RNA–Protein interactions for RNA: ENST00000533249.5

PKP3-210, Transcript of plakophilin 3, humanhuman

TSL 3

Gene PKP3, Length 1,111 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-210ENST00000533249 PLA2G5P39877 138 aa26.05■■□□□ 1.76
PKP3-210ENST00000533249 ZNF689Q96CS4 500 aaPredicted RBP26.05■■□□□ 1.76
PKP3-210ENST00000533249 FAM122AQ96E09 287 aa26.05■■□□□ 1.76
PKP3-210ENST00000533249 LMAN2LQ9H0V9 348 aa26.05■■□□□ 1.76
PKP3-210ENST00000533249 C11orf16Q9NQ32 467 aa26.05■■□□□ 1.76
PKP3-210ENST00000533249 BARHL2Q9NY43 387 aa26.05■■□□□ 1.76
PKP3-210ENST00000533249 PCDHA2Q9Y5H9 948 aa26.05■■□□□ 1.76
PKP3-210ENST00000533249 LOXHD1Q8IVV2 1947 aa26.05■■□□□ 1.76
PKP3-210ENST00000533249 POTEB3A0JP26 581 aa26.04■■□□□ 1.76
PKP3-210ENST00000533249 PI4K2BG5E9Z4 385 aa26.04■■□□□ 1.76
PKP3-210ENST00000533249 hCG_1984214I3L0E3 225 aa26.04■■□□□ 1.76
PKP3-210ENST00000533249 MEIS1O00470 390 aa26.04■■□□□ 1.76
PKP3-210ENST00000533249 SREBF1P36956 1147 aa26.04■■□□□ 1.76
PKP3-210ENST00000533249 AP3B2Q13367 1082 aa26.04■■□□□ 1.76
PKP3-210ENST00000533249 POTEBQ6S5H4 581 aa26.04■■□□□ 1.76
PKP3-210ENST00000533249 RTN4RL1Q86UN2 441 aaPredicted RBP26.04■■□□□ 1.76
PKP3-210ENST00000533249 ZNF713Q8N859 430 aaPredicted RBP26.04■■□□□ 1.76
PKP3-210ENST00000533249 CLP1Q92989 425 aaKnown RBP26.04■■□□□ 1.76
PKP3-210ENST00000533249 PADI3Q9ULW8 664 aa26.04■■□□□ 1.76
PKP3-210ENST00000533249 SQORQ9Y6N5 450 aa26.04■■□□□ 1.76
PKP3-210ENST00000533249 BACH1O14867 736 aa26.03■■□□□ 1.76
PKP3-210ENST00000533249 GPR37L1O60883 481 aa26.03■■□□□ 1.76
PKP3-210ENST00000533249 CDC27P30260 824 aa26.03■■□□□ 1.76
PKP3-210ENST00000533249 PAK2Q13177 524 aa26.03■■□□□ 1.76
PKP3-210ENST00000533249 TEX2Q8IWB9 1127 aa26.03■■□□□ 1.76
PKP3-210ENST00000533249 FTHL17Q9BXU8 183 aa26.03■■□□□ 1.76
PKP3-210ENST00000533249 CELF4Q9BZC1 486 aaKnown RBP26.03■■□□□ 1.76
PKP3-210ENST00000533249 FAM217BQ9NTX9 383 aaPredicted RBP26.03■■□□□ 1.76
PKP3-210ENST00000533249 SMIM35A0A1B0GVV1 85 aa26.02■■□□□ 1.76
PKP3-210ENST00000533249 ATG7O95352 703 aa26.02■■□□□ 1.76
PKP3-210ENST00000533249 CCNE2O96020 404 aa26.02■■□□□ 1.76
PKP3-210ENST00000533249 IBSPP21815 317 aaPredicted RBP26.02■■□□□ 1.76
PKP3-210ENST00000533249 CLK2P49760 499 aaKnown RBP26.02■■□□□ 1.76
PKP3-210ENST00000533249 COL19A1Q14993 1142 aa26.02■■□□□ 1.76
PKP3-210ENST00000533249 JAKMIP3Q5VZ66 844 aa26.02■■□□□ 1.76
PKP3-210ENST00000533249 MTHFD1LQ6UB35 978 aa26.02■■□□□ 1.76
PKP3-210ENST00000533249 NPAS4Q8IUM7 802 aa26.02■■□□□ 1.76
PKP3-210ENST00000533249 UIMC1Q96RL1 719 aa26.02■■□□□ 1.76
PKP3-210ENST00000533249 GLT8D2Q9H1C3 349 aa26.02■■□□□ 1.76
PKP3-210ENST00000533249 ALG13Q9NP73 1137 aaKnown RBP26.02■■□□□ 1.76
PKP3-210ENST00000533249 HCN4Q9Y3Q4 1203 aa26.02■■□□□ 1.76
PKP3-210ENST00000533249 MRPL42Q9Y6G3 142 aaKnown RBP26.02■■□□□ 1.76
PKP3-210ENST00000533249 IGSF9BQ9UPX0 1349 aa26.02■■□□□ 1.76
PKP3-210ENST00000533249 FGD1P98174 961 aa26.01■■□□□ 1.75
PKP3-210ENST00000533249 KRT76Q01546 638 aa26.01■■□□□ 1.75
PKP3-210ENST00000533249 HYAL1Q12794 435 aa26.01■■□□□ 1.75
PKP3-210ENST00000533249 KRT32Q14532 448 aa26.01■■□□□ 1.75
PKP3-210ENST00000533249 TMEM266Q2M3C6 531 aa26.01■■□□□ 1.75
PKP3-210ENST00000533249 TSGA10IPQ3SY00 556 aa26.01■■□□□ 1.75
PKP3-210ENST00000533249 PAN2Q504Q3 1202 aaKnown RBP26.01■■□□□ 1.75
PKP3-210ENST00000533249 PLA2G4DQ86XP0 818 aa26.01■■□□□ 1.75
PKP3-210ENST00000533249 FAM50BQ9Y247 325 aa26.01■■□□□ 1.75
PKP3-210ENST00000533249 GINS2Q9Y248 185 aa26.01■■□□□ 1.75
PKP3-210ENST00000533249 KLRC1P26715 233 aa26■■□□□ 1.75
PKP3-210ENST00000533249 SLC26A2P50443 739 aa26■■□□□ 1.75
PKP3-210ENST00000533249 FAM160B1Q5W0V3 765 aa26■■□□□ 1.75
PKP3-210ENST00000533249 ABHD15Q6UXT9 468 aa26■■□□□ 1.75
PKP3-210ENST00000533249 NIPA1Q7RTP0 329 aa26■■□□□ 1.75
PKP3-210ENST00000533249 CMTR2Q8IYT2 770 aaKnown RBP26■■□□□ 1.75
PKP3-210ENST00000533249 PLVAPQ9BX97 442 aa26■■□□□ 1.75
PKP3-210ENST00000533249 IGFLR1Q9H665 355 aa26■■□□□ 1.75
PKP3-210ENST00000533249 IGKV6D-21A0A0A0MT36 114 aa25.99■■□□□ 1.75
PKP3-210ENST00000533249 FAM86B1E9PN63 330 aa25.99■■□□□ 1.75
PKP3-210ENST00000533249 NCK2O43639 380 aa25.99■■□□□ 1.75
PKP3-210ENST00000533249 HBP1O60381 514 aa25.99■■□□□ 1.75
PKP3-210ENST00000533249 CDC45O75419 566 aa25.99■■□□□ 1.75
PKP3-210ENST00000533249 MMP1P03956 469 aa25.99■■□□□ 1.75
PKP3-210ENST00000533249 FAM86B2P0C5J1 330 aa25.99■■□□□ 1.75
PKP3-210ENST00000533249 STAG3L1P0CL83 205 aa25.99■■□□□ 1.75
PKP3-210ENST00000533249 SCG2P13521 617 aa25.99■■□□□ 1.75
PKP3-210ENST00000533249 CPA1P15085 419 aa25.99■■□□□ 1.75
PKP3-210ENST00000533249 ADD1P35611 737 aaKnown RBP25.99■■□□□ 1.75
PKP3-210ENST00000533249 LTBRP36941 435 aa25.99■■□□□ 1.75
PKP3-210ENST00000533249 NFX1Q12986 1120 aaKnown RBP25.99■■□□□ 1.75
PKP3-210ENST00000533249 CLUL1Q15846 466 aa25.99■■□□□ 1.75
PKP3-210ENST00000533249 CENPQQ7L2Z9 268 aaPredicted RBP25.99■■□□□ 1.75
PKP3-210ENST00000533249 CCDC60Q8IWA6 550 aaPredicted RBP25.99■■□□□ 1.75
PKP3-210ENST00000533249 CRIPAKQ8N1N5 446 aa25.99■■□□□ 1.75
PKP3-210ENST00000533249 NME8Q8N427 588 aa25.99■■□□□ 1.75
PKP3-210ENST00000533249 PLAGL2Q9UPG8 496 aa25.99■■□□□ 1.75
PKP3-210ENST00000533249 KIAA1671Q9BY89 1806 aa25.99■■□□□ 1.75
PKP3-210ENST00000533249 KDM3AQ9Y4C1 1321 aa25.98■■□□□ 1.75
PKP3-210ENST00000533249 GTF2F1P35269 517 aaKnown RBP eCLIP25.98■■□□□ 1.75
PKP3-210ENST00000533249 GATMP50440 423 aa25.98■■□□□ 1.75
PKP3-210ENST00000533249 METAP2P50579 478 aaKnown RBP eCLIP25.98■■□□□ 1.759e-6■□□□□ 8.1
PKP3-210ENST00000533249 APOBRQ0VD83 1088 aa25.98■■□□□ 1.75
PKP3-210ENST00000533249 PFKFB3Q16875 520 aaPredicted RBP25.98■■□□□ 1.75
PKP3-210ENST00000533249 PDXDC2PQ6P474 469 aa25.98■■□□□ 1.75
PKP3-210ENST00000533249 ATP8B4Q8TF62 1192 aa25.98■■□□□ 1.75
PKP3-210ENST00000533249 TMX1Q9H3N1 280 aa25.98■■□□□ 1.75
PKP3-210ENST00000533249 ZNF302Q9NR11 478 aa25.98■■□□□ 1.75
PKP3-210ENST00000533249 LRFN2Q9ULH4 789 aa25.98■■□□□ 1.75
PKP3-210ENST00000533249 HMGB1P09429 215 aaKnown RBP25.97■■□□□ 1.75
PKP3-210ENST00000533249 RCAN1P53805 252 aa25.97■■□□□ 1.75
PKP3-210ENST00000533249 DLX2Q07687 328 aaPredicted RBP25.97■■□□□ 1.75
PKP3-210ENST00000533249 CTC1Q2NKJ3 1217 aa25.97■■□□□ 1.75
PKP3-210ENST00000533249 SWSAP1Q6NVH7 229 aa25.97■■□□□ 1.75
PKP3-210ENST00000533249 MIS18BP1Q6P0N0 1132 aa25.97■■□□□ 1.75
PKP3-210ENST00000533249 P2RX5Q93086 422 aa25.97■■□□□ 1.75
PKP3-210ENST00000533249 IGLV3-22A0A075B6J6 115 aa25.96■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms