RNA–Protein interactions for RNA: YDR312W

SSF2, Transcript of Protein required for ribosomal large subunit maturation, yeastyeast

Gene SSF2, Length 1,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSF2YDR312W RSN1Q03516 953 aa2.39□□□□□ -2.03
SSF2YDR312W BET5Q03630 159 aa2.39□□□□□ -2.03
SSF2YDR312W SXM1Q04175 944 aaKnown RBP2.39□□□□□ -2.03
SSF2YDR312W ERB1Q04660 807 aaKnown RBP2.39□□□□□ -2.03
SSF2YDR312W SKI7Q08491 747 aaPredicted RBP2.39□□□□□ -2.03
SSF2YDR312W RRG7Q08774 242 aaPredicted RBP2.39□□□□□ -2.03
SSF2YDR312W SMC6Q12749 1114 aa2.39□□□□□ -2.03
SSF2YDR312W GSC2P40989 1895 aa2.39□□□□□ -2.03
SSF2YDR312W TY1B-AO13527 1196 aaKnown RBP2.38□□□□□ -2.03
SSF2YDR312W TRP1P00912 224 aa2.38□□□□□ -2.03
SSF2YDR312W HSP82P02829 709 aaKnown RBP2.38□□□□□ -2.03
SSF2YDR312W ISY1P21374 235 aaPredicted RBP2.38□□□□□ -2.03
SSF2YDR312W RAD57P25301 460 aa2.38□□□□□ -2.03
SSF2YDR312W RRN10P38204 145 aa2.38□□□□□ -2.03
SSF2YDR312W MMS4P38257 691 aa2.38□□□□□ -2.03
SSF2YDR312W MSG5P38590 489 aa2.38□□□□□ -2.03
SSF2YDR312W YAL037WP39728 267 aa2.38□□□□□ -2.03
SSF2YDR312W VAB2P40003 282 aa2.38□□□□□ -2.03
SSF2YDR312W PAN6P40459 309 aa2.38□□□□□ -2.03
SSF2YDR312W CAK1P43568 368 aaPredicted RBP2.38□□□□□ -2.03
SSF2YDR312W AZR1P50080 613 aa2.38□□□□□ -2.03
SSF2YDR312W SDT1P53078 280 aa2.38□□□□□ -2.03
SSF2YDR312W OCA2P53949 197 aa2.38□□□□□ -2.03
SSF2YDR312W HER2Q03557 464 aa2.38□□□□□ -2.03
SSF2YDR312W ACL4Q03771 387 aa2.38□□□□□ -2.03
SSF2YDR312W YMR130WQ04223 302 aa2.38□□□□□ -2.03
SSF2YDR312W HRI1Q05905 244 aaKnown RBP2.38□□□□□ -2.03
SSF2YDR312W YLR345WQ06137 509 aa2.38□□□□□ -2.03
SSF2YDR312W RUP1Q12242 671 aa2.38□□□□□ -2.03
SSF2YDR312W HRT3Q12347 344 aa2.38□□□□□ -2.03
SSF2YDR312W TEL1P38110 2787 aa2.38□□□□□ -2.03
SSF2YDR312W CYC3P06182 269 aa2.37□□□□□ -2.03
SSF2YDR312W NFT1P0CE68 1218 aa2.37□□□□□ -2.03
SSF2YDR312W PET123P17558 318 aa2.37□□□□□ -2.03
SSF2YDR312W SPO7P18410 259 aa2.37□□□□□ -2.03
SSF2YDR312W BRF1P29056 596 aa2.37□□□□□ -2.03
SSF2YDR312W HXT1P32465 570 aa2.37□□□□□ -2.03
SSF2YDR312W MUD1P32605 298 aaKnown RBP2.37□□□□□ -2.03
SSF2YDR312W VMA8P32610 256 aaKnown RBP2.37□□□□□ -2.03
SSF2YDR312W TFB1P32776 642 aa2.37□□□□□ -2.03
SSF2YDR312W MNS1P32906 549 aa2.37□□□□□ -2.03
SSF2YDR312W TAF12Q03761 539 aa2.37□□□□□ -2.03
SSF2YDR312W DCS1Q06151 350 aa2.37□□□□□ -2.03
SSF2YDR312W MMR1Q06324 491 aa2.37□□□□□ -2.03
SSF2YDR312W TMC1Q08422 150 aaPredicted RBP2.37□□□□□ -2.03
SSF2YDR312W COX3P00420 269 aa2.36□□□□□ -2.03
SSF2YDR312W SUP35P05453 685 aaKnown RBP2.36□□□□□ -2.03
SSF2YDR312W MDH1P17505 334 aaKnown RBP RIP-Chip data2.36□□□□□ -2.03not detected
SSF2YDR312W CLN1P20437 546 aa2.36□□□□□ -2.03
SSF2YDR312W CLB1P24868 471 aa2.36□□□□□ -2.03
SSF2YDR312W DAL2P25335 343 aa2.36□□□□□ -2.03
SSF2YDR312W LTV1P34078 463 aa2.36□□□□□ -2.03
SSF2YDR312W YBL028CP38202 106 aa2.36□□□□□ -2.03
SSF2YDR312W SLM4P38247 162 aa2.36□□□□□ -2.03
SSF2YDR312W GDT1P38301 280 aaPredicted RBP2.36□□□□□ -2.03
SSF2YDR312W RTR1P40084 226 aaPredicted RBP2.36□□□□□ -2.03
SSF2YDR312W TCB2P48231 1178 aa2.36□□□□□ -2.03
SSF2YDR312W TOM22P49334 152 aa2.36□□□□□ -2.03
SSF2YDR312W CWC25P53854 179 aaKnown RBP2.36□□□□□ -2.03
SSF2YDR312W OAZ1Q02803 292 aa2.36□□□□□ -2.03
SSF2YDR312W RCF1Q03713 159 aa2.36□□□□□ -2.03
SSF2YDR312W SNT309Q06091 175 aaPredicted RBP2.36□□□□□ -2.03
SSF2YDR312W SRL2Q12020 392 aa2.36□□□□□ -2.03
SSF2YDR312W RBD2Q12270 262 aa2.36□□□□□ -2.03
SSF2YDR312W IMA3P0CW40 589 aa2.36□□□□□ -2.03
SSF2YDR312W IMA4P0CW41 589 aa2.36□□□□□ -2.03
SSF2YDR312W NIP1P32497 812 aaKnown RBP2.36□□□□□ -2.03
SSF2YDR312W LRP1P38801 184 aaKnown RBP2.36□□□□□ -2.03
SSF2YDR312W PCF11P39081 626 aaPredicted RBP2.36□□□□□ -2.03
SSF2YDR312W SER3P40054 469 aa2.36□□□□□ -2.03
SSF2YDR312W JLP2P40206 208 aa2.36□□□□□ -2.03
SSF2YDR312W ZIM17P42844 174 aa2.36□□□□□ -2.03
SSF2YDR312W MHR1Q06630 226 aa2.36□□□□□ -2.03
SSF2YDR312W IMA2Q08295 589 aa2.36□□□□□ -2.03
SSF2YDR312W VPS54Q12071 889 aa2.36□□□□□ -2.03
SSF2YDR312W YRM1Q12340 786 aa2.36□□□□□ -2.03
SSF2YDR312W ADE4P04046 510 aaKnown RBP2.35□□□□□ -2.03
SSF2YDR312W ARO3P14843 370 aaKnown RBP2.35□□□□□ -2.03
SSF2YDR312W VMA2P16140 517 aaKnown RBP2.35□□□□□ -2.03
SSF2YDR312W KAR9P32526 644 aa2.35□□□□□ -2.03
SSF2YDR312W OLA1P38219 394 aaKnown RBP2.35□□□□□ -2.03
SSF2YDR312W YFH7P43591 353 aa2.35□□□□□ -2.03
SSF2YDR312W TIS11P47977 285 aa2.35□□□□□ -2.03
SSF2YDR312W YGL039WP53183 348 aaKnown RBP2.35□□□□□ -2.03
SSF2YDR312W YGR111WP53265 400 aa2.35□□□□□ -2.03
SSF2YDR312W RHO5P53879 331 aaKnown RBP2.35□□□□□ -2.03
SSF2YDR312W AIM32Q04689 311 aa2.35□□□□□ -2.03
SSF2YDR312W BCH1Q05029 724 aa2.35□□□□□ -2.03
SSF2YDR312W FDH1Q08911 376 aa2.35□□□□□ -2.03
SSF2YDR312W AEP3Q12089 606 aa2.35□□□□□ -2.03
SSF2YDR312W ATG34Q12292 412 aa2.35□□□□□ -2.03
SSF2YDR312W HKR1P41809 1802 aa2.35□□□□□ -2.03
SSF2YDR312W SWI1P09547 1314 aa2.34□□□□□ -2.04
SSF2YDR312W RVS161P25343 265 aaKnown RBP2.34□□□□□ -2.04
SSF2YDR312W POP5P28005 173 aa2.34□□□□□ -2.04
SSF2YDR312W SPR1P32603 445 aa2.34□□□□□ -2.04
SSF2YDR312W HEL1P36113 551 aa2.34□□□□□ -2.04
SSF2YDR312W ASC1P38011 319 aaKnown RBP2.34□□□□□ -2.04
SSF2YDR312W SFH5P47008 294 aa2.34□□□□□ -2.04
SSF2YDR312W RSC1P53236 928 aa2.34□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 91 ms