RNA–Protein interactions for RNA: ENST00000443528.5

ACTB-206, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 569 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-206ENST00000443528 RNPC3Q96LT9 517 aaKnown RBP17.72■□□□□ 0.43
ACTB-206ENST00000443528 LAMA2P24043 3122 aaKnown RBP17.72■□□□□ 0.43
ACTB-206ENST00000443528 ZBTB42B2RXF5 422 aa17.71■□□□□ 0.43
ACTB-206ENST00000443528 NEMFO60524 1076 aa17.71■□□□□ 0.43
ACTB-206ENST00000443528 NBNO60934 754 aa17.71■□□□□ 0.43
ACTB-206ENST00000443528 PFKMP08237 780 aa17.71■□□□□ 0.43
ACTB-206ENST00000443528 SPIRE1Q08AE8 756 aa17.71■□□□□ 0.43
ACTB-206ENST00000443528 GNL2Q13823 731 aaKnown RBP17.71■□□□□ 0.43
ACTB-206ENST00000443528 TAF2Q6P1X5 1199 aa17.71■□□□□ 0.43
ACTB-206ENST00000443528 TRMT1LQ7Z2T5 733 aaKnown RBP17.71■□□□□ 0.43
ACTB-206ENST00000443528 RPAINQ86UA6 219 aa17.71■□□□□ 0.43
ACTB-206ENST00000443528 CKAP2LQ8IYA6 745 aa17.71■□□□□ 0.43
ACTB-206ENST00000443528 SLFN12Q8IYM2 578 aa17.71■□□□□ 0.43
ACTB-206ENST00000443528 BBXQ8WY36 941 aaPredicted RBP17.71■□□□□ 0.43
ACTB-206ENST00000443528 HERVK_113Q902F9 699 aa17.71■□□□□ 0.43
ACTB-206ENST00000443528 LRCH3Q96II8 777 aa17.71■□□□□ 0.43
ACTB-206ENST00000443528 MTMR9Q96QG7 549 aa17.71■□□□□ 0.43
ACTB-206ENST00000443528 TMEM60Q9H2L4 133 aa17.71■□□□□ 0.43
ACTB-206ENST00000443528 SCN5AQ14524 2016 aa17.71■□□□□ 0.42
ACTB-206ENST00000443528 RSPH10B2B2RC85 870 aa17.7■□□□□ 0.42
ACTB-206ENST00000443528 K7ELQ4 463 aaPredicted RBP17.7■□□□□ 0.42
ACTB-206ENST00000443528 MARCH6O60337 910 aa17.7■□□□□ 0.42
ACTB-206ENST00000443528 CAND2O75155 1236 aa17.7■□□□□ 0.42
ACTB-206ENST00000443528 BAG4O95429 457 aaKnown RBP17.7■□□□□ 0.42
ACTB-206ENST00000443528 PARNO95453 639 aaKnown RBP17.7■□□□□ 0.42
ACTB-206ENST00000443528 CXCL10P02778 98 aa17.7■□□□□ 0.42
ACTB-206ENST00000443528 RSPH10BP0C881 870 aa17.7■□□□□ 0.42
ACTB-206ENST00000443528 MCM7P33993 719 aa17.7■□□□□ 0.42
ACTB-206ENST00000443528 PRKCEQ02156 737 aa17.7■□□□□ 0.42
ACTB-206ENST00000443528 CALCRLQ16602 461 aa17.7■□□□□ 0.42
ACTB-206ENST00000443528 ZNF484Q5JVG2 852 aa17.7■□□□□ 0.42
ACTB-206ENST00000443528 MTHFD1LQ6UB35 978 aa17.7■□□□□ 0.42
ACTB-206ENST00000443528 OTOP2Q7RTS6 562 aa17.7■□□□□ 0.42
ACTB-206ENST00000443528 DNAJB3Q8WWF6 145 aa17.7■□□□□ 0.42
ACTB-206ENST00000443528 SNX21Q969T3 373 aa17.7■□□□□ 0.42
ACTB-206ENST00000443528 OSBPL7Q9BZF2 842 aa17.7■□□□□ 0.42
ACTB-206ENST00000443528 CXXC1Q9P0U4 656 aaPredicted RBP17.7■□□□□ 0.42
ACTB-206ENST00000443528 COL1A2P08123 1366 aa17.69■□□□□ 0.42
ACTB-206ENST00000443528 STBD1O95210 358 aa17.69■□□□□ 0.42
ACTB-206ENST00000443528 OATP04181 439 aa17.69■□□□□ 0.42
ACTB-206ENST00000443528 CTSHP09668 335 aa17.69■□□□□ 0.42
ACTB-206ENST00000443528 KLRC1P26715 233 aa17.69■□□□□ 0.42
ACTB-206ENST00000443528 TOB1P50616 345 aaPredicted RBP17.69■□□□□ 0.42
ACTB-206ENST00000443528 NBR1Q14596 966 aa17.69■□□□□ 0.42
ACTB-206ENST00000443528 ZNF174Q15697 407 aa17.69■□□□□ 0.42
ACTB-206ENST00000443528 TCTN1Q2MV58 587 aa17.69■□□□□ 0.42
ACTB-206ENST00000443528 FAM26DQ5JW98 314 aa17.69■□□□□ 0.42
ACTB-206ENST00000443528 TTC38Q5R3I4 469 aa17.69■□□□□ 0.42
ACTB-206ENST00000443528 LARP1BQ659C4 914 aaKnown RBP17.69■□□□□ 0.42
ACTB-206ENST00000443528 FTOQ9C0B1 505 aaKnown RBP eCLIP17.69■□□□□ 0.421e-22■■□□□ 11.6
ACTB-206ENST00000443528 PCDHA2Q9Y5H9 948 aa17.69■□□□□ 0.42
ACTB-206ENST00000443528 H3BQV1 296 aa17.68■□□□□ 0.42
ACTB-206ENST00000443528 CHRNA1P02708 482 aa17.68■□□□□ 0.42
ACTB-206ENST00000443528 TXKP42681 527 aa17.68■□□□□ 0.42
ACTB-206ENST00000443528 TRAPPC10P48553 1259 aa17.68■□□□□ 0.42
ACTB-206ENST00000443528 MGAT3Q09327 533 aa17.68■□□□□ 0.42
ACTB-206ENST00000443528 EPHA7Q15375 998 aa17.68■□□□□ 0.42
ACTB-206ENST00000443528 MCTP1Q6DN14 999 aa17.68■□□□□ 0.42
ACTB-206ENST00000443528 NCAPH2Q6IBW4 605 aa17.68■□□□□ 0.42
ACTB-206ENST00000443528 BANK1Q8NDB2 785 aa17.68■□□□□ 0.42
ACTB-206ENST00000443528 FAM167AQ96KS9 214 aa17.68■□□□□ 0.42
ACTB-206ENST00000443528 TTC12Q9H892 705 aaPredicted RBP17.68■□□□□ 0.42
ACTB-206ENST00000443528 NRBP2Q9NSY0 501 aa17.68■□□□□ 0.42
ACTB-206ENST00000443528 PCDHA12Q9UN75 941 aa17.68■□□□□ 0.42
ACTB-206ENST00000443528 SMIM35A0A1B0GVV1 85 aa17.67■□□□□ 0.42
ACTB-206ENST00000443528 C22orf31O95567 290 aa17.67■□□□□ 0.42
ACTB-206ENST00000443528 PSMC5P62195 406 aa17.67■□□□□ 0.42
ACTB-206ENST00000443528 ORC2Q13416 577 aaPredicted RBP17.67■□□□□ 0.42
ACTB-206ENST00000443528 FAM109BQ6ICB4 259 aaPredicted RBP17.67■□□□□ 0.42
ACTB-206ENST00000443528 C4orf32Q8N8J7 132 aa17.67■□□□□ 0.42
ACTB-206ENST00000443528 INTS4Q96HW7 963 aaKnown RBP17.67■□□□□ 0.42
ACTB-206ENST00000443528 FAM49AQ9H0Q0 323 aaPredicted RBP17.67■□□□□ 0.42
ACTB-206ENST00000443528 WRAP73Q9P2S5 460 aaPredicted RBP17.67■□□□□ 0.42
ACTB-206ENST00000443528 NOL7Q9UMY1 257 aaKnown RBP17.67■□□□□ 0.42
ACTB-206ENST00000443528 KAT6AQ92794 2004 aa17.66■□□□□ 0.42
ACTB-206ENST00000443528 TMEM150BA6NC51 233 aa17.66■□□□□ 0.42
ACTB-206ENST00000443528 P4HBP07237 508 aaKnown RBP17.66■□□□□ 0.42
ACTB-206ENST00000443528 QARSP47897 775 aaKnown RBP17.66■□□□□ 0.42
ACTB-206ENST00000443528 TARBP2Q15633 366 aaKnown RBP17.66■□□□□ 0.42
ACTB-206ENST00000443528 XKR3Q5GH77 459 aa17.66■□□□□ 0.42
ACTB-206ENST00000443528 CNKSR3Q6P9H4 555 aa17.66■□□□□ 0.42
ACTB-206ENST00000443528 RSPH3Q86UC2 560 aa17.66■□□□□ 0.42
ACTB-206ENST00000443528 KIAA0319LQ8IZA0 1049 aa17.66■□□□□ 0.42
ACTB-206ENST00000443528 DYDC2Q96IM9 177 aa17.66■□□□□ 0.42
ACTB-206ENST00000443528 CEP89Q96ST8 783 aa17.66■□□□□ 0.42
ACTB-206ENST00000443528 NIFKQ9BYG3 293 aaKnown RBP17.66■□□□□ 0.42
ACTB-206ENST00000443528 RGL1Q9NZL6 768 aa17.66■□□□□ 0.42
ACTB-206ENST00000443528 PCDHB6Q9Y5E3 794 aa17.66■□□□□ 0.42
ACTB-206ENST00000443528 TET1Q8NFU7 2136 aa17.65■□□□□ 0.42
ACTB-206ENST00000443528 WDR81Q562E7 1941 aa17.65■□□□□ 0.42
ACTB-206ENST00000443528 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.65■□□□□ 0.42
ACTB-206ENST00000443528 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.65■□□□□ 0.42
ACTB-206ENST00000443528 OR52Z1P0C646 297 aa17.65■□□□□ 0.42
ACTB-206ENST00000443528 ACTN1P12814 892 aa17.65■□□□□ 0.42
ACTB-206ENST00000443528 SMAD3P84022 425 aaKnown RBP17.65■□□□□ 0.42
ACTB-206ENST00000443528 PLEKHG4Q58EX7 1191 aa17.65■□□□□ 0.42
ACTB-206ENST00000443528 DBF4BQ8NFT6 615 aa17.65■□□□□ 0.42
ACTB-206ENST00000443528 MTIF3Q9H2K0 278 aaKnown RBP17.65■□□□□ 0.42
ACTB-206ENST00000443528 FOXD4L1Q9NU39 408 aa17.65■□□□□ 0.42
ACTB-206ENST00000443528 CEP131Q9UPN4 1083 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms