RNA–Protein interactions for RNA: YPL104W

MSD1, Transcript of Mitochondrial aspartyl-tRNA synthetase, yeastyeast

Gene MSD1, Length 1,977 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSD1YPL104W GGC1P38988 300 aa3.45□□□□□ -1.86
MSD1YPL104W THO1P40040 218 aaKnown RBP3.45□□□□□ -1.86
MSD1YPL104W SMK1P41808 388 aa3.45□□□□□ -1.86
MSD1YPL104W LSB3P43603 459 aaKnown RBP3.45□□□□□ -1.86
MSD1YPL104W DCP2P53550 970 aaKnown RBP3.45□□□□□ -1.86
MSD1YPL104W TY2A-DR2Q03483 438 aa3.45□□□□□ -1.86
MSD1YPL104W YKU80Q04437 629 aa3.45□□□□□ -1.86
MSD1YPL104W VPS74Q06385 345 aa3.45□□□□□ -1.86
MSD1YPL104W COS7Q07788 383 aa3.45□□□□□ -1.86
MSD1YPL104W LOT6Q07923 191 aa3.45□□□□□ -1.86
MSD1YPL104W PLB3Q08108 686 aa3.45□□□□□ -1.86
MSD1YPL104W GET4Q12125 312 aa3.45□□□□□ -1.86
MSD1YPL104W TY2A-BQ12260 438 aa3.45□□□□□ -1.86
MSD1YPL104W TY2A-OR2Q12293 438 aa3.45□□□□□ -1.86
MSD1YPL104W NTO1Q12311 748 aa3.45□□□□□ -1.86
MSD1YPL104W SUL2Q12325 893 aa3.45□□□□□ -1.86
MSD1YPL104W TY2A-DR1Q12392 438 aa3.45□□□□□ -1.86
MSD1YPL104W TY2A-OR1Q12439 438 aa3.45□□□□□ -1.86
MSD1YPL104W TY2A-DR3Q99303 438 aa3.45□□□□□ -1.86
MSD1YPL104W Q0010Q9ZZX9 128 aa3.45□□□□□ -1.86
MSD1YPL104W SPT15P13393 240 aaKnown RBP3.44□□□□□ -1.86
MSD1YPL104W CDC26P14724 124 aa3.44□□□□□ -1.86
MSD1YPL104W VPH2P32341 215 aa3.44□□□□□ -1.86
MSD1YPL104W RPC82P32349 654 aa3.44□□□□□ -1.86
MSD1YPL104W ARP2P32381 391 aaKnown RBP3.44□□□□□ -1.86
MSD1YPL104W APE2P32454 952 aaKnown RBP3.44□□□□□ -1.86
MSD1YPL104W TFB1P32776 642 aa3.44□□□□□ -1.86
MSD1YPL104W SLC1P33333 303 aa3.44□□□□□ -1.86
MSD1YPL104W SDS22P36047 338 aa3.44□□□□□ -1.86
MSD1YPL104W RIB1P38066 345 aa3.44□□□□□ -1.86
MSD1YPL104W SSZ1P38788 538 aaKnown RBP3.44□□□□□ -1.86
MSD1YPL104W MNN9P39107 395 aaKnown RBP3.44□□□□□ -1.86
MSD1YPL104W ERV46P39727 415 aa3.44□□□□□ -1.86
MSD1YPL104W RBG1P39729 369 aa3.44□□□□□ -1.86
MSD1YPL104W YJL070CP40361 888 aa3.44□□□□□ -1.86
MSD1YPL104W YIL108WP40483 696 aaKnown RBP3.44□□□□□ -1.86
MSD1YPL104W ELP2P42935 788 aa3.44□□□□□ -1.86
MSD1YPL104W YFR020WP43600 232 aa3.44□□□□□ -1.86
MSD1YPL104W BNA3P47039 444 aaKnown RBP3.44□□□□□ -1.86
MSD1YPL104W MUP1P50276 574 aa3.44□□□□□ -1.86
MSD1YPL104W RAI1P53063 387 aaKnown RBP3.44□□□□□ -1.86
MSD1YPL104W SNO2P53823 222 aa3.44□□□□□ -1.86
MSD1YPL104W GOR1P53839 350 aa3.44□□□□□ -1.86
MSD1YPL104W YPL113CQ02961 396 aa3.44□□□□□ -1.86
MSD1YPL104W ROT1Q03691 256 aa3.44□□□□□ -1.86
MSD1YPL104W MUS81Q04149 632 aaPredicted RBP3.44□□□□□ -1.86
MSD1YPL104W MFG1Q07684 458 aa3.44□□□□□ -1.86
MSD1YPL104W YLL032CQ07834 825 aaKnown RBP RIP-Chip data3.44□□□□□ -1.86not detected
MSD1YPL104W VIK1Q12045 647 aa3.44□□□□□ -1.86
MSD1YPL104W TY1A-NL1Q12391 440 aaKnown RBP3.44□□□□□ -1.86
MSD1YPL104W YOL159C-AQ3E769 90 aa3.44□□□□□ -1.86
MSD1YPL104W MHF2Q3E829 80 aa3.44□□□□□ -1.86
MSD1YPL104W NAG1Q8TGN9 163 aa3.44□□□□□ -1.86
MSD1YPL104W MDM35O60200 86 aa3.43□□□□□ -1.86
MSD1YPL104W LEU4P06208 619 aaKnown RBP3.43□□□□□ -1.86
MSD1YPL104W TAL1P15019 335 aaKnown RBP3.43□□□□□ -1.86
MSD1YPL104W FAR1P21268 830 aa3.43□□□□□ -1.86
MSD1YPL104W SLM5P25345 492 aaKnown RBP3.43□□□□□ -1.86
MSD1YPL104W TRX3P25372 127 aa3.43□□□□□ -1.86
MSD1YPL104W PET127P32606 800 aa3.43□□□□□ -1.86
MSD1YPL104W CBP4P37267 147 aa3.43□□□□□ -1.86
MSD1YPL104W RCK1P38622 512 aa3.43□□□□□ -1.86
MSD1YPL104W DED81P38707 554 aaKnown RBP3.43□□□□□ -1.86
MSD1YPL104W RIX1P38883 763 aaPredicted RBP3.43□□□□□ -1.86
MSD1YPL104W EMC2P47133 292 aaKnown RBP3.43□□□□□ -1.86
MSD1YPL104W SPR6Q01684 191 aa3.43□□□□□ -1.86
MSD1YPL104W YDR239CQ03780 787 aa3.43□□□□□ -1.86
MSD1YPL104W SPC19Q03954 165 aa3.43□□□□□ -1.86
MSD1YPL104W HPF1Q05164 967 aa3.43□□□□□ -1.86
MSD1YPL104W ATG17Q06410 417 aa3.43□□□□□ -1.86
MSD1YPL104W NDL1Q06568 189 aa3.43□□□□□ -1.86
MSD1YPL104W YOL131WQ08270 108 aa3.43□□□□□ -1.86
MSD1YPL104W SAM4Q08985 325 aaKnown RBP3.43□□□□□ -1.86
MSD1YPL104W WTM1Q12363 437 aaKnown RBP3.43□□□□□ -1.86
MSD1YPL104W SLH1P53327 1967 aaKnown RBP3.43□□□□□ -1.86
MSD1YPL104W YPR117WQ06116 2489 aa3.43□□□□□ -1.86
MSD1YPL104W MSB2P32334 1306 aa3.43□□□□□ -1.86
MSD1YPL104W YPR096CO13587 100 aa3.43□□□□□ -1.86
MSD1YPL104W GAL3P13045 520 aa3.43□□□□□ -1.86
MSD1YPL104W SAM35P14693 329 aa3.43□□□□□ -1.86
MSD1YPL104W POL4P25615 582 aa3.43□□□□□ -1.86
MSD1YPL104W NTG1P31378 399 aa3.43□□□□□ -1.86
MSD1YPL104W SSE2P32590 693 aaKnown RBP3.43□□□□□ -1.86
MSD1YPL104W CAT2P32796 670 aaKnown RBP3.43□□□□□ -1.86
MSD1YPL104W TIF3P34167 436 aaKnown RBP3.43□□□□□ -1.86
MSD1YPL104W MRPL37P36532 105 aa3.43□□□□□ -1.86
MSD1YPL104W RRN10P38204 145 aa3.43□□□□□ -1.86
MSD1YPL104W TRM7P38238 310 aaKnown RBP3.43□□□□□ -1.86
MSD1YPL104W RRP3P38712 501 aaKnown RBP3.43□□□□□ -1.86
MSD1YPL104W SWD1P39706 426 aa3.43□□□□□ -1.86
MSD1YPL104W IRC5P43610 853 aa3.43□□□□□ -1.86
MSD1YPL104W PMT4P46971 762 aa3.43□□□□□ -1.86
MSD1YPL104W YJL043WP47053 257 aa3.43□□□□□ -1.86
MSD1YPL104W SDT1P53078 280 aa3.43□□□□□ -1.86
MSD1YPL104W SGF73P53165 657 aa3.43□□□□□ -1.86
MSD1YPL104W TMA20P89886 181 aaPredicted RBP3.43□□□□□ -1.86
MSD1YPL104W MRPL13Q02204 264 aa3.43□□□□□ -1.86
MSD1YPL104W YVH1Q02256 364 aaKnown RBP3.43□□□□□ -1.86
MSD1YPL104W SMA1Q02651 245 aa3.43□□□□□ -1.86
MSD1YPL104W CTK1Q03957 528 aaKnown RBP3.43□□□□□ -1.86
Retrieved 100 of 5,963 RNA–protein pairs in 23.6 ms