RNA–Protein interactions for RNA: ENST00000562702.2

HDGFL3-202, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 449 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-202ENST00000562702 PHF20Q9BVI0 1012 aa5□□□□□ -1.61
HDGFL3-202ENST00000562702 ZDHHC5Q9C0B5 715 aa5□□□□□ -1.61
HDGFL3-202ENST00000562702 EPN3Q9H201 632 aa5□□□□□ -1.61
HDGFL3-202ENST00000562702 ACTR10Q9NZ32 417 aa5□□□□□ -1.61
HDGFL3-202ENST00000562702 MEOX1P50221 254 aa4.99□□□□□ -1.61
HDGFL3-202ENST00000562702 EPHA5P54756 1037 aa4.99□□□□□ -1.61
HDGFL3-202ENST00000562702 HNRNPA0Q13151 305 aaKnown RBP4.99□□□□□ -1.61
HDGFL3-202ENST00000562702 DUSP8Q13202 625 aa4.99□□□□□ -1.61
HDGFL3-202ENST00000562702 LARP1BQ659C4 914 aaKnown RBP4.99□□□□□ -1.61
HDGFL3-202ENST00000562702 ZNF662Q6ZS27 426 aa4.99□□□□□ -1.61
HDGFL3-202ENST00000562702 USP53Q70EK8 1073 aa4.99□□□□□ -1.61
HDGFL3-202ENST00000562702 ZNF627Q7L945 461 aa4.99□□□□□ -1.61
HDGFL3-202ENST00000562702 BUD13Q9BRD0 619 aaKnown RBP eCLIP4.99□□□□□ -1.61
HDGFL3-202ENST00000562702 SLC39A2Q9NP94 309 aa4.99□□□□□ -1.61
HDGFL3-202ENST00000562702 FOXN1O15353 648 aa4.98□□□□□ -1.61
HDGFL3-202ENST00000562702 RHOBTB3O94955 611 aa4.98□□□□□ -1.61
HDGFL3-202ENST00000562702 SSBP05455 408 aaKnown RBP eCLIP4.98□□□□□ -1.61
HDGFL3-202ENST00000562702 KCNQ1P51787 676 aa4.98□□□□□ -1.61
HDGFL3-202ENST00000562702 ARID5AQ03989 594 aa4.98□□□□□ -1.61
HDGFL3-202ENST00000562702 DBPQ10586 325 aaPredicted RBP4.98□□□□□ -1.61
HDGFL3-202ENST00000562702 LAIR1Q6GTX8 287 aa4.98□□□□□ -1.61
HDGFL3-202ENST00000562702 EP400NLQ6ZTU2 488 aa4.98□□□□□ -1.61
HDGFL3-202ENST00000562702 NLGN4XQ8N0W4 816 aa4.98□□□□□ -1.61
HDGFL3-202ENST00000562702 SLC43A3Q8NBI5 491 aa4.98□□□□□ -1.61
HDGFL3-202ENST00000562702 MPHOSPH9Q99550 1183 aa4.98□□□□□ -1.61
HDGFL3-202ENST00000562702 ZFYVE21Q9BQ24 234 aa4.98□□□□□ -1.61
HDGFL3-202ENST00000562702 PPARGC1AQ9UBK2 798 aaKnown RBP4.98□□□□□ -1.61
HDGFL3-202ENST00000562702 KRTAP23-1A1A580 65 aa4.97□□□□□ -1.61
HDGFL3-202ENST00000562702 FAM47E-STBD1D6RA91 191 aa4.97□□□□□ -1.61
HDGFL3-202ENST00000562702 MATN2O00339 956 aa4.97□□□□□ -1.61
HDGFL3-202ENST00000562702 FXNQ16595 210 aa4.97□□□□□ -1.61
HDGFL3-202ENST00000562702 CCDC142Q17RM4 750 aa4.97□□□□□ -1.61
HDGFL3-202ENST00000562702 LBX2Q6XYB7 198 aa4.97□□□□□ -1.61
HDGFL3-202ENST00000562702 DPH6Q7L8W6 267 aa4.97□□□□□ -1.61
HDGFL3-202ENST00000562702 EEPD1Q7L9B9 569 aa4.97□□□□□ -1.61
HDGFL3-202ENST00000562702 RTKN2Q8IZC4 609 aa4.97□□□□□ -1.61
HDGFL3-202ENST00000562702 ANKRD35Q8N283 1001 aa4.97□□□□□ -1.61
HDGFL3-202ENST00000562702 DCAF4Q8WV16 495 aa4.97□□□□□ -1.61
HDGFL3-202ENST00000562702 OR10A2Q9H208 303 aa4.97□□□□□ -1.61
HDGFL3-202ENST00000562702 SLC2A4RGQ9NR83 387 aa4.97□□□□□ -1.61
HDGFL3-202ENST00000562702 CEP72Q9P209 647 aa4.97□□□□□ -1.61
HDGFL3-202ENST00000562702 ACOT7O00154 380 aa4.96□□□□□ -1.62
HDGFL3-202ENST00000562702 NKRFO15226 690 aaKnown RBP eCLIP4.96□□□□□ -1.62
HDGFL3-202ENST00000562702 FGRP09769 529 aa4.96□□□□□ -1.62
HDGFL3-202ENST00000562702 FBLP22087 321 aaKnown RBP4.96□□□□□ -1.62
HDGFL3-202ENST00000562702 PTGS2P35354 604 aa4.96□□□□□ -1.62
HDGFL3-202ENST00000562702 MRPS21P82921 87 aaKnown RBP4.96□□□□□ -1.62
HDGFL3-202ENST00000562702 FSTL1Q12841 308 aa4.96□□□□□ -1.62
HDGFL3-202ENST00000562702 BTBD8Q5XKL5 378 aa4.96□□□□□ -1.62
HDGFL3-202ENST00000562702 PCSK4Q6UW60 755 aa4.96□□□□□ -1.62
HDGFL3-202ENST00000562702 OTOP2Q7RTS6 562 aa4.96□□□□□ -1.62
HDGFL3-202ENST00000562702 SHCBP1Q8NEM2 672 aa4.96□□□□□ -1.62
HDGFL3-202ENST00000562702 IER2Q9BTL4 223 aa4.96□□□□□ -1.62
HDGFL3-202ENST00000562702 KIAA1683Q9H0B3 1180 aa4.96□□□□□ -1.62
HDGFL3-202ENST00000562702 TELO2Q9Y4R8 837 aa4.96□□□□□ -1.62
HDGFL3-202ENST00000562702 PMS2P1A4D2B8 440 aa4.95□□□□□ -1.62
HDGFL3-202ENST00000562702 SMAD7O15105 426 aaKnown RBP4.95□□□□□ -1.62
HDGFL3-202ENST00000562702 SLC26A4O43511 780 aa4.95□□□□□ -1.62
HDGFL3-202ENST00000562702 MSCO60682 206 aa4.95□□□□□ -1.62
HDGFL3-202ENST00000562702 PPP2R2AP63151 447 aa4.95□□□□□ -1.62
HDGFL3-202ENST00000562702 CNGB1Q14028 1251 aaPredicted RBP4.95□□□□□ -1.62
HDGFL3-202ENST00000562702 RRP1BQ14684 758 aaKnown RBP4.95□□□□□ -1.62
HDGFL3-202ENST00000562702 EIF4HQ15056 248 aaKnown RBP4.95□□□□□ -1.62
HDGFL3-202ENST00000562702 HABP4Q5JVS0 413 aaKnown RBP4.95□□□□□ -1.62
HDGFL3-202ENST00000562702 MCF2L2Q86YR7 1114 aa4.95□□□□□ -1.62
HDGFL3-202ENST00000562702 IFNL3Q8IZI9 196 aa4.95□□□□□ -1.62
HDGFL3-202ENST00000562702 C8orf37Q96NL8 207 aa4.95□□□□□ -1.62
HDGFL3-202ENST00000562702 GMLQ99445 158 aa4.95□□□□□ -1.62
HDGFL3-202ENST00000562702 ALG1Q9BT22 464 aa4.95□□□□□ -1.62
HDGFL3-202ENST00000562702 INCENPQ9NQS7 918 aa4.95□□□□□ -1.62
HDGFL3-202ENST00000562702 RIC8BQ9NVN3 520 aa4.95□□□□□ -1.62
HDGFL3-202ENST00000562702 FAM184BQ9ULE4 1060 aa4.95□□□□□ -1.62
HDGFL3-202ENST00000562702 NUDT3O95989 172 aa4.94□□□□□ -1.62
HDGFL3-202ENST00000562702 SOD2P04179 222 aa4.94□□□□□ -1.62
HDGFL3-202ENST00000562702 PDE6AP16499 860 aa4.94□□□□□ -1.62
HDGFL3-202ENST00000562702 ADCY8P40145 1251 aa4.94□□□□□ -1.62
HDGFL3-202ENST00000562702 MRE11P49959 708 aa4.94□□□□□ -1.62
HDGFL3-202ENST00000562702 GPR85P60893 370 aa4.94□□□□□ -1.62
HDGFL3-202ENST00000562702 PCOLCEQ15113 449 aa4.94□□□□□ -1.62
HDGFL3-202ENST00000562702 TBR1Q16650 682 aa4.94□□□□□ -1.62
HDGFL3-202ENST00000562702 NAALADL2Q58DX5 795 aa4.94□□□□□ -1.62
HDGFL3-202ENST00000562702 LRCH2Q5VUJ6 765 aa4.94□□□□□ -1.62
HDGFL3-202ENST00000562702 PUM2Q8TB72 1066 aaKnown RBP eCLIP4.94□□□□□ -1.62
HDGFL3-202ENST00000562702 CFHR4Q92496 578 aa4.94□□□□□ -1.62
HDGFL3-202ENST00000562702 TMEM176AQ96HP8 235 aa4.94□□□□□ -1.62
HDGFL3-202ENST00000562702 GALNT8Q9NY28 637 aa4.94□□□□□ -1.62
HDGFL3-202ENST00000562702 PRKAG3Q9UGI9 489 aa4.94□□□□□ -1.62
HDGFL3-202ENST00000562702 MRVI1Q9Y6F6 885 aa4.94□□□□□ -1.62
HDGFL3-202ENST00000562702 B2RBV5 119 aa4.93□□□□□ -1.62
HDGFL3-202ENST00000562702 GCP02774 474 aa4.93□□□□□ -1.62
HDGFL3-202ENST00000562702 KRT4P19013 534 aa4.93□□□□□ -1.62
HDGFL3-202ENST00000562702 PTGS1P23219 599 aa4.93□□□□□ -1.62
HDGFL3-202ENST00000562702 GJA4P35212 333 aa4.93□□□□□ -1.62
HDGFL3-202ENST00000562702 GRIA2P42262 883 aa4.93□□□□□ -1.62
HDGFL3-202ENST00000562702 HSP90AA2PQ14568 343 aaPredicted RBP4.93□□□□□ -1.62
HDGFL3-202ENST00000562702 LARP4Q71RC2 724 aaKnown RBP eCLIP4.93□□□□□ -1.62
HDGFL3-202ENST00000562702 FILIP1Q7Z7B0 1213 aa4.93□□□□□ -1.62
HDGFL3-202ENST00000562702 GPR135Q8IZ08 494 aa4.93□□□□□ -1.62
HDGFL3-202ENST00000562702 OR14K1Q8NGZ2 314 aa4.93□□□□□ -1.62
HDGFL3-202ENST00000562702 CD244Q9BZW8 370 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms