RNA–Protein interactions for RNA: ENST00000614240.4

SMN2-213, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-213ENST00000614240 ZBTB43O43298 467 aa20.36■□□□□ 0.85
SMN2-213ENST00000614240 LINC00271P0C7V0 271 aa20.36■□□□□ 0.85
SMN2-213ENST00000614240 KRT76Q01546 638 aa20.36■□□□□ 0.85
SMN2-213ENST00000614240 HYAL1Q12794 435 aa20.36■□□□□ 0.85
SMN2-213ENST00000614240 PAN2Q504Q3 1202 aaKnown RBP20.36■□□□□ 0.85
SMN2-213ENST00000614240 TEX2Q8IWB9 1127 aa20.36■□□□□ 0.85
SMN2-213ENST00000614240 CMTR2Q8IYT2 770 aaKnown RBP20.36■□□□□ 0.85
SMN2-213ENST00000614240 NME8Q8N427 588 aa20.36■□□□□ 0.85
SMN2-213ENST00000614240 LINC01599Q8WXQ3 324 aa20.36■□□□□ 0.85
SMN2-213ENST00000614240 PPP2R3CQ969Q6 453 aa20.36■□□□□ 0.85
SMN2-213ENST00000614240 TCEANC2Q96MN5 208 aa20.36■□□□□ 0.85
SMN2-213ENST00000614240 GLT8D2Q9H1C3 349 aa20.36■□□□□ 0.85
SMN2-213ENST00000614240 AGO4Q9HCK5 861 aaKnown RBP20.36■□□□□ 0.85
SMN2-213ENST00000614240 NAP1L2Q9ULW6 460 aaPredicted RBP20.36■□□□□ 0.85
SMN2-213ENST00000614240 PADI3Q9ULW8 664 aa20.36■□□□□ 0.85
SMN2-213ENST00000614240 PLAGL2Q9UPG8 496 aa20.36■□□□□ 0.85
SMN2-213ENST00000614240 GINS2Q9Y248 185 aa20.36■□□□□ 0.85
SMN2-213ENST00000614240 MRPL42Q9Y6G3 142 aaKnown RBP20.36■□□□□ 0.85
SMN2-213ENST00000614240 NLRC5Q86WI3 1866 aa20.35■□□□□ 0.85
SMN2-213ENST00000614240 DDX39AO00148 427 aaKnown RBP20.35■□□□□ 0.85
SMN2-213ENST00000614240 DCXO43602 365 aa20.35■□□□□ 0.85
SMN2-213ENST00000614240 SCG2P13521 617 aa20.35■□□□□ 0.85
SMN2-213ENST00000614240 FAM160B1Q5W0V3 765 aa20.35■□□□□ 0.85
SMN2-213ENST00000614240 TYW1BQ6NUM6 668 aa20.35■□□□□ 0.85
SMN2-213ENST00000614240 MTHFD1LQ6UB35 978 aa20.35■□□□□ 0.85
SMN2-213ENST00000614240 DHX32Q7L7V1 743 aaKnown RBP20.35■□□□□ 0.85
SMN2-213ENST00000614240 RTN4RL1Q86UN2 441 aaPredicted RBP20.35■□□□□ 0.85
SMN2-213ENST00000614240 ADHFE1Q8IWW8 467 aa20.35■□□□□ 0.85
SMN2-213ENST00000614240 UPF3BQ9BZI7 483 aaKnown RBP20.35■□□□□ 0.85
SMN2-213ENST00000614240 TMEM260Q9NX78 707 aa20.35■□□□□ 0.85
SMN2-213ENST00000614240 XIRP2A4UGR9 3374 aa20.35■□□□□ 0.85
SMN2-213ENST00000614240 RALGAPA2Q2PPJ7 1873 aa20.35■□□□□ 0.85
SMN2-213ENST00000614240 IGSF9BQ9UPX0 1349 aa20.34■□□□□ 0.85
SMN2-213ENST00000614240 SMIM35A0A1B0GVV1 85 aa20.34■□□□□ 0.85
SMN2-213ENST00000614240 GOLGA8AA7E2F4 631 aa20.34■□□□□ 0.85
SMN2-213ENST00000614240 GOLGA8BA8MQT2 603 aa20.34■□□□□ 0.85
SMN2-213ENST00000614240 hCG_1984214I3L0E3 225 aa20.34■□□□□ 0.85
SMN2-213ENST00000614240 MMP1P03956 469 aa20.34■□□□□ 0.85
SMN2-213ENST00000614240 KLRC1P26715 233 aa20.34■□□□□ 0.85
SMN2-213ENST00000614240 LTBRP36941 435 aa20.34■□□□□ 0.85
SMN2-213ENST00000614240 SLC26A2P50443 739 aa20.34■□□□□ 0.85
SMN2-213ENST00000614240 FGD1P98174 961 aa20.34■□□□□ 0.85
SMN2-213ENST00000614240 ZP2Q05996 745 aa20.34■□□□□ 0.85
SMN2-213ENST00000614240 NFX1Q12986 1120 aaKnown RBP20.34■□□□□ 0.85
SMN2-213ENST00000614240 ITGB3BPQ13352 177 aaPredicted RBP20.34■□□□□ 0.85
SMN2-213ENST00000614240 AP3B2Q13367 1082 aa20.34■□□□□ 0.85
SMN2-213ENST00000614240 ZNF713Q8N859 430 aaPredicted RBP20.34■□□□□ 0.85
SMN2-213ENST00000614240 BRPF3Q9ULD4 1205 aa20.34■□□□□ 0.85
SMN2-213ENST00000614240 STXBP3O00186 592 aa20.33■□□□□ 0.85
SMN2-213ENST00000614240 MEIS1O00470 390 aa20.33■□□□□ 0.85
SMN2-213ENST00000614240 GTF2F1P35269 517 aaKnown RBP eCLIP20.33■□□□□ 0.85
SMN2-213ENST00000614240 SREBF1P36956 1147 aa20.33■□□□□ 0.85
SMN2-213ENST00000614240 TMEM266Q2M3C6 531 aa20.33■□□□□ 0.85
SMN2-213ENST00000614240 CTC1Q2NKJ3 1217 aa20.33■□□□□ 0.85
SMN2-213ENST00000614240 NAALADL2Q58DX5 795 aa20.33■□□□□ 0.85
SMN2-213ENST00000614240 P2RX5Q93086 422 aa20.33■□□□□ 0.85
SMN2-213ENST00000614240 POP1Q99575 1024 aaKnown RBP20.33■□□□□ 0.85
SMN2-213ENST00000614240 BARHL2Q9NY43 387 aa20.33■□□□□ 0.85
SMN2-213ENST00000614240 KLF18A0A0U1RQI7 1052 aa20.32■□□□□ 0.84
SMN2-213ENST00000614240 HBP1O60381 514 aa20.32■□□□□ 0.84
SMN2-213ENST00000614240 ATG7O95352 703 aa20.32■□□□□ 0.84
SMN2-213ENST00000614240 ITGB1P05556 798 aa20.32■□□□□ 0.84
SMN2-213ENST00000614240 NDUFV1P49821 464 aa20.32■□□□□ 0.84
SMN2-213ENST00000614240 EXOSC10Q01780 885 aaKnown RBP20.32■□□□□ 0.84
SMN2-213ENST00000614240 DLX2Q07687 328 aaPredicted RBP20.32■□□□□ 0.84
SMN2-213ENST00000614240 SPOUT1Q5T280 376 aaKnown RBP20.32■□□□□ 0.84
SMN2-213ENST00000614240 JAKMIP3Q5VZ66 844 aa20.32■□□□□ 0.84
SMN2-213ENST00000614240 PDXDC2PQ6P474 469 aa20.32■□□□□ 0.84
SMN2-213ENST00000614240 PLA2G4DQ86XP0 818 aa20.32■□□□□ 0.84
SMN2-213ENST00000614240 KLHL23Q8NBE8 558 aa20.32■□□□□ 0.84
SMN2-213ENST00000614240 ZNF302Q9NR11 478 aa20.32■□□□□ 0.84
SMN2-213ENST00000614240 CD207Q9UJ71 328 aa20.32■□□□□ 0.84
SMN2-213ENST00000614240 PCDHB7Q9Y5E2 793 aa20.32■□□□□ 0.84
SMN2-213ENST00000614240 MYO7AQ13402 2215 aa20.31■□□□□ 0.84
SMN2-213ENST00000614240 KDM3AQ9Y4C1 1321 aa20.31■□□□□ 0.84
SMN2-213ENST00000614240 TTC3P53804 2025 aa20.31■□□□□ 0.84
SMN2-213ENST00000614240 DENND3A2RUS2 1198 aa20.31■□□□□ 0.84
SMN2-213ENST00000614240 MBTPS2O43462 519 aa20.31■□□□□ 0.84
SMN2-213ENST00000614240 CCNE2O96020 404 aa20.31■□□□□ 0.84
SMN2-213ENST00000614240 HOXD11P31277 338 aaPredicted RBP20.31■□□□□ 0.84
SMN2-213ENST00000614240 FUT2Q10981 343 aa20.31■□□□□ 0.84
SMN2-213ENST00000614240 KRT32Q14532 448 aa20.31■□□□□ 0.84
SMN2-213ENST00000614240 SMAD2Q15796 467 aaKnown RBP20.31■□□□□ 0.84
SMN2-213ENST00000614240 BMP2KLQ5H9B9 411 aa20.31■□□□□ 0.84
SMN2-213ENST00000614240 ODR4Q5SWX8 454 aa20.31■□□□□ 0.84
SMN2-213ENST00000614240 MIS18BP1Q6P0N0 1132 aa20.31■□□□□ 0.84
SMN2-213ENST00000614240 NIPA1Q7RTP0 329 aa20.31■□□□□ 0.84
SMN2-213ENST00000614240 CKAP2LQ8IYA6 745 aa20.31■□□□□ 0.84
SMN2-213ENST00000614240 SPPL3Q8TCT6 385 aa20.31■□□□□ 0.84
SMN2-213ENST00000614240 ATP8B4Q8TF62 1192 aa20.31■□□□□ 0.84
SMN2-213ENST00000614240 RNF216Q9NWF9 866 aaPredicted RBP20.31■□□□□ 0.84
SMN2-213ENST00000614240 C19orf67A6NJJ6 358 aa20.3■□□□□ 0.84
SMN2-213ENST00000614240 LINC01565O15544 149 aa20.3■□□□□ 0.84
SMN2-213ENST00000614240 PPFIA3O75145 1194 aa20.3■□□□□ 0.84
SMN2-213ENST00000614240 RPS6KA5O75582 802 aa20.3■□□□□ 0.84
SMN2-213ENST00000614240 SARSP49591 514 aaKnown RBP20.3■□□□□ 0.84
SMN2-213ENST00000614240 GATMP50440 423 aa20.3■□□□□ 0.84
SMN2-213ENST00000614240 ADAM15Q13444 863 aa20.3■□□□□ 0.84
SMN2-213ENST00000614240 SMAD4Q13485 552 aaKnown RBP20.3■□□□□ 0.84
SMN2-213ENST00000614240 CAMK1Q14012 370 aa20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms