RNA–Protein interactions for RNA: ENST00000427660.6

NUDCD1-202, Transcript of NudC domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene NUDCD1, Length 2,098 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD1-202ENST00000427660 TMEM60Q9H2L4 133 aa5.71□□□□□ -1.49
NUDCD1-202ENST00000427660 RC3H2Q9HBD1 1191 aaKnown RBP5.71□□□□□ -1.49
NUDCD1-202ENST00000427660 SEMA3GQ9NS98 782 aa5.71□□□□□ -1.49
NUDCD1-202ENST00000427660 TNFRSF10DQ9UBN6 386 aa5.71□□□□□ -1.49
NUDCD1-202ENST00000427660 GULP1Q9UBP9 304 aa5.71□□□□□ -1.49
NUDCD1-202ENST00000427660 LCHNA4D1U4 455 aa5.71□□□□□ -1.5
NUDCD1-202ENST00000427660 FAM170BA6NMN3 283 aa5.71□□□□□ -1.5
NUDCD1-202ENST00000427660 A6NNZ2 444 aa5.71□□□□□ -1.5
NUDCD1-202ENST00000427660 TBX3O15119 743 aa5.71□□□□□ -1.5
NUDCD1-202ENST00000427660 RPL10P27635 214 aaKnown RBP5.71□□□□□ -1.5
NUDCD1-202ENST00000427660 EPHA5P54756 1037 aa5.71□□□□□ -1.5
NUDCD1-202ENST00000427660 FAM193AP78312 1265 aa5.71□□□□□ -1.5
NUDCD1-202ENST00000427660 UGT8Q16880 541 aa5.71□□□□□ -1.5
NUDCD1-202ENST00000427660 TOR2AQ5JU69 321 aa5.71□□□□□ -1.5
NUDCD1-202ENST00000427660 TICAM2Q86XR7 235 aa5.71□□□□□ -1.5
NUDCD1-202ENST00000427660 MYRIPQ8NFW9 859 aa5.71□□□□□ -1.5
NUDCD1-202ENST00000427660 RTF1Q92541 710 aaKnown RBP5.71□□□□□ -1.5
NUDCD1-202ENST00000427660 HERPUD2Q9BSE4 406 aa5.71□□□□□ -1.5
NUDCD1-202ENST00000427660 METTL22Q9BUU2 404 aaPredicted RBP5.71□□□□□ -1.5
NUDCD1-202ENST00000427660 PDGFDQ9GZP0 370 aaPredicted RBP5.71□□□□□ -1.5
NUDCD1-202ENST00000427660 C7orf69Q9H7B7 122 aa5.71□□□□□ -1.5
NUDCD1-202ENST00000427660 CASS4Q9NQ75 786 aa5.71□□□□□ -1.5
NUDCD1-202ENST00000427660 SNX11Q9Y5W9 270 aa5.71□□□□□ -1.5
NUDCD1-202ENST00000427660 NPHP1O15259 732 aa5.7□□□□□ -1.5
NUDCD1-202ENST00000427660 DTNBO60941 627 aa5.7□□□□□ -1.5
NUDCD1-202ENST00000427660 TUSC2O75896 110 aa5.7□□□□□ -1.5
NUDCD1-202ENST00000427660 SETSIPP0DME0 302 aa5.7□□□□□ -1.5
NUDCD1-202ENST00000427660 SLC5A1P13866 664 aa5.7□□□□□ -1.5
NUDCD1-202ENST00000427660 TM4SF4P48230 202 aa5.7□□□□□ -1.5
NUDCD1-202ENST00000427660 CEBPAP49715 358 aaPredicted RBP5.7□□□□□ -1.5
NUDCD1-202ENST00000427660 ALDH5A1P51649 535 aaPredicted RBP5.7□□□□□ -1.5
NUDCD1-202ENST00000427660 EGR3Q06889 387 aa5.7□□□□□ -1.5
NUDCD1-202ENST00000427660 TMEM132BQ14DG7 1078 aa5.7□□□□□ -1.5
NUDCD1-202ENST00000427660 SEC23AQ15436 765 aa5.7□□□□□ -1.5
NUDCD1-202ENST00000427660 CHRNA2Q15822 529 aa5.7□□□□□ -1.5
NUDCD1-202ENST00000427660 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.7□□□□□ -1.5
NUDCD1-202ENST00000427660 EMC4Q5J8M3 183 aa5.7□□□□□ -1.5
NUDCD1-202ENST00000427660 ZPBP2Q6X784 338 aa5.7□□□□□ -1.5
NUDCD1-202ENST00000427660 ESPNLQ6ZVH7 1005 aa5.7□□□□□ -1.5
NUDCD1-202ENST00000427660 USP45Q70EL2 814 aa5.7□□□□□ -1.5
NUDCD1-202ENST00000427660 KCTD1Q719H9 257 aa5.7□□□□□ -1.5
NUDCD1-202ENST00000427660 SRLQ86TD4 932 aa5.7□□□□□ -1.5
NUDCD1-202ENST00000427660 CREG2Q8IUH2 290 aa5.7□□□□□ -1.5
NUDCD1-202ENST00000427660 PRR18Q8N4B5 295 aa5.7□□□□□ -1.5
NUDCD1-202ENST00000427660 MVB12AQ96EY5 273 aa5.7□□□□□ -1.5
NUDCD1-202ENST00000427660 MTA3Q9BTC8 594 aa5.7□□□□□ -1.5
NUDCD1-202ENST00000427660 SELENOOQ9BVL4 669 aa5.7□□□□□ -1.5
NUDCD1-202ENST00000427660 LDHAL6BQ9BYZ2 381 aaPredicted RBP5.7□□□□□ -1.5
NUDCD1-202ENST00000427660 DMTF1Q9Y222 760 aa5.7□□□□□ -1.5
NUDCD1-202ENST00000427660 ABHD14A-ACY1A0A1B0GW23 586 aa5.7□□□□□ -1.5
NUDCD1-202ENST00000427660 A0A1W2PQ45 241 aaPredicted RBP5.7□□□□□ -1.5
NUDCD1-202ENST00000427660 A0A1W2PQY0 241 aa5.7□□□□□ -1.5
NUDCD1-202ENST00000427660 RNF225M0QZC1 329 aaPredicted RBP5.7□□□□□ -1.5
NUDCD1-202ENST00000427660 CPSF6Q16630 551 aaKnown RBP eCLIP5.7□□□□□ -1.5
NUDCD1-202ENST00000427660 CATSPEREQ5SY80 951 aa5.7□□□□□ -1.5
NUDCD1-202ENST00000427660 LCE2CQ5TA81 110 aa5.7□□□□□ -1.5
NUDCD1-202ENST00000427660 OVCH2Q7RTZ1 564 aa5.7□□□□□ -1.5
NUDCD1-202ENST00000427660 PHYKPLQ8IUZ5 450 aa5.7□□□□□ -1.5
NUDCD1-202ENST00000427660 GRAMD1CQ8IYS0 662 aa5.7□□□□□ -1.5
NUDCD1-202ENST00000427660 SSBP4Q9BWG4 385 aaPredicted RBP5.7□□□□□ -1.5
NUDCD1-202ENST00000427660 ANAPC4Q9UJX5 808 aa5.7□□□□□ -1.5
NUDCD1-202ENST00000427660 RAXQ9Y2V3 346 aa5.7□□□□□ -1.5
NUDCD1-202ENST00000427660 HMX2A2RU54 273 aa5.69□□□□□ -1.5
NUDCD1-202ENST00000427660 PPP1R11O60927 126 aaPredicted RBP5.69□□□□□ -1.5
NUDCD1-202ENST00000427660 FUCA1P04066 466 aa5.69□□□□□ -1.5
NUDCD1-202ENST00000427660 OSMP13725 252 aa5.69□□□□□ -1.5
NUDCD1-202ENST00000427660 PDCP20941 246 aa5.69□□□□□ -1.5
NUDCD1-202ENST00000427660 TRAPPC10P48553 1259 aa5.69□□□□□ -1.5
NUDCD1-202ENST00000427660 CHAF1AQ13111 956 aaPredicted RBP5.69□□□□□ -1.5
NUDCD1-202ENST00000427660 ANO4Q32M45 955 aa5.69□□□□□ -1.5
NUDCD1-202ENST00000427660 MBNL2Q5VZF2 373 aaKnown RBP5.69□□□□□ -1.5
NUDCD1-202ENST00000427660 ANO1Q5XXA6 986 aa5.69□□□□□ -1.5
NUDCD1-202ENST00000427660 C1orf228Q6PIY5 440 aa5.69□□□□□ -1.5
NUDCD1-202ENST00000427660 DENND1CQ8IV53 801 aa5.69□□□□□ -1.5
NUDCD1-202ENST00000427660 THEMISQ8N1K5 641 aaPredicted RBP5.69□□□□□ -1.5
NUDCD1-202ENST00000427660 C7orf31Q8N865 590 aa5.69□□□□□ -1.5
NUDCD1-202ENST00000427660 FAM156AQ8NDB6 213 aa5.69□□□□□ -1.5
NUDCD1-202ENST00000427660 ACRBPQ8NEB7 543 aa5.69□□□□□ -1.5
NUDCD1-202ENST00000427660 PHOSPHO1Q8TCT1 267 aa5.69□□□□□ -1.5
NUDCD1-202ENST00000427660 PARD3BQ8TEW8 1205 aa5.69□□□□□ -1.5
NUDCD1-202ENST00000427660 CD244Q9BZW8 370 aa5.69□□□□□ -1.5
NUDCD1-202ENST00000427660 QRSL1Q9H0R6 528 aaKnown RBP5.69□□□□□ -1.5
NUDCD1-202ENST00000427660 SMOC1Q9H4F8 434 aa5.69□□□□□ -1.5
NUDCD1-202ENST00000427660 STOML1Q9UBI4 398 aa5.69□□□□□ -1.5
NUDCD1-202ENST00000427660 TUBD1Q9UJT1 453 aa5.69□□□□□ -1.5
NUDCD1-202ENST00000427660 U3KQE9 123 aa5.69□□□□□ -1.5
NUDCD1-202ENST00000427660 PITPNM2Q9BZ72 1349 aa5.69□□□□□ -1.5
NUDCD1-202ENST00000427660 FADS2P1A8MWK0 482 aa5.68□□□□□ -1.5
NUDCD1-202ENST00000427660 BUB1BO60566 1050 aaPredicted RBP5.68□□□□□ -1.5
NUDCD1-202ENST00000427660 ESR1P03372 595 aa5.68□□□□□ -1.5
NUDCD1-202ENST00000427660 ZKSCAN1P17029 563 aaPredicted RBP5.68□□□□□ -1.5
NUDCD1-202ENST00000427660 TYRP1P17643 537 aa5.68□□□□□ -1.5
NUDCD1-202ENST00000427660 SLC16A1P53985 500 aa5.68□□□□□ -1.5
NUDCD1-202ENST00000427660 KIF23Q02241 960 aaPredicted RBP5.68□□□□□ -1.5
NUDCD1-202ENST00000427660 STK3Q13188 491 aa5.68□□□□□ -1.5
NUDCD1-202ENST00000427660 SEMA5AQ13591 1074 aa5.68□□□□□ -1.5
NUDCD1-202ENST00000427660 HSF5Q4G112 596 aaPredicted RBP5.68□□□□□ -1.5
NUDCD1-202ENST00000427660 CT83Q5H943 113 aa5.68□□□□□ -1.5
NUDCD1-202ENST00000427660 CCDC149Q6ZUS6 474 aa5.68□□□□□ -1.5
NUDCD1-202ENST00000427660 SLCO6A1Q86UG4 719 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms