RNA–Protein interactions for RNA: ENST00000602492.5

PPFIA3-204, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 4

Gene PPFIA3, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-204ENST00000602492 RTN1Q16799 776 aa23.06■■□□□ 1.28
PPFIA3-204ENST00000602492 CTC1Q2NKJ3 1217 aa23.06■■□□□ 1.28
PPFIA3-204ENST00000602492 TYW1BQ6NUM6 668 aa23.06■■□□□ 1.28
PPFIA3-204ENST00000602492 CMTR2Q8IYT2 770 aaKnown RBP23.06■■□□□ 1.28
PPFIA3-204ENST00000602492 NEK1Q96PY6 1258 aa23.06■■□□□ 1.28
PPFIA3-204ENST00000602492 AGO4Q9HCK5 861 aaKnown RBP23.06■■□□□ 1.28
PPFIA3-204ENST00000602492 PPP4R2Q9NY27 417 aa23.06■■□□□ 1.28
PPFIA3-204ENST00000602492 PADI3Q9ULW8 664 aa23.06■■□□□ 1.28
PPFIA3-204ENST00000602492 MRPL42Q9Y6G3 142 aaKnown RBP23.06■■□□□ 1.28
PPFIA3-204ENST00000602492 IGSF9BQ9UPX0 1349 aa23.06■■□□□ 1.28
PPFIA3-204ENST00000602492 POTEB3A0JP26 581 aa23.05■■□□□ 1.28
PPFIA3-204ENST00000602492 hCG_1984214I3L0E3 225 aa23.05■■□□□ 1.28
PPFIA3-204ENST00000602492 ZBTB43O43298 467 aa23.05■■□□□ 1.28
PPFIA3-204ENST00000602492 DCXO43602 365 aa23.05■■□□□ 1.28
PPFIA3-204ENST00000602492 CSPG5O95196 566 aa23.05■■□□□ 1.28
PPFIA3-204ENST00000602492 STAG3L1P0CL83 205 aa23.05■■□□□ 1.28
PPFIA3-204ENST00000602492 ITGB3BPQ13352 177 aaPredicted RBP23.05■■□□□ 1.28
PPFIA3-204ENST00000602492 POTEBQ6S5H4 581 aa23.05■■□□□ 1.28
PPFIA3-204ENST00000602492 RTN4RL1Q86UN2 441 aaPredicted RBP23.05■■□□□ 1.28
PPFIA3-204ENST00000602492 ADHFE1Q8IWW8 467 aa23.05■■□□□ 1.28
PPFIA3-204ENST00000602492 NME8Q8N427 588 aa23.05■■□□□ 1.28
PPFIA3-204ENST00000602492 ZNF713Q8N859 430 aaPredicted RBP23.05■■□□□ 1.28
PPFIA3-204ENST00000602492 P2RX5Q93086 422 aa23.05■■□□□ 1.28
PPFIA3-204ENST00000602492 CELF4Q9BZC1 486 aaKnown RBP23.05■■□□□ 1.28
PPFIA3-204ENST00000602492 GLT8D2Q9H1C3 349 aa23.05■■□□□ 1.28
PPFIA3-204ENST00000602492 ALG13Q9NP73 1137 aaKnown RBP23.05■■□□□ 1.28
PPFIA3-204ENST00000602492 ATG2AQ2TAZ0 1938 aa23.05■■□□□ 1.28
PPFIA3-204ENST00000602492 SMIM35A0A1B0GVV1 85 aa23.04■■□□□ 1.28
PPFIA3-204ENST00000602492 SCG2P13521 617 aa23.04■■□□□ 1.28
PPFIA3-204ENST00000602492 HOXD11P31277 338 aaPredicted RBP23.04■■□□□ 1.28
PPFIA3-204ENST00000602492 SLC26A2P50443 739 aa23.04■■□□□ 1.28
PPFIA3-204ENST00000602492 AP3B2Q13367 1082 aa23.04■■□□□ 1.28
PPFIA3-204ENST00000602492 CSPP1Q1MSJ5 1256 aa23.04■■□□□ 1.28
PPFIA3-204ENST00000602492 CRIPAKQ8N1N5 446 aa23.04■■□□□ 1.28
PPFIA3-204ENST00000602492 PPP2R3CQ969Q6 453 aa23.04■■□□□ 1.28
PPFIA3-204ENST00000602492 IGFLR1Q9H665 355 aa23.04■■□□□ 1.28
PPFIA3-204ENST00000602492 PLAGL2Q9UPG8 496 aa23.04■■□□□ 1.28
PPFIA3-204ENST00000602492 V9GY48 417 aaPredicted RBP23.04■■□□□ 1.28
PPFIA3-204ENST00000602492 KDM3AQ9Y4C1 1321 aa23.04■■□□□ 1.28
PPFIA3-204ENST00000602492 SMCO2A6NFE2 343 aa23.03■■□□□ 1.28
PPFIA3-204ENST00000602492 C19orf67A6NJJ6 358 aa23.03■■□□□ 1.28
PPFIA3-204ENST00000602492 STXBP3O00186 592 aa23.03■■□□□ 1.28
PPFIA3-204ENST00000602492 MEIS1O00470 390 aa23.03■■□□□ 1.28
PPFIA3-204ENST00000602492 ATG7O95352 703 aa23.03■■□□□ 1.28
PPFIA3-204ENST00000602492 ZNF76P36508 570 aa23.03■■□□□ 1.28
PPFIA3-204ENST00000602492 SREBF1P36956 1147 aa23.03■■□□□ 1.28
PPFIA3-204ENST00000602492 KRT76Q01546 638 aa23.03■■□□□ 1.28
PPFIA3-204ENST00000602492 DLX2Q07687 328 aaPredicted RBP23.03■■□□□ 1.28
PPFIA3-204ENST00000602492 FUT2Q10981 343 aa23.03■■□□□ 1.28
PPFIA3-204ENST00000602492 CLUL1Q15846 466 aa23.03■■□□□ 1.28
PPFIA3-204ENST00000602492 PAN2Q504Q3 1202 aaKnown RBP23.03■■□□□ 1.28
PPFIA3-204ENST00000602492 NAALADL2Q58DX5 795 aa23.03■■□□□ 1.28
PPFIA3-204ENST00000602492 MTHFD1LQ6UB35 978 aa23.03■■□□□ 1.28
PPFIA3-204ENST00000602492 TCEANC2Q96MN5 208 aa23.03■■□□□ 1.28
PPFIA3-204ENST00000602492 UIMC1Q96RL1 719 aa23.03■■□□□ 1.28
PPFIA3-204ENST00000602492 BARHL2Q9NY43 387 aa23.03■■□□□ 1.28
PPFIA3-204ENST00000602492 BRPF3Q9ULD4 1205 aa23.03■■□□□ 1.28
PPFIA3-204ENST00000602492 GOLGA8AA7E2F4 631 aa23.02■■□□□ 1.28
PPFIA3-204ENST00000602492 GOLGA8BA8MQT2 603 aa23.02■■□□□ 1.28
PPFIA3-204ENST00000602492 BACH1O14867 736 aa23.02■■□□□ 1.28
PPFIA3-204ENST00000602492 EXOSC10Q01780 885 aaKnown RBP23.02■■□□□ 1.28
PPFIA3-204ENST00000602492 SMAD2Q15796 467 aaKnown RBP23.02■■□□□ 1.28
PPFIA3-204ENST00000602492 FAM160B1Q5W0V3 765 aa23.02■■□□□ 1.28
PPFIA3-204ENST00000602492 DHX32Q7L7V1 743 aaKnown RBP23.02■■□□□ 1.28
PPFIA3-204ENST00000602492 UPF3BQ9BZI7 483 aaKnown RBP23.02■■□□□ 1.28
PPFIA3-204ENST00000602492 TMEM260Q9NX78 707 aa23.02■■□□□ 1.28
PPFIA3-204ENST00000602492 LRFN2Q9ULH4 789 aa23.02■■□□□ 1.28
PPFIA3-204ENST00000602492 C5orf42Q9H799 3197 aa23.02■■□□□ 1.28
PPFIA3-204ENST00000602492 DDX39AO00148 427 aaKnown RBP23.01■■□□□ 1.27
PPFIA3-204ENST00000602492 MBTPS2O43462 519 aa23.01■■□□□ 1.27
PPFIA3-204ENST00000602492 HBP1O60381 514 aa23.01■■□□□ 1.27
PPFIA3-204ENST00000602492 CCNE2O96020 404 aa23.01■■□□□ 1.27
PPFIA3-204ENST00000602492 ITGB1P05556 798 aa23.01■■□□□ 1.27
PPFIA3-204ENST00000602492 GTF2F1P35269 517 aaKnown RBP eCLIP23.01■■□□□ 1.27
PPFIA3-204ENST00000602492 SMAD4Q13485 552 aaKnown RBP23.01■■□□□ 1.27
PPFIA3-204ENST00000602492 CAMK1Q14012 370 aa23.01■■□□□ 1.27
PPFIA3-204ENST00000602492 NIPA1Q7RTP0 329 aa23.01■■□□□ 1.27
PPFIA3-204ENST00000602492 ATP8B4Q8TF62 1192 aa23.01■■□□□ 1.27
PPFIA3-204ENST00000602492 POP1Q99575 1024 aaKnown RBP23.01■■□□□ 1.27
PPFIA3-204ENST00000602492 TMX1Q9H3N1 280 aa23.01■■□□□ 1.27
PPFIA3-204ENST00000602492 LOXHD1Q8IVV2 1947 aa23■■□□□ 1.27
PPFIA3-204ENST00000602492 IGKV6D-21A0A0A0MT36 114 aa23■■□□□ 1.27
PPFIA3-204ENST00000602492 TBX10O75333 385 aa23■■□□□ 1.27
PPFIA3-204ENST00000602492 KLRC1P26715 233 aa23■■□□□ 1.27
PPFIA3-204ENST00000602492 NFX1Q12986 1120 aaKnown RBP23■■□□□ 1.27
PPFIA3-204ENST00000602492 TMEM266Q2M3C6 531 aa23■■□□□ 1.27
PPFIA3-204ENST00000602492 BMP2KLQ5H9B9 411 aa23■■□□□ 1.27
PPFIA3-204ENST00000602492 ABHD15Q6UXT9 468 aa23■■□□□ 1.27
PPFIA3-204ENST00000602492 FAM43BQ6ZT52 329 aaPredicted RBP23■■□□□ 1.27
PPFIA3-204ENST00000602492 KLHL23Q8NBE8 558 aa23■■□□□ 1.27
PPFIA3-204ENST00000602492 SPPL3Q8TCT6 385 aa23■■□□□ 1.27
PPFIA3-204ENST00000602492 CD207Q9UJ71 328 aa23■■□□□ 1.27
PPFIA3-204ENST00000602492 GINS2Q9Y248 185 aa23■■□□□ 1.27
PPFIA3-204ENST00000602492 KLF18A0A0U1RQI7 1052 aa22.99■■□□□ 1.27
PPFIA3-204ENST00000602492 LINC01565O15544 149 aa22.99■■□□□ 1.27
PPFIA3-204ENST00000602492 IBSPP21815 317 aaPredicted RBP22.99■■□□□ 1.27
PPFIA3-204ENST00000602492 DNAJB1P25685 340 aa22.99■■□□□ 1.27
PPFIA3-204ENST00000602492 SARSP49591 514 aaKnown RBP22.99■■□□□ 1.27
PPFIA3-204ENST00000602492 CLK2P49760 499 aaKnown RBP22.99■■□□□ 1.27
PPFIA3-204ENST00000602492 NDUFV1P49821 464 aa22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms