RNA–Protein interactions for RNA: YCR004C

YCP4, Transcript of Protein of unknown function, yeast

Gene YCP4, Length 744 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YCP4	YCR004C	YJL193W	P39542	402 aa		7.52	□□□□□ -1.21
YCP4	YCR004C	PRY1	P47032	299 aa		7.52	□□□□□ -1.21
YCP4	YCR004C	UBC9	P50623	157 aa	Predicted RBP	7.52	□□□□□ -1.21
YCP4	YCR004C	YNL010W	P53981	241 aa	Known RBP	7.52	□□□□□ -1.21
YCP4	YCR004C	NUP116	Q02630	1113 aa		7.52	□□□□□ -1.21
YCP4	YCR004C	SWP1	Q02795	286 aa		7.52	□□□□□ -1.21
YCP4	YCR004C	YMR310C	Q04867	317 aa	Predicted RBP	7.52	□□□□□ -1.21
YCP4	YCR004C	BUR2	Q05949	395 aa		7.52	□□□□□ -1.21
YCP4	YCR004C	COS7	Q07788	383 aa		7.52	□□□□□ -1.21
YCP4	YCR004C	PFK27	Q12471	397 aa	Predicted RBP	7.52	□□□□□ -1.21
YCP4	YCR004C	GAL3	P13045	520 aa		7.51	□□□□□ -1.21
YCP4	YCR004C	YAP1	P19880	650 aa	Known RBP	7.51	□□□□□ -1.21
YCP4	YCR004C	YGP1	P38616	354 aa	Known RBP	7.51	□□□□□ -1.21
YCP4	YCR004C	STP2	P38704	541 aa		7.51	□□□□□ -1.21
YCP4	YCR004C	PTH1	P38876	190 aa	Known RBP	7.51	□□□□□ -1.21
YCP4	YCR004C	YER010C	P40011	234 aa		7.51	□□□□□ -1.21
YCP4	YCR004C	ALG5	P40350	334 aa		7.51	□□□□□ -1.21
YCP4	YCR004C	PFK26	P40433	827 aa	Known RBP	7.51	□□□□□ -1.21
YCP4	YCR004C	PTR3	P43606	678 aa		7.51	□□□□□ -1.21
YCP4	YCR004C	MAL12	P53341	584 aa		7.51	□□□□□ -1.21
YCP4	YCR004C	YNR040W	P53736	256 aa		7.51	□□□□□ -1.21
YCP4	YCR004C	TVP15	Q03860	143 aa		7.51	□□□□□ -1.21
YCP4	YCR004C	RSA1	Q08932	381 aa		7.51	□□□□□ -1.21
YCP4	YCR004C	ADE5,7	P07244	802 aa	Known RBP	7.5	□□□□□ -1.21
YCP4	YCR004C	RNA1	P11745	407 aa	Known RBP	7.5	□□□□□ -1.21
YCP4	YCR004C	UNG1	P12887	359 aa		7.5	□□□□□ -1.21
YCP4	YCR004C	PDX1	P16451	410 aa		7.5	□□□□□ -1.21
YCP4	YCR004C	YOR062C	P36025	268 aa		7.5	□□□□□ -1.21
YCP4	YCR004C	MGE1	P38523	228 aa		7.5	□□□□□ -1.21
YCP4	YCR004C	SEN34	P39707	275 aa		7.5	□□□□□ -1.21
YCP4	YCR004C	ECM10	P39987	644 aa		7.5	□□□□□ -1.21
YCP4	YCR004C	YJL068C	P40363	299 aa		7.5	□□□□□ -1.21
YCP4	YCR004C	AYR1	P40471	297 aa		7.5	□□□□□ -1.21
YCP4	YCR004C	LEM3	P42838	414 aa		7.5	□□□□□ -1.21
YCP4	YCR004C	MTR3	P48240	250 aa	Predicted RBP	7.5	□□□□□ -1.21
YCP4	YCR004C	PAC10	P48363	199 aa		7.5	□□□□□ -1.21
YCP4	YCR004C	INP1	Q03694	420 aa		7.5	□□□□□ -1.21
YCP4	YCR004C	EMG1	Q06287	252 aa	Known RBP	7.5	□□□□□ -1.21
YCP4	YCR004C	FOL3	Q12676	427 aa	Predicted RBP	7.5	□□□□□ -1.21
YCP4	YCR004C	NFS1	P25374	497 aa		7.49	□□□□□ -1.21
YCP4	YCR004C	DMC1	P25453	334 aa		7.49	□□□□□ -1.21
YCP4	YCR004C	YBL029W	P38201	376 aa		7.49	□□□□□ -1.21
YCP4	YCR004C	TDP1	P38319	544 aa		7.49	□□□□□ -1.21
YCP4	YCR004C	PRS3	P38689	320 aa	Known RBP	7.49	□□□□□ -1.21
YCP4	YCR004C	SHO1	P40073	367 aa		7.49	□□□□□ -1.21
YCP4	YCR004C	LSG1	P53145	640 aa	Known RBP	7.49	□□□□□ -1.21
YCP4	YCR004C	HEM4	P06174	275 aa		7.48	□□□□□ -1.21
YCP4	YCR004C	STE6	P12866	1290 aa		7.48	□□□□□ -1.21
YCP4	YCR004C	AIM17	P23180	465 aa	Known RBP	7.48	□□□□□ -1.21
YCP4	YCR004C	RPI1	P23250	407 aa	Known RBP	7.48	□□□□□ -1.21
YCP4	YCR004C	CTR86	P25355	563 aa		7.48	□□□□□ -1.21
YCP4	YCR004C	NGG1	P32494	702 aa		7.48	□□□□□ -1.21
YCP4	YCR004C	NUP2	P32499	720 aa		7.48	□□□□□ -1.21
YCP4	YCR004C	STE14	P32584	239 aa		7.48	□□□□□ -1.21
YCP4	YCR004C	TOD6	P34219	525 aa		7.48	□□□□□ -1.21
YCP4	YCR004C	ANS1	P38832	159 aa		7.48	□□□□□ -1.21
YCP4	YCR004C	NSG1	P38837	291 aa		7.48	□□□□□ -1.21
YCP4	YCR004C	GAT2	P40209	560 aa		7.48	□□□□□ -1.21
YCP4	YCR004C	MSY1	P48527	492 aa		7.48	□□□□□ -1.21
YCP4	YCR004C	YNR068C	P53754	272 aa		7.48	□□□□□ -1.21
YCP4	YCR004C	REX2	P54964	269 aa	Known RBP	7.48	□□□□□ -1.21
YCP4	YCR004C	YMR010W	Q03687	405 aa		7.48	□□□□□ -1.21
YCP4	YCR004C	SAS5	Q99314	248 aa		7.48	□□□□□ -1.21
YCP4	YCR004C	BLM10	P43583	2143 aa		7.48	□□□□□ -1.21
YCP4	YCR004C	CBS1	P14066	229 aa		7.47	□□□□□ -1.21
YCP4	YCR004C	CTA1	P15202	515 aa		7.47	□□□□□ -1.21
YCP4	YCR004C	PDA1	P16387	420 aa	Known RBP	7.47	□□□□□ -1.21
YCP4	YCR004C	YHR177W	P38867	453 aa		7.47	□□□□□ -1.21
YCP4	YCR004C	CUS2	P53830	285 aa	Predicted RBP	7.47	□□□□□ -1.21
YCP4	YCR004C	RHO5	P53879	331 aa	Known RBP	7.47	□□□□□ -1.21
YCP4	YCR004C	STE23	Q06010	1027 aa		7.47	□□□□□ -1.21
YCP4	YCR004C	SGT1	Q08446	395 aa		7.47	□□□□□ -1.21
YCP4	YCR004C	HNT3	Q08702	217 aa		7.47	□□□□□ -1.21
YCP4	YCR004C	YDL211C	Q12121	372 aa		7.47	□□□□□ -1.21
YCP4	YCR004C	BSC1	Q12140	328 aa		7.47	□□□□□ -1.21
YCP4	YCR004C	SWM1	Q12379	170 aa		7.47	□□□□□ -1.21
YCP4	YCR004C	SNF8	Q12483	233 aa		7.47	□□□□□ -1.21
YCP4	YCR004C	MRP13	P12686	339 aa		7.46	□□□□□ -1.22
YCP4	YCR004C	KSS1	P14681	368 aa		7.46	□□□□□ -1.22
YCP4	YCR004C	YPT7	P32939	208 aa		7.46	□□□□□ -1.22
YCP4	YCR004C	RPT5	P33297	434 aa	Known RBP	7.46	□□□□□ -1.22
YCP4	YCR004C	PTC1	P35182	281 aa		7.46	□□□□□ -1.22
YCP4	YCR004C	TOM22	P49334	152 aa		7.46	□□□□□ -1.22
YCP4	YCR004C	SOK2	P53438	785 aa	Predicted RBP	7.46	□□□□□ -1.22
YCP4	YCR004C	NAT4	Q04751	285 aa		7.46	□□□□□ -1.22
YCP4	YCR004C	RAF1	Q06891	181 aa		7.46	□□□□□ -1.22
YCP4	YCR004C	FMP40	Q08968	688 aa	Predicted RBP	7.46	□□□□□ -1.22
YCP4	YCR004C	JLP1	Q12358	412 aa		7.46	□□□□□ -1.22
YCP4	YCR004C	Q0297	Q9ZZV8	51 aa		7.46	□□□□□ -1.22
YCP4	YCR004C	ZWF1	P11412	505 aa	Known RBP	7.45	□□□□□ -1.22
YCP4	YCR004C	NPP1	P25353	742 aa		7.45	□□□□□ -1.22
YCP4	YCR004C	SSE1	P32589	693 aa	Known RBP	7.45	□□□□□ -1.22
YCP4	YCR004C	TEF4	P36008	412 aa	Known RBP	7.45	□□□□□ -1.22
YCP4	YCR004C	ARN2	P38724	620 aa		7.45	□□□□□ -1.22
YCP4	YCR004C	GPP1	P41277	250 aa	Known RBP	7.45	□□□□□ -1.22
YCP4	YCR004C	OGG1	P53397	376 aa	Predicted RBP	7.45	□□□□□ -1.22
YCP4	YCR004C	DCP2	P53550	970 aa	Known RBP	7.45	□□□□□ -1.22
YCP4	YCR004C	DBP6	P53734	629 aa	Known RBP	7.45	□□□□□ -1.22
YCP4	YCR004C	YPL039W	Q03080	316 aa		7.45	□□□□□ -1.22
YCP4	YCR004C	YDR476C	Q03362	224 aa		7.45	□□□□□ -1.22

Retrieved 100 of 5,963 RNA–protein pairs in 55.5 ms