RNA–Protein interactions for RNA: ENST00000471445.5

SREBF1-210, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 936 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-210ENST00000471445 ATP8B4Q8TF62 1192 aa23.76■■□□□ 1.39
SREBF1-210ENST00000471445 ARNTL2Q8WYA1 636 aa23.76■■□□□ 1.39
SREBF1-210ENST00000471445 SLKQ9H2G2 1235 aaPredicted RBP23.76■■□□□ 1.39
SREBF1-210ENST00000471445 PCDHA2Q9Y5H9 948 aa23.76■■□□□ 1.39
SREBF1-210ENST00000471445 CDY2AQ9Y6F7 541 aa23.76■■□□□ 1.39
SREBF1-210ENST00000471445 RALGAPA2Q2PPJ7 1873 aa23.76■■□□□ 1.39
SREBF1-210ENST00000471445 COL1A2P08123 1366 aa23.76■■□□□ 1.39
SREBF1-210ENST00000471445 PRRC2BQ5JSZ5 2229 aaKnown RBP23.75■■□□□ 1.39
SREBF1-210ENST00000471445 UNC80Q8N2C7 3258 aa23.75■■□□□ 1.39
SREBF1-210ENST00000471445 RFXAPO00287 272 aa23.75■■□□□ 1.39
SREBF1-210ENST00000471445 HBP1O60381 514 aa23.75■■□□□ 1.39
SREBF1-210ENST00000471445 POU3F3P20264 500 aaPredicted RBP23.75■■□□□ 1.39
SREBF1-210ENST00000471445 USP11P51784 963 aa23.75■■□□□ 1.39
SREBF1-210ENST00000471445 HTRA4P83105 476 aaPredicted RBP23.75■■□□□ 1.39
SREBF1-210ENST00000471445 LPIN1Q14693 890 aa23.75■■□□□ 1.39
SREBF1-210ENST00000471445 FBXO47Q5MNV8 452 aa23.75■■□□□ 1.39
SREBF1-210ENST00000471445 GALNT17Q6IS24 598 aa23.75■■□□□ 1.39
SREBF1-210ENST00000471445 FAM117BQ6P1L5 589 aa23.75■■□□□ 1.39
SREBF1-210ENST00000471445 BLIDQ8IZY5 108 aa23.75■■□□□ 1.39
SREBF1-210ENST00000471445 TBCKQ8TEA7 893 aa23.75■■□□□ 1.39
SREBF1-210ENST00000471445 FAM49AQ9H0Q0 323 aaPredicted RBP23.75■■□□□ 1.39
SREBF1-210ENST00000471445 IGSF9BQ9UPX0 1349 aa23.75■■□□□ 1.39
SREBF1-210ENST00000471445 EIF5BO60841 1220 aaKnown RBP23.74■■□□□ 1.39
SREBF1-210ENST00000471445 AK2P54819 239 aa23.74■■□□□ 1.39
SREBF1-210ENST00000471445 ANKRD1Q15327 319 aa23.74■■□□□ 1.39
SREBF1-210ENST00000471445 PDXDC2PQ6P474 469 aa23.74■■□□□ 1.39
SREBF1-210ENST00000471445 SP7Q8TDD2 431 aaPredicted RBP23.74■■□□□ 1.39
SREBF1-210ENST00000471445 TCEAL9Q9UHQ7 104 aa23.74■■□□□ 1.39
SREBF1-210ENST00000471445 INSL6Q9Y581 213 aa23.74■■□□□ 1.39
SREBF1-210ENST00000471445 MAFBQ9Y5Q3 323 aaPredicted RBP23.74■■□□□ 1.39
SREBF1-210ENST00000471445 TTC3P53804 2025 aa23.74■■□□□ 1.39
SREBF1-210ENST00000471445 SMIM35A0A1B0GVV1 85 aa23.73■■□□□ 1.39
SREBF1-210ENST00000471445 LINC01553A4QN01 128 aa23.73■■□□□ 1.39
SREBF1-210ENST00000471445 MSH4O15457 936 aa23.73■■□□□ 1.39
SREBF1-210ENST00000471445 ATP4AP20648 1035 aa23.73■■□□□ 1.39
SREBF1-210ENST00000471445 SWSAP1Q6NVH7 229 aa23.73■■□□□ 1.39
SREBF1-210ENST00000471445 MTHFD1LQ6UB35 978 aa23.73■■□□□ 1.39
SREBF1-210ENST00000471445 TSHZ1Q6ZSZ6 1077 aa23.73■■□□□ 1.39
SREBF1-210ENST00000471445 PPM1EQ8WY54 764 aa23.73■■□□□ 1.39
SREBF1-210ENST00000471445 TOP1MTQ969P6 601 aa23.73■■□□□ 1.39
SREBF1-210ENST00000471445 PRDM6Q9NQX0 595 aa23.73■■□□□ 1.39
SREBF1-210ENST00000471445 TRPV2Q9Y5S1 764 aa23.73■■□□□ 1.39
SREBF1-210ENST00000471445 MTCH2Q9Y6C9 303 aa23.73■■□□□ 1.39
SREBF1-210ENST00000471445 ERVK-21P61565 698 aa23.72■■□□□ 1.39
SREBF1-210ENST00000471445 TGS1Q96RS0 853 aaKnown RBP23.72■■□□□ 1.39
SREBF1-210ENST00000471445 COL25A1Q9BXS0 654 aaPredicted RBP23.72■■□□□ 1.39
SREBF1-210ENST00000471445 PCDHA10Q9Y5I2 948 aa23.72■■□□□ 1.39
SREBF1-210ENST00000471445 SQORQ9Y6N5 450 aa23.72■■□□□ 1.39
SREBF1-210ENST00000471445 KDM3AQ9Y4C1 1321 aa23.72■■□□□ 1.39
SREBF1-210ENST00000471445 PRUNE2Q8WUY3 3088 aa23.71■■□□□ 1.39
SREBF1-210ENST00000471445 WDR64B1ANS9 1081 aa23.71■■□□□ 1.39
SREBF1-210ENST00000471445 ZBTB42B2RXF5 422 aa23.71■■□□□ 1.39
SREBF1-210ENST00000471445 GTPBP6O43824 516 aaPredicted RBP23.71■■□□□ 1.39
SREBF1-210ENST00000471445 LPXNO60711 386 aa23.71■■□□□ 1.39
SREBF1-210ENST00000471445 CTDNEP1O95476 244 aa23.71■■□□□ 1.39
SREBF1-210ENST00000471445 TDP2O95551 362 aa23.71■■□□□ 1.39
SREBF1-210ENST00000471445 PSAPP07602 524 aa23.71■■□□□ 1.39
SREBF1-210ENST00000471445 GRB10Q13322 594 aa23.71■■□□□ 1.39
SREBF1-210ENST00000471445 Q4G0T1 1027 aa23.71■■□□□ 1.39
SREBF1-210ENST00000471445 ZNF484Q5JVG2 852 aa23.71■■□□□ 1.39
SREBF1-210ENST00000471445 IER5Q5VY09 327 aa23.71■■□□□ 1.39
SREBF1-210ENST00000471445 MOXD1Q6UVY6 613 aa23.71■■□□□ 1.39
SREBF1-210ENST00000471445 BBXQ8WY36 941 aaPredicted RBP23.71■■□□□ 1.39
SREBF1-210ENST00000471445 SLC5A5Q92911 643 aa23.71■■□□□ 1.39
SREBF1-210ENST00000471445 MBOAT7Q96N66 472 aa23.71■■□□□ 1.39
SREBF1-210ENST00000471445 RIT2Q99578 217 aa23.71■■□□□ 1.39
SREBF1-210ENST00000471445 PHF20Q9BVI0 1012 aa23.71■■□□□ 1.39
SREBF1-210ENST00000471445 CYP3A7-CYP3A51PA0A087WV96 503 aa23.7■■□□□ 1.38
SREBF1-210ENST00000471445 M0QZ92 97 aa23.7■■□□□ 1.38
SREBF1-210ENST00000471445 CYP3A7P24462 503 aa23.7■■□□□ 1.38
SREBF1-210ENST00000471445 KLRC1P26715 233 aa23.7■■□□□ 1.38
SREBF1-210ENST00000471445 NONOQ15233 471 aaKnown RBP eCLIP23.7■■□□□ 1.38
SREBF1-210ENST00000471445 CCDC85BQ15834 202 aaPredicted RBP23.7■■□□□ 1.38
SREBF1-210ENST00000471445 AGO3Q9H9G7 860 aaKnown RBP23.7■■□□□ 1.38
SREBF1-210ENST00000471445 THEGQ9P2T0 379 aa23.7■■□□□ 1.38
SREBF1-210ENST00000471445 GABBR1Q9UBS5 961 aa23.7■■□□□ 1.38
SREBF1-210ENST00000471445 KCNJ14Q9UNX9 436 aa23.7■■□□□ 1.38
SREBF1-210ENST00000471445 GAS7O60861 476 aa23.69■■□□□ 1.38
SREBF1-210ENST00000471445 LARGE1O95461 756 aa23.69■■□□□ 1.38
SREBF1-210ENST00000471445 TMEM62Q0P6H9 643 aa23.69■■□□□ 1.38
SREBF1-210ENST00000471445 KRT25Q7Z3Z0 450 aa23.69■■□□□ 1.38
SREBF1-210ENST00000471445 CKAP2LQ8IYA6 745 aa23.69■■□□□ 1.38
SREBF1-210ENST00000471445 MICALL1Q8N3F8 863 aa23.69■■□□□ 1.38
SREBF1-210ENST00000471445 NME8Q8N427 588 aa23.69■■□□□ 1.38
SREBF1-210ENST00000471445 GDPD5Q8WTR4 605 aa23.69■■□□□ 1.38
SREBF1-210ENST00000471445 TEKT3Q9BXF9 490 aa23.69■■□□□ 1.38
SREBF1-210ENST00000471445 CELF4Q9BZC1 486 aaKnown RBP23.69■■□□□ 1.38
SREBF1-210ENST00000471445 PSMD10O75832 226 aa23.68■■□□□ 1.38
SREBF1-210ENST00000471445 SEC24BO95487 1268 aa23.68■■□□□ 1.38
SREBF1-210ENST00000471445 C22orf31O95567 290 aa23.68■■□□□ 1.38
SREBF1-210ENST00000471445 CD52P31358 61 aa23.68■■□□□ 1.38
SREBF1-210ENST00000471445 ME3Q16798 604 aa23.68■■□□□ 1.38
SREBF1-210ENST00000471445 LRCH2Q5VUJ6 765 aa23.68■■□□□ 1.38
SREBF1-210ENST00000471445 KRT40Q6A162 431 aa23.68■■□□□ 1.38
SREBF1-210ENST00000471445 LINC01599Q8WXQ3 324 aa23.68■■□□□ 1.38
SREBF1-210ENST00000471445 GTF3C6Q969F1 213 aa23.68■■□□□ 1.38
SREBF1-210ENST00000471445 FAM167AQ96KS9 214 aa23.68■■□□□ 1.38
SREBF1-210ENST00000471445 YME1L1Q96TA2 773 aa23.68■■□□□ 1.38
SREBF1-210ENST00000471445 UNC45AQ9H3U1 944 aa23.68■■□□□ 1.38
SREBF1-210ENST00000471445 SUGCTQ9HAC7 445 aa23.68■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms