RNA–Protein interactions for RNA: YOR054C

VHS3, Transcript of Negative regulatory subunit of protein phosphatase 1 Ppz1p, yeastyeast

Gene VHS3, Length 2,025 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VHS3YOR054C RUB1Q03919 77 aa3.94□□□□□ -1.78
VHS3YOR054C DPB4Q04603 196 aaKnown RBP3.94□□□□□ -1.78
VHS3YOR054C THI7Q05998 598 aa3.94□□□□□ -1.78
VHS3YOR054C THI3Q07471 609 aa3.94□□□□□ -1.78
VHS3YOR054C AKR2Q12013 749 aa3.94□□□□□ -1.78
VHS3YOR054C YLR108CQ12259 485 aa3.94□□□□□ -1.78
VHS3YOR054C BI3Q9ZZW7 517 aa3.94□□□□□ -1.78
VHS3YOR054C ECM29P38737 1868 aa3.93□□□□□ -1.78
VHS3YOR054C SUC2P00724 532 aa3.93□□□□□ -1.78
VHS3YOR054C ILV1P00927 576 aaKnown RBP3.93□□□□□ -1.78
VHS3YOR054C SPS2P08459 502 aa3.93□□□□□ -1.78
VHS3YOR054C GCD1P09032 578 aaPredicted RBP3.93□□□□□ -1.78
VHS3YOR054C SPS4P09937 338 aa3.93□□□□□ -1.78
VHS3YOR054C GCY1P14065 312 aaKnown RBP RIP-Chip data3.93□□□□□ -1.78not detected
VHS3YOR054C MRPL44P19956 98 aa3.93□□□□□ -1.78
VHS3YOR054C PHO80P20052 293 aa3.93□□□□□ -1.78
VHS3YOR054C URA10P30402 227 aa3.93□□□□□ -1.78
VHS3YOR054C MCM10P32354 571 aa3.93□□□□□ -1.78
VHS3YOR054C MRPL6P32904 214 aa3.93□□□□□ -1.78
VHS3YOR054C SUI1P32911 108 aaKnown RBP3.93□□□□□ -1.78
VHS3YOR054C KAE1P36132 386 aa3.93□□□□□ -1.78
VHS3YOR054C ROT2P38138 954 aa3.93□□□□□ -1.78
VHS3YOR054C MBA1P38300 278 aa3.93□□□□□ -1.78
VHS3YOR054C NVJ1P38881 321 aa3.93□□□□□ -1.78
VHS3YOR054C YER010CP40011 234 aa3.93□□□□□ -1.78
VHS3YOR054C PRM2P40534 656 aa3.93□□□□□ -1.78
VHS3YOR054C HIS6P40545 261 aa3.93□□□□□ -1.78
VHS3YOR054C PTR3P43606 678 aa3.93□□□□□ -1.78
VHS3YOR054C AIF1P52923 378 aa3.93□□□□□ -1.78
VHS3YOR054C NQM1P53228 333 aaPredicted RBP3.93□□□□□ -1.78
VHS3YOR054C RRN9P53437 365 aa3.93□□□□□ -1.78
VHS3YOR054C SVL3Q03088 825 aaKnown RBP3.93□□□□□ -1.78
VHS3YOR054C UGO1Q03327 502 aa3.93□□□□□ -1.78
VHS3YOR054C TPP1Q03796 238 aa3.93□□□□□ -1.78
VHS3YOR054C RBS1Q05672 457 aaKnown RBP3.93□□□□□ -1.78
VHS3YOR054C YLR345WQ06137 509 aa3.93□□□□□ -1.78
VHS3YOR054C YOR059CQ08448 450 aaKnown RBP3.93□□□□□ -1.78
VHS3YOR054C NMD4Q12129 218 aa3.93□□□□□ -1.78
VHS3YOR054C MTR10Q99189 972 aa3.93□□□□□ -1.78
VHS3YOR054C ECM3Q99252 613 aa3.93□□□□□ -1.78
VHS3YOR054C YPR117WQ06116 2489 aa3.93□□□□□ -1.78
VHS3YOR054C TAO3P40468 2376 aa3.93□□□□□ -1.78
VHS3YOR054C YMR084WA2P2R3 262 aa3.92□□□□□ -1.78
VHS3YOR054C THP2O13539 261 aaKnown RBP3.92□□□□□ -1.78
VHS3YOR054C CYC1P00044 109 aaPredicted RBP3.92□□□□□ -1.78
VHS3YOR054C PHO5P00635 467 aa3.92□□□□□ -1.78
VHS3YOR054C ALG7P07286 448 aa3.92□□□□□ -1.78
VHS3YOR054C ERR1P0CX10 437 aa3.92□□□□□ -1.78
VHS3YOR054C ERR2P0CX11 437 aa3.92□□□□□ -1.78
VHS3YOR054C MRP1P10662 321 aaKnown RBP3.92□□□□□ -1.78
VHS3YOR054C CKS1P20486 150 aaKnown RBP3.92□□□□□ -1.78
VHS3YOR054C TRX1P22217 103 aaKnown RBP3.92□□□□□ -1.78
VHS3YOR054C SNC1P31109 117 aa3.92□□□□□ -1.78
VHS3YOR054C FUN30P31380 1131 aa3.92□□□□□ -1.78
VHS3YOR054C ARP2P32381 391 aaKnown RBP3.92□□□□□ -1.78
VHS3YOR054C ECT1P33412 323 aa3.92□□□□□ -1.78
VHS3YOR054C SDH3P33421 198 aa3.92□□□□□ -1.78
VHS3YOR054C YNK1P36010 153 aaKnown RBP3.92□□□□□ -1.78
VHS3YOR054C MRPL36P36531 177 aa3.92□□□□□ -1.78
VHS3YOR054C COS8P38723 381 aa3.92□□□□□ -1.78
VHS3YOR054C CRP1P38845 465 aaKnown RBP3.92□□□□□ -1.78
VHS3YOR054C IKI1P38874 309 aa3.92□□□□□ -1.78
VHS3YOR054C CKB2P38930 258 aa3.92□□□□□ -1.78
VHS3YOR054C YMR144WP40214 342 aaKnown RBP3.92□□□□□ -1.78
VHS3YOR054C UFE1P41834 346 aa3.92□□□□□ -1.78
VHS3YOR054C ERR3P42222 437 aa3.92□□□□□ -1.78
VHS3YOR054C TOM22P49334 152 aa3.92□□□□□ -1.78
VHS3YOR054C MRPL22P53881 309 aa3.92□□□□□ -1.78
VHS3YOR054C YNL146WP53906 100 aa3.92□□□□□ -1.78
VHS3YOR054C NAM8Q00539 523 aaKnown RBP3.92□□□□□ -1.78
VHS3YOR054C SLD5Q03406 294 aa3.92□□□□□ -1.78
VHS3YOR054C TDA1Q03533 586 aa3.92□□□□□ -1.78
VHS3YOR054C YMR160WQ03823 816 aa3.92□□□□□ -1.78
VHS3YOR054C CSN9Q03981 162 aa3.92□□□□□ -1.78
VHS3YOR054C VID22Q05934 901 aa3.92□□□□□ -1.78
VHS3YOR054C UTP21Q06078 939 aaPredicted RBP3.92□□□□□ -1.78
VHS3YOR054C FMP25Q08023 583 aa3.92□□□□□ -1.78
VHS3YOR054C RRG7Q08774 242 aaPredicted RBP3.92□□□□□ -1.78
VHS3YOR054C GUP2Q08929 609 aa3.92□□□□□ -1.78
VHS3YOR054C YOR114WQ12219 294 aa3.92□□□□□ -1.78
VHS3YOR054C PKH2Q12236 1081 aaKnown RBP3.92□□□□□ -1.78
VHS3YOR054C RKM5Q12367 367 aa3.92□□□□□ -1.78
VHS3YOR054C RTN2Q12443 393 aa3.92□□□□□ -1.78
VHS3YOR054C SUS1Q6WNK7 96 aa3.92□□□□□ -1.78
VHS3YOR054C SLH1P53327 1967 aaKnown RBP3.92□□□□□ -1.78
VHS3YOR054C TRP3P00937 484 aa3.92□□□□□ -1.78
VHS3YOR054C RPP2BP02400 110 aaKnown RBP3.92□□□□□ -1.78
VHS3YOR054C CAR2P07991 424 aaKnown RBP3.92□□□□□ -1.78
VHS3YOR054C CHS1P08004 1131 aa3.92□□□□□ -1.78
VHS3YOR054C RNR1P21524 888 aaKnown RBP3.92□□□□□ -1.78
VHS3YOR054C SSD1P24276 1250 aaKnown RBP RIP-Chip data3.92□□□□□ -1.78not detected
VHS3YOR054C DBR1P24309 405 aaKnown RBP3.92□□□□□ -1.78
VHS3YOR054C ACB1P31787 87 aa3.92□□□□□ -1.78
VHS3YOR054C NAB2P32505 525 aaKnown RBP RIP-Chip data3.92□□□□□ -1.78not detected
VHS3YOR054C SSS1P35179 80 aa3.92□□□□□ -1.78
VHS3YOR054C CSG2P35206 410 aa3.92□□□□□ -1.78
VHS3YOR054C ASK1P35734 292 aa3.92□□□□□ -1.78
VHS3YOR054C MMS4P38257 691 aa3.92□□□□□ -1.78
VHS3YOR054C SUL1P38359 859 aa3.92□□□□□ -1.78
VHS3YOR054C CBR1P38626 284 aaKnown RBP3.92□□□□□ -1.78
Retrieved 100 of 5,963 RNA–protein pairs in 30.8 ms