RNA–Protein interactions for RNA: ENST00000588361.1

KDM4B-206, Transcript of lysine demethylase 4B, humanhuman

TSL 2

Gene KDM4B, Length 3,039 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4B-206ENST00000588361 ARHGAP4P98171 946 aa16.8■□□□□ 0.28
KDM4B-206ENST00000588361 SF3A3Q12874 501 aaKnown RBP eCLIP16.8■□□□□ 0.283e-7■■■□□ 15.4
KDM4B-206ENST00000588361 NNTQ13423 1086 aa16.8■□□□□ 0.28
KDM4B-206ENST00000588361 FAM153CQ494X1 144 aa16.8■□□□□ 0.28
KDM4B-206ENST00000588361 GJB7Q6PEY0 223 aa16.8■□□□□ 0.28
KDM4B-206ENST00000588361 ZIM3Q96PE6 472 aa16.8■□□□□ 0.28
KDM4B-206ENST00000588361 DHX36Q9H2U1 1008 aaKnown RBP16.8■□□□□ 0.28
KDM4B-206ENST00000588361 RGL1Q9NZL6 768 aa16.8■□□□□ 0.28
KDM4B-206ENST00000588361 SWAP70Q9UH65 585 aa16.8■□□□□ 0.28
KDM4B-206ENST00000588361 FAM153AQ9UHL3 310 aa16.8■□□□□ 0.28
KDM4B-206ENST00000588361 PCDHB13Q9Y5F0 798 aa16.8■□□□□ 0.28
KDM4B-206ENST00000588361 PCDHA2Q9Y5H9 948 aa16.8■□□□□ 0.28
KDM4B-206ENST00000588361 SSU72P8A0A1W2PR75 194 aa16.79■□□□□ 0.28
KDM4B-206ENST00000588361 HEXIM1O94992 359 aaKnown RBP16.79■□□□□ 0.28
KDM4B-206ENST00000588361 RDXP35241 583 aaKnown RBP16.79■□□□□ 0.28
KDM4B-206ENST00000588361 PTK2Q05397 1052 aa16.79■□□□□ 0.28
KDM4B-206ENST00000588361 PIGOQ8TEQ8 1089 aa16.79■□□□□ 0.28
KDM4B-206ENST00000588361 KCTD10Q9H3F6 313 aa16.79■□□□□ 0.28
KDM4B-206ENST00000588361 KDM3AQ9Y4C1 1321 aa16.79■□□□□ 0.28
KDM4B-206ENST00000588361 POLRMTO00411 1230 aaKnown RBP16.79■□□□□ 0.28
KDM4B-206ENST00000588361 GCFC2P16383 781 aaKnown RBP16.79■□□□□ 0.28
KDM4B-206ENST00000588361 ZNF76P36508 570 aa16.79■□□□□ 0.28
KDM4B-206ENST00000588361 UBXN2AP68543 259 aa16.79■□□□□ 0.28
KDM4B-206ENST00000588361 SEPT12Q8IYM1 358 aa16.79■□□□□ 0.28
KDM4B-206ENST00000588361 ZNF622Q969S3 477 aaKnown RBP eCLIP16.79■□□□□ 0.282e-6■■■□□ 17.6
KDM4B-206ENST00000588361 REEP2Q9BRK0 252 aa16.79■□□□□ 0.28
KDM4B-206ENST00000588361 BHMT2Q9H2M3 363 aa16.79■□□□□ 0.28
KDM4B-206ENST00000588361 ATF5Q9Y2D1 282 aaPredicted RBP16.79■□□□□ 0.28
KDM4B-206ENST00000588361 KCNK3O14649 394 aa16.78■□□□□ 0.28
KDM4B-206ENST00000588361 TRIM37O94972 964 aa16.78■□□□□ 0.28
KDM4B-206ENST00000588361 CRKP46108 304 aa16.78■□□□□ 0.28
KDM4B-206ENST00000588361 CASP4P49662 377 aa16.78■□□□□ 0.28
KDM4B-206ENST00000588361 HDLBPQ00341 1268 aaKnown RBP16.78■□□□□ 0.28
KDM4B-206ENST00000588361 SF3B2Q13435 895 aaKnown RBP16.78■□□□□ 0.28
KDM4B-206ENST00000588361 SLC18A3Q16572 532 aa16.78■□□□□ 0.28
KDM4B-206ENST00000588361 KSR1Q8IVT5 923 aa16.78■□□□□ 0.28
KDM4B-206ENST00000588361 ARMCX3Q9UH62 379 aaPredicted RBP16.78■□□□□ 0.28
KDM4B-206ENST00000588361 DNM3Q9UQ16 869 aa16.78■□□□□ 0.28
KDM4B-206ENST00000588361 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.78■□□□□ 0.28
KDM4B-206ENST00000588361 FAM86B1E9PN63 330 aa16.78■□□□□ 0.28
KDM4B-206ENST00000588361 MEIS2O14770 477 aa16.78■□□□□ 0.28
KDM4B-206ENST00000588361 ZBTB39O15060 712 aa16.78■□□□□ 0.28
KDM4B-206ENST00000588361 PJA2O43164 708 aa16.78■□□□□ 0.28
KDM4B-206ENST00000588361 FAM86B2P0C5J1 330 aa16.78■□□□□ 0.28
KDM4B-206ENST00000588361 PPP2R5AQ15172 486 aa16.78■□□□□ 0.28
KDM4B-206ENST00000588361 E2F5Q15329 346 aa16.78■□□□□ 0.28
KDM4B-206ENST00000588361 NAA35Q5VZE5 725 aa16.78■□□□□ 0.28
KDM4B-206ENST00000588361 PPP1R18Q6NYC8 613 aa16.78■□□□□ 0.28
KDM4B-206ENST00000588361 SP8Q8IXZ3 490 aa16.78■□□□□ 0.28
KDM4B-206ENST00000588361 SLC24A3Q9HC58 644 aa16.78■□□□□ 0.28
KDM4B-206ENST00000588361 ABCB11O95342 1321 aa16.78■□□□□ 0.28
KDM4B-206ENST00000588361 SPDYE3A6NKU9 549 aa16.78■□□□□ 0.28
KDM4B-206ENST00000588361 GCNT3O95395 438 aa16.78■□□□□ 0.28
KDM4B-206ENST00000588361 PRLRP16471 622 aa16.78■□□□□ 0.28
KDM4B-206ENST00000588361 LSP1P33241 339 aa16.78■□□□□ 0.28
KDM4B-206ENST00000588361 SLC12A3P55017 1021 aa16.78■□□□□ 0.28
KDM4B-206ENST00000588361 CEP63Q96MT8 703 aa16.78■□□□□ 0.28
KDM4B-206ENST00000588361 TMCO5BA8MYB1 307 aa16.77■□□□□ 0.28
KDM4B-206ENST00000588361 GOLGA8KD6RF30 607 aa16.77■□□□□ 0.28
KDM4B-206ENST00000588361 HSF2BPO75031 334 aa16.77■□□□□ 0.28
KDM4B-206ENST00000588361 HPDP32754 393 aaPredicted RBP16.77■□□□□ 0.28
KDM4B-206ENST00000588361 ICA1Q05084 483 aa16.77■□□□□ 0.28
KDM4B-206ENST00000588361 NAB2Q15742 525 aa16.77■□□□□ 0.28
KDM4B-206ENST00000588361 SPRED3Q2MJR0 410 aa16.77■□□□□ 0.28
KDM4B-206ENST00000588361 TRMT1LQ7Z2T5 733 aaKnown RBP16.77■□□□□ 0.28
KDM4B-206ENST00000588361 GJD4Q96KN9 370 aaPredicted RBP16.77■□□□□ 0.28
KDM4B-206ENST00000588361 CCDC43Q96MW1 224 aaKnown RBP16.77■□□□□ 0.28
KDM4B-206ENST00000588361 CRAMP1Q96RY5 1269 aa16.77■□□□□ 0.28
KDM4B-206ENST00000588361 KCNMB3Q9NPA1 279 aa16.77■□□□□ 0.28
KDM4B-206ENST00000588361 LUC7LQ9NQ29 371 aaKnown RBP16.77■□□□□ 0.28
KDM4B-206ENST00000588361 PPANQ9NQ55 473 aaKnown RBP16.77■□□□□ 0.28
KDM4B-206ENST00000588361 KLC4Q9NSK0 619 aa16.77■□□□□ 0.28
KDM4B-206ENST00000588361 COL24A1Q17RW2 1714 aa16.77■□□□□ 0.28
KDM4B-206ENST00000588361 F5H6K3 240 aa16.77■□□□□ 0.27
KDM4B-206ENST00000588361 HOXA10P31260 410 aaPredicted RBP16.77■□□□□ 0.27
KDM4B-206ENST00000588361 KLRC3Q07444 240 aa16.77■□□□□ 0.27
KDM4B-206ENST00000588361 GIT2Q14161 759 aa16.77■□□□□ 0.27
KDM4B-206ENST00000588361 ZNF571Q7Z3V5 609 aaPredicted RBP16.77■□□□□ 0.27
KDM4B-206ENST00000588361 AP1M1Q9BXS5 423 aa16.77■□□□□ 0.27
KDM4B-206ENST00000588361 BCS1LQ9Y276 419 aa16.77■□□□□ 0.27
KDM4B-206ENST00000588361 OPA1O60313 960 aa16.76■□□□□ 0.27
KDM4B-206ENST00000588361 PAX7P23759 505 aa16.76■□□□□ 0.27
KDM4B-206ENST00000588361 EPHB4P54760 987 aa16.76■□□□□ 0.27
KDM4B-206ENST00000588361 CTTNQ14247 550 aaKnown RBP16.76■□□□□ 0.27
KDM4B-206ENST00000588361 B4GALNT4Q76KP1 1039 aa16.76■□□□□ 0.27
KDM4B-206ENST00000588361 RNF10Q8N5U6 811 aaKnown RBP16.76■□□□□ 0.27
KDM4B-206ENST00000588361 PLIN4Q96Q06 1357 aa16.76■□□□□ 0.27
KDM4B-206ENST00000588361 GRID2IPA4D2P6 1211 aa16.76■□□□□ 0.27
KDM4B-206ENST00000588361 AKAP3O75969 853 aa16.76■□□□□ 0.27
KDM4B-206ENST00000588361 POLD1P28340 1107 aa16.76■□□□□ 0.27
KDM4B-206ENST00000588361 ELF1P32519 619 aa16.76■□□□□ 0.27
KDM4B-206ENST00000588361 PDE6BP35913 854 aa16.76■□□□□ 0.27
KDM4B-206ENST00000588361 HLTFQ14527 1009 aaKnown RBP eCLIP16.76■□□□□ 0.272e-6■■■□□ 14.9
KDM4B-206ENST00000588361 EXOC3L4Q17RC7 722 aa16.76■□□□□ 0.27
KDM4B-206ENST00000588361 MSL1Q68DK7 614 aa16.76■□□□□ 0.27
KDM4B-206ENST00000588361 RPAINQ86UA6 219 aa16.76■□□□□ 0.27
KDM4B-206ENST00000588361 SCLT1Q96NL6 688 aa16.76■□□□□ 0.27
KDM4B-206ENST00000588361 CEP104O60308 925 aa16.75■□□□□ 0.27
KDM4B-206ENST00000588361 GNA14O95837 355 aa16.75■□□□□ 0.27
KDM4B-206ENST00000588361 XRCC5P13010 732 aaKnown RBP16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms