RNA–Protein interactions for RNA: ENST00000619555.4

TARDBP-221, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-221ENST00000619555 IER5Q5VY09 327 aa12.72□□□□□ -0.37
TARDBP-221ENST00000619555 C1QTNF1Q9BXJ1 281 aa12.72□□□□□ -0.37
TARDBP-221ENST00000619555 RC3H2Q9HBD1 1191 aaKnown RBP12.72□□□□□ -0.37
TARDBP-221ENST00000619555 TRPV2Q9Y5S1 764 aa12.72□□□□□ -0.37
TARDBP-221ENST00000619555 COL4A6Q14031 1691 aa12.72□□□□□ -0.37
TARDBP-221ENST00000619555 ADGRA3Q8IWK6 1321 aa12.71□□□□□ -0.37
TARDBP-221ENST00000619555 POTEB3A0JP26 581 aa12.71□□□□□ -0.37
TARDBP-221ENST00000619555 FAM86B1E9PN63 330 aa12.71□□□□□ -0.37
TARDBP-221ENST00000619555 hCG_1984214I3L0E3 225 aa12.71□□□□□ -0.37
TARDBP-221ENST00000619555 GRM6O15303 877 aa12.71□□□□□ -0.37
TARDBP-221ENST00000619555 DGKIO75912 1065 aa12.71□□□□□ -0.37
TARDBP-221ENST00000619555 RB1P06400 928 aa12.71□□□□□ -0.37
TARDBP-221ENST00000619555 FAM86B2P0C5J1 330 aa12.71□□□□□ -0.37
TARDBP-221ENST00000619555 BMPR1AP36894 532 aa12.71□□□□□ -0.37
TARDBP-221ENST00000619555 FGD1P98174 961 aa12.71□□□□□ -0.37
TARDBP-221ENST00000619555 BTG3Q14201 252 aaPredicted RBP12.71□□□□□ -0.37
TARDBP-221ENST00000619555 PFKFB3Q16875 520 aaPredicted RBP12.71□□□□□ -0.37
TARDBP-221ENST00000619555 PTCRAQ6ISU1 281 aaPredicted RBP12.71□□□□□ -0.37
TARDBP-221ENST00000619555 POTEBQ6S5H4 581 aa12.71□□□□□ -0.37
TARDBP-221ENST00000619555 MTHFD1LQ6UB35 978 aa12.71□□□□□ -0.37
TARDBP-221ENST00000619555 ABHD15Q6UXT9 468 aa12.71□□□□□ -0.37
TARDBP-221ENST00000619555 EP400NLQ6ZTU2 488 aa12.71□□□□□ -0.37
TARDBP-221ENST00000619555 Q6ZUG5 572 aa12.71□□□□□ -0.37
TARDBP-221ENST00000619555 PLA2G4DQ86XP0 818 aa12.71□□□□□ -0.37
TARDBP-221ENST00000619555 TEX2Q8IWB9 1127 aa12.71□□□□□ -0.37
TARDBP-221ENST00000619555 ZNF713Q8N859 430 aaPredicted RBP12.71□□□□□ -0.37
TARDBP-221ENST00000619555 NEK9Q8TD19 979 aa12.71□□□□□ -0.37
TARDBP-221ENST00000619555 TNPO1Q92973 898 aaKnown RBP12.71□□□□□ -0.37
TARDBP-221ENST00000619555 ZNF689Q96CS4 500 aaPredicted RBP12.71□□□□□ -0.37
TARDBP-221ENST00000619555 CELF4Q9BZC1 486 aaKnown RBP12.71□□□□□ -0.37
TARDBP-221ENST00000619555 GLT8D2Q9H1C3 349 aa12.71□□□□□ -0.37
TARDBP-221ENST00000619555 NSUN3Q9H649 340 aaKnown RBP12.71□□□□□ -0.37
TARDBP-221ENST00000619555 PADI3Q9ULW8 664 aa12.71□□□□□ -0.37
TARDBP-221ENST00000619555 GTF3C3Q9Y5Q9 886 aa12.71□□□□□ -0.37
TARDBP-221ENST00000619555 ATG2AQ2TAZ0 1938 aa12.7□□□□□ -0.38
TARDBP-221ENST00000619555 IGKV6D-21A0A0A0MT36 114 aa12.7□□□□□ -0.38
TARDBP-221ENST00000619555 GRXCR2A6NFK2 248 aa12.7□□□□□ -0.38
TARDBP-221ENST00000619555 C5orf67F2Z3F1 127 aa12.7□□□□□ -0.38
TARDBP-221ENST00000619555 BACH1O14867 736 aa12.7□□□□□ -0.38
TARDBP-221ENST00000619555 DHX15O43143 795 aaKnown RBP12.7□□□□□ -0.38
TARDBP-221ENST00000619555 HMGB1P09429 215 aaKnown RBP12.7□□□□□ -0.38
TARDBP-221ENST00000619555 SCG2P13521 617 aa12.7□□□□□ -0.38
TARDBP-221ENST00000619555 KLRC1P26715 233 aa12.7□□□□□ -0.38
TARDBP-221ENST00000619555 HSPA4P34932 840 aa12.7□□□□□ -0.38
TARDBP-221ENST00000619555 METAP2P50579 478 aaKnown RBP eCLIP12.7□□□□□ -0.38
TARDBP-221ENST00000619555 RCAN1P53805 252 aa12.7□□□□□ -0.38
TARDBP-221ENST00000619555 NIPA1Q7RTP0 329 aa12.7□□□□□ -0.38
TARDBP-221ENST00000619555 FAM178BQ8IXR5 827 aa12.7□□□□□ -0.38
TARDBP-221ENST00000619555 KCNB2Q92953 911 aa12.7□□□□□ -0.38
TARDBP-221ENST00000619555 CLP1Q92989 425 aaKnown RBP12.7□□□□□ -0.38
TARDBP-221ENST00000619555 BRF1Q92994 677 aa12.7□□□□□ -0.38
TARDBP-221ENST00000619555 PABPC5Q96DU9 382 aaKnown RBP12.7□□□□□ -0.38
TARDBP-221ENST00000619555 JAKMIP1Q96N16 626 aaKnown RBP12.7□□□□□ -0.38
TARDBP-221ENST00000619555 LRFN3Q9BTN0 628 aa12.7□□□□□ -0.38
TARDBP-221ENST00000619555 SQORQ9Y6N5 450 aa12.7□□□□□ -0.38
TARDBP-221ENST00000619555 IGSF9BQ9UPX0 1349 aa12.69□□□□□ -0.38
TARDBP-221ENST00000619555 MYH9P35579 1960 aaKnown RBP12.69□□□□□ -0.38
TARDBP-221ENST00000619555 IGLV3-22A0A075B6J6 115 aa12.69□□□□□ -0.38
TARDBP-221ENST00000619555 SMIM35A0A1B0GVV1 85 aa12.69□□□□□ -0.38
TARDBP-221ENST00000619555 M0QZ92 97 aa12.69□□□□□ -0.38
TARDBP-221ENST00000619555 PPFIA3O75145 1194 aa12.69□□□□□ -0.38
TARDBP-221ENST00000619555 CSPG5O95196 566 aa12.69□□□□□ -0.38
TARDBP-221ENST00000619555 RPLP2P05387 115 aaKnown RBP12.69□□□□□ -0.38
TARDBP-221ENST00000619555 CYP3A4P08684 503 aa12.69□□□□□ -0.38
TARDBP-221ENST00000619555 ATP4AP20648 1035 aa12.69□□□□□ -0.38
TARDBP-221ENST00000619555 IBSPP21815 317 aaPredicted RBP12.69□□□□□ -0.38
TARDBP-221ENST00000619555 KRT76Q01546 638 aa12.69□□□□□ -0.38
TARDBP-221ENST00000619555 PAK2Q13177 524 aa12.69□□□□□ -0.38
TARDBP-221ENST00000619555 COL19A1Q14993 1142 aa12.69□□□□□ -0.38
TARDBP-221ENST00000619555 PKN1Q16512 942 aa12.69□□□□□ -0.38
TARDBP-221ENST00000619555 TMEM266Q2M3C6 531 aa12.69□□□□□ -0.38
TARDBP-221ENST00000619555 FAM160B1Q5W0V3 765 aa12.69□□□□□ -0.38
TARDBP-221ENST00000619555 SWSAP1Q6NVH7 229 aa12.69□□□□□ -0.38
TARDBP-221ENST00000619555 CCDC60Q8IWA6 550 aaPredicted RBP12.69□□□□□ -0.38
TARDBP-221ENST00000619555 GJD3Q8N144 294 aa12.69□□□□□ -0.38
TARDBP-221ENST00000619555 CRIPAKQ8N1N5 446 aa12.69□□□□□ -0.38
TARDBP-221ENST00000619555 NME8Q8N427 588 aa12.69□□□□□ -0.38
TARDBP-221ENST00000619555 ATP8B4Q8TF62 1192 aa12.69□□□□□ -0.38
TARDBP-221ENST00000619555 CRYGNQ8WXF5 182 aa12.69□□□□□ -0.38
TARDBP-221ENST00000619555 C11orf84Q9BUA3 381 aaPredicted RBP12.69□□□□□ -0.38
TARDBP-221ENST00000619555 FTHL17Q9BXU8 183 aa12.69□□□□□ -0.38
TARDBP-221ENST00000619555 TMX1Q9H3N1 280 aa12.69□□□□□ -0.38
TARDBP-221ENST00000619555 CDHR5Q9HBB8 845 aa12.69□□□□□ -0.38
TARDBP-221ENST00000619555 ALG13Q9NP73 1137 aaKnown RBP12.69□□□□□ -0.38
TARDBP-221ENST00000619555 ZNF302Q9NR11 478 aa12.69□□□□□ -0.38
TARDBP-221ENST00000619555 CLDND1Q9NY35 253 aa12.69□□□□□ -0.38
TARDBP-221ENST00000619555 GINS2Q9Y248 185 aa12.69□□□□□ -0.38
TARDBP-221ENST00000619555 RWDD3Q9Y3V2 267 aa12.69□□□□□ -0.38
TARDBP-221ENST00000619555 SNX14Q9Y5W7 946 aa12.69□□□□□ -0.38
TARDBP-221ENST00000619555 MRPL42Q9Y6G3 142 aaKnown RBP12.69□□□□□ -0.38
TARDBP-221ENST00000619555 KDM3AQ9Y4C1 1321 aa12.68□□□□□ -0.38
TARDBP-221ENST00000619555 CCDC196A0A1B0GTZ2 297 aa12.68□□□□□ -0.38
TARDBP-221ENST00000619555 FAM86C2PA6NEL3 165 aa12.68□□□□□ -0.38
TARDBP-221ENST00000619555 PI4K2BG5E9Z4 385 aa12.68□□□□□ -0.38
TARDBP-221ENST00000619555 IPO5O00410 1097 aaKnown RBP12.68□□□□□ -0.38
TARDBP-221ENST00000619555 PRPF3O43395 683 aaKnown RBP12.68□□□□□ -0.38
TARDBP-221ENST00000619555 HBP1O60381 514 aa12.68□□□□□ -0.38
TARDBP-221ENST00000619555 REC8O95072 547 aa12.68□□□□□ -0.38
TARDBP-221ENST00000619555 SEC24BO95487 1268 aa12.68□□□□□ -0.38
TARDBP-221ENST00000619555 LTBRP36941 435 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms