RNA–Protein interactions for RNA: ENST00000594298.5

SHKBP1-203, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-203ENST00000594298 GRM6O15303 877 aa20■□□□□ 0.79
SHKBP1-203ENST00000594298 FOSP01100 380 aaPredicted RBP20■□□□□ 0.79
SHKBP1-203ENST00000594298 ALADP13716 330 aa20■□□□□ 0.79
SHKBP1-203ENST00000594298 SSTR3P32745 418 aaPredicted RBP20■□□□□ 0.79
SHKBP1-203ENST00000594298 IGBP1P78318 339 aa20■□□□□ 0.79
SHKBP1-203ENST00000594298 BTG3Q14201 252 aaPredicted RBP20■□□□□ 0.79
SHKBP1-203ENST00000594298 WWC2Q6AWC2 1192 aa20■□□□□ 0.79
SHKBP1-203ENST00000594298 PPP1R18Q6NYC8 613 aa20■□□□□ 0.79
SHKBP1-203ENST00000594298 LINC01599Q8WXQ3 324 aa20■□□□□ 0.79
SHKBP1-203ENST00000594298 SDF4Q9BRK5 362 aa20■□□□□ 0.79
SHKBP1-203ENST00000594298 RIC8AQ9NPQ8 531 aa20■□□□□ 0.79
SHKBP1-203ENST00000594298 CNTNAP5Q8WYK1 1306 aa20■□□□□ 0.79
SHKBP1-203ENST00000594298 POTEB3A0JP26 581 aa19.99■□□□□ 0.79
SHKBP1-203ENST00000594298 PRR33A8MZF0 331 aa19.99■□□□□ 0.79
SHKBP1-203ENST00000594298 MMP1P03956 469 aa19.99■□□□□ 0.79
SHKBP1-203ENST00000594298 CD52P31358 61 aa19.99■□□□□ 0.79
SHKBP1-203ENST00000594298 LTBRP36941 435 aa19.99■□□□□ 0.79
SHKBP1-203ENST00000594298 ACTR2P61160 394 aa19.99■□□□□ 0.79
SHKBP1-203ENST00000594298 APOBRQ0VD83 1088 aa19.99■□□□□ 0.79
SHKBP1-203ENST00000594298 TYW1BQ6NUM6 668 aa19.99■□□□□ 0.79
SHKBP1-203ENST00000594298 POTEBQ6S5H4 581 aa19.99■□□□□ 0.79
SHKBP1-203ENST00000594298 FAM43BQ6ZT52 329 aaPredicted RBP19.99■□□□□ 0.79
SHKBP1-203ENST00000594298 CMTR2Q8IYT2 770 aaKnown RBP19.99■□□□□ 0.79
SHKBP1-203ENST00000594298 CYP2W1Q8TAV3 490 aa19.99■□□□□ 0.79
SHKBP1-203ENST00000594298 P2RX5Q93086 422 aa19.99■□□□□ 0.79
SHKBP1-203ENST00000594298 ZBTB10Q96DT7 871 aa19.99■□□□□ 0.79
SHKBP1-203ENST00000594298 AGXT2Q9BYV1 514 aa19.99■□□□□ 0.79
SHKBP1-203ENST00000594298 FAM49AQ9H0Q0 323 aaPredicted RBP19.99■□□□□ 0.79
SHKBP1-203ENST00000594298 CLDND1Q9NY35 253 aa19.99■□□□□ 0.79
SHKBP1-203ENST00000594298 TRPC6Q9Y210 931 aa19.99■□□□□ 0.79
SHKBP1-203ENST00000594298 TRPV2Q9Y5S1 764 aa19.99■□□□□ 0.79
SHKBP1-203ENST00000594298 IGSF9BQ9UPX0 1349 aa19.99■□□□□ 0.79
SHKBP1-203ENST00000594298 hCG_1984214I3L0E3 225 aa19.98■□□□□ 0.79
SHKBP1-203ENST00000594298 M0QZ92 97 aa19.98■□□□□ 0.79
SHKBP1-203ENST00000594298 ATG7O95352 703 aa19.98■□□□□ 0.79
SHKBP1-203ENST00000594298 HOXD11P31277 338 aaPredicted RBP19.98■□□□□ 0.79
SHKBP1-203ENST00000594298 SLC26A2P50443 739 aa19.98■□□□□ 0.79
SHKBP1-203ENST00000594298 METAP2P50579 478 aaKnown RBP eCLIP19.98■□□□□ 0.79
SHKBP1-203ENST00000594298 STAT5BP51692 787 aa19.98■□□□□ 0.79
SHKBP1-203ENST00000594298 NAPAP54920 295 aa19.98■□□□□ 0.79
SHKBP1-203ENST00000594298 ZP2Q05996 745 aa19.98■□□□□ 0.79
SHKBP1-203ENST00000594298 FUT2Q10981 343 aa19.98■□□□□ 0.79
SHKBP1-203ENST00000594298 PLCB4Q15147 1175 aa19.98■□□□□ 0.79
SHKBP1-203ENST00000594298 CEP55Q53EZ4 464 aa19.98■□□□□ 0.79
SHKBP1-203ENST00000594298 NAALADL2Q58DX5 795 aa19.98■□□□□ 0.79
SHKBP1-203ENST00000594298 RTN4RL1Q86UN2 441 aaPredicted RBP19.98■□□□□ 0.79
SHKBP1-203ENST00000594298 NPAS4Q8IUM7 802 aa19.98■□□□□ 0.79
SHKBP1-203ENST00000594298 NME8Q8N427 588 aa19.98■□□□□ 0.79
SHKBP1-203ENST00000594298 ZNF713Q8N859 430 aaPredicted RBP19.98■□□□□ 0.79
SHKBP1-203ENST00000594298 AGO4Q9HCK5 861 aaKnown RBP19.98■□□□□ 0.79
SHKBP1-203ENST00000594298 PDRG1Q9NUG6 133 aa19.98■□□□□ 0.79
SHKBP1-203ENST00000594298 KDM3AQ9Y4C1 1321 aa19.98■□□□□ 0.79
SHKBP1-203ENST00000594298 IGKV6D-21A0A0A0MT36 114 aa19.97■□□□□ 0.79
SHKBP1-203ENST00000594298 SMIM35A0A1B0GVV1 85 aa19.97■□□□□ 0.79
SHKBP1-203ENST00000594298 C19orf67A6NJJ6 358 aa19.97■□□□□ 0.79
SHKBP1-203ENST00000594298 MEIS1O00470 390 aa19.97■□□□□ 0.79
SHKBP1-203ENST00000594298 ARP10275 920 aa19.97■□□□□ 0.79
SHKBP1-203ENST00000594298 ADCY7P51828 1080 aa19.97■□□□□ 0.79
SHKBP1-203ENST00000594298 HYAL1Q12794 435 aa19.97■□□□□ 0.79
SHKBP1-203ENST00000594298 ITGB3BPQ13352 177 aaPredicted RBP19.97■□□□□ 0.79
SHKBP1-203ENST00000594298 EP400NLQ6ZTU2 488 aa19.97■□□□□ 0.79
SHKBP1-203ENST00000594298 ADHFE1Q8IWW8 467 aa19.97■□□□□ 0.79
SHKBP1-203ENST00000594298 CELF4Q9BZC1 486 aaKnown RBP19.97■□□□□ 0.79
SHKBP1-203ENST00000594298 PADI3Q9ULW8 664 aa19.97■□□□□ 0.79
SHKBP1-203ENST00000594298 PLAGL2Q9UPG8 496 aa19.97■□□□□ 0.79
SHKBP1-203ENST00000594298 NLRC5Q86WI3 1866 aa19.96■□□□□ 0.79
SHKBP1-203ENST00000594298 SREBF1P36956 1147 aa19.96■□□□□ 0.79
SHKBP1-203ENST00000594298 CLK2P49760 499 aaKnown RBP19.96■□□□□ 0.79
SHKBP1-203ENST00000594298 AP3B2Q13367 1082 aa19.96■□□□□ 0.79
SHKBP1-203ENST00000594298 NIPA1Q7RTP0 329 aa19.96■□□□□ 0.79
SHKBP1-203ENST00000594298 ANO3Q9BYT9 981 aa19.96■□□□□ 0.79
SHKBP1-203ENST00000594298 GLT8D2Q9H1C3 349 aa19.96■□□□□ 0.79
SHKBP1-203ENST00000594298 MRPL42Q9Y6G3 142 aaKnown RBP19.96■□□□□ 0.79
SHKBP1-203ENST00000594298 STXBP3O00186 592 aa19.95■□□□□ 0.78
SHKBP1-203ENST00000594298 DCXO43602 365 aa19.95■□□□□ 0.78
SHKBP1-203ENST00000594298 STAG3L1P0CL83 205 aa19.95■□□□□ 0.78
SHKBP1-203ENST00000594298 EVCP57679 992 aa19.95■□□□□ 0.78
SHKBP1-203ENST00000594298 PAK2Q13177 524 aa19.95■□□□□ 0.78
SHKBP1-203ENST00000594298 CAMK1Q14012 370 aa19.95■□□□□ 0.78
SHKBP1-203ENST00000594298 SMAD2Q15796 467 aaKnown RBP19.95■□□□□ 0.78
SHKBP1-203ENST00000594298 MTHFD1LQ6UB35 978 aa19.95■□□□□ 0.78
SHKBP1-203ENST00000594298 TRAPPC12Q8WVT3 735 aa19.95■□□□□ 0.78
SHKBP1-203ENST00000594298 PGBD1Q96JS3 809 aa19.95■□□□□ 0.78
SHKBP1-203ENST00000594298 UPF3BQ9BZI7 483 aaKnown RBP19.95■□□□□ 0.78
SHKBP1-203ENST00000594298 BARHL2Q9NY43 387 aa19.95■□□□□ 0.78
SHKBP1-203ENST00000594298 V9GY48 417 aaPredicted RBP19.95■□□□□ 0.78
SHKBP1-203ENST00000594298 TTC3P53804 2025 aa19.95■□□□□ 0.78
SHKBP1-203ENST00000594298 SMCO2A6NFE2 343 aa19.94■□□□□ 0.78
SHKBP1-203ENST00000594298 SCG2P13521 617 aa19.94■□□□□ 0.78
SHKBP1-203ENST00000594298 KRT76Q01546 638 aa19.94■□□□□ 0.78
SHKBP1-203ENST00000594298 DLX2Q07687 328 aaPredicted RBP19.94■□□□□ 0.78
SHKBP1-203ENST00000594298 TMEM62Q0P6H9 643 aa19.94■□□□□ 0.78
SHKBP1-203ENST00000594298 ALG13Q9NP73 1137 aaKnown RBP19.94■□□□□ 0.78
SHKBP1-203ENST00000594298 KAT6AQ92794 2004 aa19.93■□□□□ 0.78
SHKBP1-203ENST00000594298 MBTPS2O43462 519 aa19.93■□□□□ 0.78
SHKBP1-203ENST00000594298 HBP1O60381 514 aa19.93■□□□□ 0.78
SHKBP1-203ENST00000594298 CCNE2O96020 404 aa19.93■□□□□ 0.78
SHKBP1-203ENST00000594298 PDIA3P30101 505 aaKnown RBP19.93■□□□□ 0.78
SHKBP1-203ENST00000594298 CDC27P30260 824 aa19.93■□□□□ 0.78
SHKBP1-203ENST00000594298 ANKRD1Q15327 319 aa19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms