RNA–Protein interactions for RNA: ENST00000523068.1

PVT1-216, Transcript of Pvt1 oncogene, humanhuman

TSL 5 BASIC

Gene PVT1, Length 844 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-216ENST00000523068 HNRNPLP14866 589 aaKnown RBP eCLIP11.39□□□□□ -0.596e-25■■■□□ 16
PVT1-216ENST00000523068 EIF3HO15372 352 aaKnown RBP eCLIP10.31□□□□□ -0.763e-12■■■■■ 53.6
PVT1-216ENST00000523068 HLTFQ14527 1009 aaKnown RBP eCLIP10.85□□□□□ -0.672e-11■□□□□ 9.4
PVT1-216ENST00000523068 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.34□□□□□ -0.913e-11■■□□□ 11.9
PVT1-216ENST00000523068 NOLC1Q14978 699 aaKnown RBP eCLIP11.93□□□□□ -0.56e-11■■■■□ 21.2
PVT1-216ENST00000523068 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.6□□□□□ -0.391e-10■□□□□ 10.1
PVT1-216ENST00000523068 SRSF7Q16629 238 aaKnown RBP eCLIP8.49□□□□□ -1.053e-10■■■■■ 33.8
PVT1-216ENST00000523068 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.3□□□□□ -0.283e-9■■■■□ 25.5
PVT1-216ENST00000523068 PRPF4O43172 522 aaKnown RBP eCLIP10.41□□□□□ -0.748e-9■■■□□ 16.1
PVT1-216ENST00000523068 RBM15Q96T37 977 aaKnown RBP eCLIP10.92□□□□□ -0.661e-8■■■■□ 24.6
PVT1-216ENST00000523068 ILF3Q12906 894 aaKnown RBP eCLIP10.87□□□□□ -0.676e-8■■■□□ 15.7
PVT1-216ENST00000523068 U2AF2P26368 475 aaKnown RBP eCLIP12.1□□□□□ -0.472e-7■■□□□ 11.9
PVT1-216ENST00000523068 PTBP1P26599 531 aaKnown RBP eCLIP8.67□□□□□ -1.022e-7■■■■■ 36
PVT1-216ENST00000523068 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.53□□□□□ -0.562e-7■■■■■ 61.4
PVT1-216ENST00000523068 XRCC6P12956 609 aaKnown RBP eCLIP12.14□□□□□ -0.472e-7■■■■□ 23.7
PVT1-216ENST00000523068 PPIGQ13427 754 aaKnown RBP eCLIP12.65□□□□□ -0.383e-7■■□□□ 14.2
PVT1-216ENST00000523068 MATR3P43243 847 aaKnown RBP eCLIP11.92□□□□□ -0.54e-7■□□□□ 10.6
PVT1-216ENST00000523068 HNRNPKP61978 463 aaKnown RBP eCLIP11.03□□□□□ -0.645e-7■■■□□ 15.8
PVT1-216ENST00000523068 HNRNPCP07910 306 aaKnown RBP eCLIP8.35□□□□□ -1.076e-7■□□□□ 9.6
PVT1-216ENST00000523068 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.89□□□□□ -0.516e-7■■■■□ 24.2
PVT1-216ENST00000523068 HNRNPMP52272 730 aaKnown RBP eCLIP17.3■□□□□ 0.366e-7■■■□□ 17.4
PVT1-216ENST00000523068 NKRFO15226 690 aaKnown RBP eCLIP12.69□□□□□ -0.388e-7■■□□□ 12.5
PVT1-216ENST00000523068 DKC1O60832 514 aaKnown RBP eCLIP12.26□□□□□ -0.458e-7■■■■■ 28.2
PVT1-216ENST00000523068 QKIQ96PU8 341 aaKnown RBP eCLIP10.78□□□□□ -0.689e-7■■■□□ 15
PVT1-216ENST00000523068 TARDBPQ13148 414 aaKnown RBP eCLIP10.98□□□□□ -0.651e-6■■■■□ 23.1
PVT1-216ENST00000523068 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.89□□□□□ -0.031e-6■□□□□ 11.1
PVT1-216ENST00000523068 HNRNPUQ00839 825 aaKnown RBP eCLIP13.59□□□□□ -0.231e-6■■■■□ 21.2
PVT1-216ENST00000523068 RBFOX2O43251 390 aaKnown RBP eCLIP8.33□□□□□ -1.081e-6■■■■□ 26.2
PVT1-216ENST00000523068 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.04□□□□□ -0.641e-6■□□□□ 9.2
PVT1-216ENST00000523068 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.78■□□□□ 0.282e-6■□□□□ 10.8
PVT1-216ENST00000523068 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.63□□□□□ -0.712e-6■■■■□ 20.7
PVT1-216ENST00000523068 TIAL1Q01085 375 aaKnown RBP eCLIP10.36□□□□□ -0.752e-6■■■■□ 22.9
PVT1-216ENST00000523068 PCBP2Q15366 365 aaKnown RBP eCLIP10.15□□□□□ -0.783e-6■■■□□ 19
PVT1-216ENST00000523068 EIF4G2P78344 907 aaKnown RBP eCLIP15.12■□□□□ 0.013e-6■■■■■ 29.6
PVT1-216ENST00000523068 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.78□□□□□ -0.684e-6■□□□□ 11.2
PVT1-216ENST00000523068 SRSF9Q13242 221 aaKnown RBP eCLIP6.75□□□□□ -1.334e-6■■■■□ 20.8
PVT1-216ENST00000523068 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.03□□□□□ -0.324e-6■■■□□ 17.4
PVT1-216ENST00000523068 SFPQP23246 707 aaKnown RBP eCLIP12.2□□□□□ -0.466e-6■■□□□ 14.5
PVT1-216ENST00000523068 SF3B1O75533 1304 aaKnown RBP eCLIP11.98□□□□□ -0.497e-6■■■■■ 104.3
PVT1-216ENST00000523068 TAF15Q92804 592 aaKnown RBP eCLIP8.92□□□□□ -0.988e-6■□□□□ 10.8
PVT1-216ENST00000523068 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.21□□□□□ -0.771e-5■□□□□ 9.3
Retrieved 41 of 41 RNA–protein pairs in 17.6 ms