RNA–Protein interactions for RNA: ENST00000483021.5

R3HDM1-215, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-215ENST00000483021 BRF1Q92994 677 aa22.17■■□□□ 1.14
R3HDM1-215ENST00000483021 ZMYND12Q9H0C1 365 aa22.17■■□□□ 1.14
R3HDM1-215ENST00000483021 RC3H2Q9HBD1 1191 aaKnown RBP22.17■■□□□ 1.14
R3HDM1-215ENST00000483021 C6orf50Q9HD87 102 aa22.17■■□□□ 1.14
R3HDM1-215ENST00000483021 COL1A2P08123 1366 aa22.16■■□□□ 1.14
R3HDM1-215ENST00000483021 IGSF9BQ9UPX0 1349 aa22.16■■□□□ 1.14
R3HDM1-215ENST00000483021 KDM3AQ9Y4C1 1321 aa22.16■■□□□ 1.14
R3HDM1-215ENST00000483021 FAM86B1E9PN63 330 aa22.16■■□□□ 1.14
R3HDM1-215ENST00000483021 C5orf67F2Z3F1 127 aa22.16■■□□□ 1.14
R3HDM1-215ENST00000483021 BACH1O14867 736 aa22.16■■□□□ 1.14
R3HDM1-215ENST00000483021 RB1P06400 928 aa22.16■■□□□ 1.14
R3HDM1-215ENST00000483021 FAM86B2P0C5J1 330 aa22.16■■□□□ 1.14
R3HDM1-215ENST00000483021 GNA11P29992 359 aa22.16■■□□□ 1.14
R3HDM1-215ENST00000483021 CD52P31358 61 aa22.16■■□□□ 1.14
R3HDM1-215ENST00000483021 CTNNB1P35222 781 aa22.16■■□□□ 1.14
R3HDM1-215ENST00000483021 LEXMQ3ZCV2 418 aa22.16■■□□□ 1.14
R3HDM1-215ENST00000483021 FAM43BQ6ZT52 329 aaPredicted RBP22.16■■□□□ 1.14
R3HDM1-215ENST00000483021 NME8Q8N427 588 aa22.16■■□□□ 1.14
R3HDM1-215ENST00000483021 BANK1Q8NDB2 785 aa22.16■■□□□ 1.14
R3HDM1-215ENST00000483021 CRYGNQ8WXF5 182 aa22.16■■□□□ 1.14
R3HDM1-215ENST00000483021 C11orf84Q9BUA3 381 aaPredicted RBP22.16■■□□□ 1.14
R3HDM1-215ENST00000483021 C1QTNF1Q9BXJ1 281 aa22.16■■□□□ 1.14
R3HDM1-215ENST00000483021 SNX14Q9Y5W7 946 aa22.16■■□□□ 1.14
R3HDM1-215ENST00000483021 EVPLQ92817 2033 aa22.15■■□□□ 1.14
R3HDM1-215ENST00000483021 DDX39AO00148 427 aaKnown RBP22.15■■□□□ 1.14
R3HDM1-215ENST00000483021 PRPF3O43395 683 aaKnown RBP22.15■■□□□ 1.14
R3HDM1-215ENST00000483021 HBP1O60381 514 aa22.15■■□□□ 1.14
R3HDM1-215ENST00000483021 REC8O95072 547 aa22.15■■□□□ 1.14
R3HDM1-215ENST00000483021 CPA1P15085 419 aa22.15■■□□□ 1.14
R3HDM1-215ENST00000483021 AKAP17AQ02040 695 aaKnown RBP22.15■■□□□ 1.14
R3HDM1-215ENST00000483021 MIS18BP1Q6P0N0 1132 aa22.15■■□□□ 1.14
R3HDM1-215ENST00000483021 MTHFD1LQ6UB35 978 aa22.15■■□□□ 1.14
R3HDM1-215ENST00000483021 ABHD15Q6UXT9 468 aa22.15■■□□□ 1.14
R3HDM1-215ENST00000483021 ATP8B4Q8TF62 1192 aa22.15■■□□□ 1.14
R3HDM1-215ENST00000483021 TRAPPC12Q8WVT3 735 aa22.15■■□□□ 1.14
R3HDM1-215ENST00000483021 ZBTB10Q96DT7 871 aa22.15■■□□□ 1.14
R3HDM1-215ENST00000483021 LMAN2LQ9H0V9 348 aa22.15■■□□□ 1.14
R3HDM1-215ENST00000483021 NSUN3Q9H649 340 aaKnown RBP22.15■■□□□ 1.14
R3HDM1-215ENST00000483021 AGO3Q9H9G7 860 aaKnown RBP22.15■■□□□ 1.14
R3HDM1-215ENST00000483021 TCEAL9Q9UHQ7 104 aa22.15■■□□□ 1.14
R3HDM1-215ENST00000483021 WDR81Q562E7 1941 aa22.15■■□□□ 1.14
R3HDM1-215ENST00000483021 KIAA1671Q9BY89 1806 aa22.15■■□□□ 1.14
R3HDM1-215ENST00000483021 IGLV3-22A0A075B6J6 115 aa22.14■■□□□ 1.13
R3HDM1-215ENST00000483021 IPO5O00410 1097 aaKnown RBP22.14■■□□□ 1.13
R3HDM1-215ENST00000483021 CCNE2O96020 404 aa22.14■■□□□ 1.13
R3HDM1-215ENST00000483021 COL9A1P20849 921 aa22.14■■□□□ 1.13
R3HDM1-215ENST00000483021 KCNA5P22460 613 aa22.14■■□□□ 1.13
R3HDM1-215ENST00000483021 RPS6KB1P23443 525 aa22.14■■□□□ 1.13
R3HDM1-215ENST00000483021 PSMA5P28066 241 aa22.14■■□□□ 1.13
R3HDM1-215ENST00000483021 PAK2Q13177 524 aa22.14■■□□□ 1.13
R3HDM1-215ENST00000483021 BTG3Q14201 252 aaPredicted RBP22.14■■□□□ 1.13
R3HDM1-215ENST00000483021 CCDC60Q8IWA6 550 aaPredicted RBP22.14■■□□□ 1.13
R3HDM1-215ENST00000483021 CCDC148Q8NFR7 591 aa22.14■■□□□ 1.13
R3HDM1-215ENST00000483021 BICD2Q8TD16 824 aa22.14■■□□□ 1.13
R3HDM1-215ENST00000483021 CLP1Q92989 425 aaKnown RBP22.14■■□□□ 1.13
R3HDM1-215ENST00000483021 ZNF689Q96CS4 500 aaPredicted RBP22.14■■□□□ 1.13
R3HDM1-215ENST00000483021 CCDC136Q96JN2 1154 aa22.14■■□□□ 1.13
R3HDM1-215ENST00000483021 AGXT2Q9BYV1 514 aa22.14■■□□□ 1.13
R3HDM1-215ENST00000483021 CELF4Q9BZC1 486 aaKnown RBP22.14■■□□□ 1.13
R3HDM1-215ENST00000483021 ZNF302Q9NR11 478 aa22.14■■□□□ 1.13
R3HDM1-215ENST00000483021 TBC1D22BQ9NU19 505 aa22.14■■□□□ 1.13
R3HDM1-215ENST00000483021 MYO7AQ13402 2215 aa22.13■■□□□ 1.13
R3HDM1-215ENST00000483021 BMPR1AP36894 532 aa22.13■■□□□ 1.13
R3HDM1-215ENST00000483021 KRT76Q01546 638 aa22.13■■□□□ 1.13
R3HDM1-215ENST00000483021 TMEM62Q0P6H9 643 aa22.13■■□□□ 1.13
R3HDM1-215ENST00000483021 PKN1Q16512 942 aa22.13■■□□□ 1.13
R3HDM1-215ENST00000483021 PDXDC2PQ6P474 469 aa22.13■■□□□ 1.13
R3HDM1-215ENST00000483021 NPAS4Q8IUM7 802 aa22.13■■□□□ 1.13
R3HDM1-215ENST00000483021 LINC01599Q8WXQ3 324 aa22.13■■□□□ 1.13
R3HDM1-215ENST00000483021 ZNF577Q9BSK1 485 aa22.13■■□□□ 1.13
R3HDM1-215ENST00000483021 RNF26Q9BY78 433 aaPredicted RBP22.13■■□□□ 1.13
R3HDM1-215ENST00000483021 PADI3Q9ULW8 664 aa22.13■■□□□ 1.13
R3HDM1-215ENST00000483021 DHX15O43143 795 aaKnown RBP22.12■■□□□ 1.13
R3HDM1-215ENST00000483021 DGKIO75912 1065 aa22.12■■□□□ 1.13
R3HDM1-215ENST00000483021 LINC00271P0C7V0 271 aa22.12■■□□□ 1.13
R3HDM1-215ENST00000483021 STAG3L1P0CL83 205 aa22.12■■□□□ 1.13
R3HDM1-215ENST00000483021 PUS10Q3MIT2 529 aaKnown RBP22.12■■□□□ 1.13
R3HDM1-215ENST00000483021 ZNF484Q5JVG2 852 aa22.12■■□□□ 1.13
R3HDM1-215ENST00000483021 ZNF746Q6NUN9 644 aaPredicted RBP22.12■■□□□ 1.13
R3HDM1-215ENST00000483021 SMAP1Q8IYB5 467 aaPredicted RBP22.12■■□□□ 1.13
R3HDM1-215ENST00000483021 PABPC5Q96DU9 382 aaKnown RBP22.12■■□□□ 1.13
R3HDM1-215ENST00000483021 PLVAPQ9BX97 442 aa22.12■■□□□ 1.13
R3HDM1-215ENST00000483021 NCK2O43639 380 aa22.11■■□□□ 1.13
R3HDM1-215ENST00000483021 KLRC1P26715 233 aa22.11■■□□□ 1.13
R3HDM1-215ENST00000483021 TCEAL5Q5H9L2 206 aa22.11■■□□□ 1.13
R3HDM1-215ENST00000483021 ODR4Q5SWX8 454 aa22.11■■□□□ 1.13
R3HDM1-215ENST00000483021 CMTR2Q8IYT2 770 aaKnown RBP22.11■■□□□ 1.13
R3HDM1-215ENST00000483021 NEK9Q8TD19 979 aa22.11■■□□□ 1.13
R3HDM1-215ENST00000483021 PHKBQ93100 1093 aa22.11■■□□□ 1.13
R3HDM1-215ENST00000483021 EPB41L2O43491 1005 aaKnown RBP22.1■■□□□ 1.13
R3HDM1-215ENST00000483021 IFNAR1P17181 557 aa22.1■■□□□ 1.13
R3HDM1-215ENST00000483021 COL19A1Q14993 1142 aa22.1■■□□□ 1.13
R3HDM1-215ENST00000483021 SWSAP1Q6NVH7 229 aa22.1■■□□□ 1.13
R3HDM1-215ENST00000483021 CKAP2LQ8IYA6 745 aa22.1■■□□□ 1.13
R3HDM1-215ENST00000483021 GADD45GIP1Q8TAE8 222 aaPredicted RBP22.1■■□□□ 1.13
R3HDM1-215ENST00000483021 BBXQ8WY36 941 aaPredicted RBP22.1■■□□□ 1.13
R3HDM1-215ENST00000483021 RNF216Q9NWF9 866 aaPredicted RBP22.1■■□□□ 1.13
R3HDM1-215ENST00000483021 PSAPP07602 524 aa22.09■■□□□ 1.13
R3HDM1-215ENST00000483021 CIITAP33076 1130 aa22.09■■□□□ 1.13
R3HDM1-215ENST00000483021 EVCP57679 992 aa22.09■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 161 ms