RNA–Protein interactions for RNA: ENST00000523068.1

PVT1-216, Transcript of Pvt1 oncogene, humanhuman

TSL 5 BASIC

Gene PVT1, Length 844 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-216ENST00000523068 PCDHA4Q9UN74 947 aa12.36□□□□□ -0.43
PVT1-216ENST00000523068 PCDHA2Q9Y5H9 948 aa12.36□□□□□ -0.43
PVT1-216ENST00000523068 SQORQ9Y6N5 450 aa12.36□□□□□ -0.43
PVT1-216ENST00000523068 COL4A6Q14031 1691 aa12.35□□□□□ -0.43
PVT1-216ENST00000523068 COL1A2P08123 1366 aa12.35□□□□□ -0.43
PVT1-216ENST00000523068 SMIM35A0A1B0GVV1 85 aa12.35□□□□□ -0.43
PVT1-216ENST00000523068 LINC01553A4QN01 128 aa12.35□□□□□ -0.43
PVT1-216ENST00000523068 HBP1O60381 514 aa12.35□□□□□ -0.43
PVT1-216ENST00000523068 ARHGEF15O94989 841 aa12.35□□□□□ -0.43
PVT1-216ENST00000523068 CCNE2O96020 404 aa12.35□□□□□ -0.43
PVT1-216ENST00000523068 PSAPP07602 524 aa12.35□□□□□ -0.43
PVT1-216ENST00000523068 GHRP10912 638 aa12.35□□□□□ -0.43
PVT1-216ENST00000523068 ERVK-21P61565 698 aa12.35□□□□□ -0.43
PVT1-216ENST00000523068 HTRA4P83105 476 aaPredicted RBP12.35□□□□□ -0.43
PVT1-216ENST00000523068 STK3Q13188 491 aa12.35□□□□□ -0.43
PVT1-216ENST00000523068 ANKRD1Q15327 319 aa12.35□□□□□ -0.43
PVT1-216ENST00000523068 PRR16Q569H4 304 aa12.35□□□□□ -0.43
PVT1-216ENST00000523068 TJAP1Q5JTD0 557 aa12.35□□□□□ -0.43
PVT1-216ENST00000523068 GALNT17Q6IS24 598 aa12.35□□□□□ -0.43
PVT1-216ENST00000523068 PDXDC2PQ6P474 469 aa12.35□□□□□ -0.43
PVT1-216ENST00000523068 TSHZ1Q6ZSZ6 1077 aa12.35□□□□□ -0.43
PVT1-216ENST00000523068 MICALL1Q8N3F8 863 aa12.35□□□□□ -0.43
PVT1-216ENST00000523068 NME8Q8N427 588 aa12.35□□□□□ -0.43
PVT1-216ENST00000523068 RASGRP4Q8TDF6 673 aa12.35□□□□□ -0.43
PVT1-216ENST00000523068 ATP8B4Q8TF62 1192 aa12.35□□□□□ -0.43
PVT1-216ENST00000523068 FAM49AQ9H0Q0 323 aaPredicted RBP12.35□□□□□ -0.43
PVT1-216ENST00000523068 TSHZ2Q9NRE2 1034 aa12.35□□□□□ -0.43
PVT1-216ENST00000523068 MTCH2Q9Y6C9 303 aa12.35□□□□□ -0.43
PVT1-216ENST00000523068 CDY2AQ9Y6F7 541 aa12.35□□□□□ -0.43
PVT1-216ENST00000523068 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.34□□□□□ -0.43
PVT1-216ENST00000523068 EPOPA6NHQ4 379 aa12.34□□□□□ -0.43
PVT1-216ENST00000523068 RFXAPO00287 272 aa12.34□□□□□ -0.43
PVT1-216ENST00000523068 ADAMTS3O15072 1205 aa12.34□□□□□ -0.43
PVT1-216ENST00000523068 UPP2O95045 317 aa12.34□□□□□ -0.43
PVT1-216ENST00000523068 XBP1P17861 261 aa12.34□□□□□ -0.43
PVT1-216ENST00000523068 GRB10Q13322 594 aa12.34□□□□□ -0.43
PVT1-216ENST00000523068 LPIN1Q14693 890 aa12.34□□□□□ -0.43
PVT1-216ENST00000523068 ZNF484Q5JVG2 852 aa12.34□□□□□ -0.43
PVT1-216ENST00000523068 FBXO47Q5MNV8 452 aa12.34□□□□□ -0.43
PVT1-216ENST00000523068 SWSAP1Q6NVH7 229 aa12.34□□□□□ -0.43
PVT1-216ENST00000523068 MTHFD1LQ6UB35 978 aa12.34□□□□□ -0.43
PVT1-216ENST00000523068 CCDC60Q8IWA6 550 aaPredicted RBP12.34□□□□□ -0.43
PVT1-216ENST00000523068 CKAP2LQ8IYA6 745 aa12.34□□□□□ -0.43
PVT1-216ENST00000523068 BLIDQ8IZY5 108 aa12.34□□□□□ -0.43
PVT1-216ENST00000523068 SAMD11Q96NU1 681 aa12.34□□□□□ -0.43
PVT1-216ENST00000523068 YME1L1Q96TA2 773 aa12.34□□□□□ -0.43
PVT1-216ENST00000523068 LARP6Q9BRS8 491 aaKnown RBP12.34□□□□□ -0.43
PVT1-216ENST00000523068 FTHL17Q9BXU8 183 aa12.34□□□□□ -0.43
PVT1-216ENST00000523068 OSBPL7Q9BZF2 842 aa12.34□□□□□ -0.43
PVT1-216ENST00000523068 SLKQ9H2G2 1235 aaPredicted RBP12.34□□□□□ -0.43
PVT1-216ENST00000523068 LMCD1Q9NZU5 365 aa12.34□□□□□ -0.43
PVT1-216ENST00000523068 SAMM50Q9Y512 469 aa12.34□□□□□ -0.43
PVT1-216ENST00000523068 PCDHA10Q9Y5I2 948 aa12.34□□□□□ -0.43
PVT1-216ENST00000523068 TRPV2Q9Y5S1 764 aa12.34□□□□□ -0.43
PVT1-216ENST00000523068 WDR64B1ANS9 1081 aa12.33□□□□□ -0.44
PVT1-216ENST00000523068 MRPS5P82675 430 aaKnown RBP12.33□□□□□ -0.44
PVT1-216ENST00000523068 SKIV2LQ15477 1246 aaKnown RBP12.33□□□□□ -0.44
PVT1-216ENST00000523068 FAM43BQ6ZT52 329 aaPredicted RBP12.33□□□□□ -0.44
PVT1-216ENST00000523068 DAGLBQ8NCG7 672 aa12.33□□□□□ -0.44
PVT1-216ENST00000523068 IL27Q8NEV9 243 aa12.33□□□□□ -0.44
PVT1-216ENST00000523068 SP7Q8TDD2 431 aaPredicted RBP12.33□□□□□ -0.44
PVT1-216ENST00000523068 TBCKQ8TEA7 893 aa12.33□□□□□ -0.44
PVT1-216ENST00000523068 TRAPPC12Q8WVT3 735 aa12.33□□□□□ -0.44
PVT1-216ENST00000523068 BBXQ8WY36 941 aaPredicted RBP12.33□□□□□ -0.44
PVT1-216ENST00000523068 LENG9Q96B70 501 aa12.33□□□□□ -0.44
PVT1-216ENST00000523068 FAM167AQ96KS9 214 aa12.33□□□□□ -0.44
PVT1-216ENST00000523068 RIT2Q99578 217 aa12.33□□□□□ -0.44
PVT1-216ENST00000523068 PRDM6Q9NQX0 595 aa12.33□□□□□ -0.44
PVT1-216ENST00000523068 MTUS1Q9ULD2 1270 aa12.33□□□□□ -0.44
PVT1-216ENST00000523068 CEP131Q9UPN4 1083 aa12.33□□□□□ -0.44
PVT1-216ENST00000523068 MAFBQ9Y5Q3 323 aaPredicted RBP12.33□□□□□ -0.44
PVT1-216ENST00000523068 REV3LO60673 3130 aa12.33□□□□□ -0.44
PVT1-216ENST00000523068 TTC3P53804 2025 aa12.33□□□□□ -0.44
PVT1-216ENST00000523068 STK36Q9NRP7 1315 aa12.33□□□□□ -0.44
PVT1-216ENST00000523068 KDM3AQ9Y4C1 1321 aa12.33□□□□□ -0.44
PVT1-216ENST00000523068 PRRC2BQ5JSZ5 2229 aaKnown RBP12.32□□□□□ -0.44
PVT1-216ENST00000523068 LPXNO60711 386 aa12.32□□□□□ -0.44
PVT1-216ENST00000523068 PFKFB2O60825 505 aa12.32□□□□□ -0.44
PVT1-216ENST00000523068 KLRC1P26715 233 aa12.32□□□□□ -0.44
PVT1-216ENST00000523068 SFNP31947 248 aa12.32□□□□□ -0.44
PVT1-216ENST00000523068 SCRN1Q12765 414 aa12.32□□□□□ -0.44
PVT1-216ENST00000523068 AAK1Q2M2I8 961 aa12.32□□□□□ -0.44
PVT1-216ENST00000523068 Q4G0T1 1027 aa12.32□□□□□ -0.44
PVT1-216ENST00000523068 ODR4Q5SWX8 454 aa12.32□□□□□ -0.44
PVT1-216ENST00000523068 KRT25Q7Z3Z0 450 aa12.32□□□□□ -0.44
PVT1-216ENST00000523068 SPRED2Q7Z698 418 aa12.32□□□□□ -0.44
PVT1-216ENST00000523068 FBXO22Q8NEZ5 403 aa12.32□□□□□ -0.44
PVT1-216ENST00000523068 GDPD5Q8WTR4 605 aa12.32□□□□□ -0.44
PVT1-216ENST00000523068 ZBTB10Q96DT7 871 aa12.32□□□□□ -0.44
PVT1-216ENST00000523068 ASB2Q96Q27 587 aa12.32□□□□□ -0.44
PVT1-216ENST00000523068 UIMC1Q96RL1 719 aa12.32□□□□□ -0.44
PVT1-216ENST00000523068 TEKT3Q9BXF9 490 aa12.32□□□□□ -0.44
PVT1-216ENST00000523068 CELF4Q9BZC1 486 aaKnown RBP12.32□□□□□ -0.44
PVT1-216ENST00000523068 SUGCTQ9HAC7 445 aa12.32□□□□□ -0.44
PVT1-216ENST00000523068 GABBR1Q9UBS5 961 aa12.32□□□□□ -0.44
PVT1-216ENST00000523068 IGSF9BQ9UPX0 1349 aa12.32□□□□□ -0.44
PVT1-216ENST00000523068 CYP3A7-CYP3A51PA0A087WV96 503 aa12.31□□□□□ -0.44
PVT1-216ENST00000523068 M0R2N6 131 aa12.31□□□□□ -0.44
PVT1-216ENST00000523068 ENPP3O14638 875 aa12.31□□□□□ -0.44
PVT1-216ENST00000523068 MSH4O15457 936 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms