2P26448 306 aaPredicted RBP3.16□□□□□ -1.9
SIZ1YDR409W CIN8P27895 1000 aa3.16□□□□□ -1.9
SIZ1YDR409W NDI1P32340 513 aa3.16□□□□□ -1.9
SIZ1YDR409W VID24P38263 362 aa3.16□□□□□ -1.9
SIZ1YDR409W YHR045WP38775 560 aa3.16□□□□□ -1.9
SIZ1YDR409W IPI1P38803 334 aaPredicted RBP3.16□□□□□ -1.9
SIZ1YDR409W MNN5P46982 586 aa3.16□□□□□ -1.9
SIZ1YDR409W STB4P50104 949 aa3.16□□□□□ -1.9
SIZ1YDR409W IMO32P53219 342 aa3.16□□□□□ -1.9
SIZ1YDR409W YGR168CP53293 376 aa3.16□□□□□ -1.9
SIZ1YDR409W EFM6P53970 246 aa3.16□□□□□ -1.9
SIZ1YDR409W SLG1P54867 378 aa3.16□□□□□ -1.9
SIZ1YDR409W GCN5Q03330 439 aa3.16□□□□□ -1.9
SIZ1YDR409W MDM30Q05930 598 aa3.16□□□□□ -1.9
SIZ1YDR409W LUC7Q07508 261 aaPredicted RBP3.16□□□□□ -1.9
SIZ1YDR409W COS7Q07788 383 aa3.16□□□□□ -1.9
SIZ1YDR409W YDR061WQ12298 539 aa3.16□□□□□ -1.9
SIZ1YDR409W YRM1Q12340 786 aa3.16□□□□□ -1.9
SIZ1YDR409W THP2O13539 261 aaKnown RBP3.15□□□□□ -1.9
SIZ1YDR409W YPT1P01123 206 aaKnown RBP3.15□□□□□ -1.9
SIZ1YDR409W RAD7P06779 565 aa3.15□□□□□ -1.9
SIZ1YDR409W COS2P0CX12 379 aa3.15□□□□□ -1.9
SIZ1YDR409W COS3P0CX13 379 aa3.15□□□□□ -1.9
SIZ1YDR409W RPL24BP24000 155 aaKnown RBP3.15□□□□□ -1.9
SIZ1YDR409W MEK1P24719 497 aaPredicted RBP3.15□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 21.3 ms