RNA–Protein interactions for RNA: YLR399C

BDF1, Transcript of Protein involved in transcription initiation, yeast

Gene BDF1, Length 2,061 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
BDF1	YLR399C	PEP4	P07267	405 aa	Known RBP	11.75	□□□□□ -0.53
BDF1	YLR399C	CHL1	P22516	861 aa	Predicted RBP	11.75	□□□□□ -0.53
BDF1	YLR399C	DBP1	P24784	617 aa	Known RBP	11.75	□□□□□ -0.53
BDF1	YLR399C	OAC1	P32332	324 aa		11.75	□□□□□ -0.53
BDF1	YLR399C	RPT1	P33299	467 aa	Known RBP	11.75	□□□□□ -0.53
BDF1	YLR399C	BFR1	P38934	470 aa	Known RBP RIP-Chip data	11.75	□□□□□ -0.53	not detected
BDF1	YLR399C	PAN6	P40459	309 aa		11.75	□□□□□ -0.53
BDF1	YLR399C	IGO1	P53897	168 aa		11.75	□□□□□ -0.53
BDF1	YLR399C	HXT11	P54862	567 aa		11.75	□□□□□ -0.53
BDF1	YLR399C	SPP1	Q03012	353 aa		11.75	□□□□□ -0.53
BDF1	YLR399C	YOS9	Q99220	542 aa		11.75	□□□□□ -0.53
BDF1	YLR399C	KAR1	P11927	433 aa		11.74	□□□□□ -0.53
BDF1	YLR399C	SEC17	P32602	292 aa		11.74	□□□□□ -0.53
BDF1	YLR399C	EFM6	P53970	246 aa		11.74	□□□□□ -0.53
BDF1	YLR399C	PLB2	Q03674	706 aa		11.74	□□□□□ -0.53
BDF1	YLR399C	HRD3	Q05787	833 aa		11.74	□□□□□ -0.53
BDF1	YLR399C	NNT1	Q05874	261 aa		11.74	□□□□□ -0.53
BDF1	YLR399C	GPN3	Q06543	272 aa		11.74	□□□□□ -0.53
BDF1	YLR399C	PLB3	Q08108	686 aa		11.74	□□□□□ -0.53
BDF1	YLR399C	YTM1	Q12024	460 aa	Predicted RBP	11.74	□□□□□ -0.53
BDF1	YLR399C	NMD4	Q12129	218 aa		11.74	□□□□□ -0.53
BDF1	YLR399C	YPR022C	Q12139	1133 aa		11.74	□□□□□ -0.53
BDF1	YLR399C	DGK1	Q12382	290 aa		11.74	□□□□□ -0.53
BDF1	YLR399C	TY1A-DR4	O74302	440 aa		11.74	□□□□□ -0.53
BDF1	YLR399C	TY1A-A	P0CX57	440 aa		11.74	□□□□□ -0.53
BDF1	YLR399C	TY1A-PR1	P0CX58	440 aa		11.74	□□□□□ -0.53
BDF1	YLR399C	TY1A-OR	P0CX59	440 aa		11.74	□□□□□ -0.53
BDF1	YLR399C	TY1A-PR2	P0CX60	440 aa		11.74	□□□□□ -0.53
BDF1	YLR399C	TY1A-DR5	P0CX65	440 aa		11.74	□□□□□ -0.53
BDF1	YLR399C	TY1A-ER2	P0CX66	440 aa		11.74	□□□□□ -0.53
BDF1	YLR399C	TY1A-GR3	P0CX67	440 aa		11.74	□□□□□ -0.53
BDF1	YLR399C	TY1A-LR1	P0CX68	440 aa		11.74	□□□□□ -0.53
BDF1	YLR399C	TY1A-MR2	P0CX69	440 aa		11.74	□□□□□ -0.53
BDF1	YLR399C	GLN3	P18494	730 aa		11.74	□□□□□ -0.53
BDF1	YLR399C	MSM1	P22438	575 aa		11.74	□□□□□ -0.53
BDF1	YLR399C	SYP1	P25623	870 aa	Known RBP	11.74	□□□□□ -0.53
BDF1	YLR399C	MF(ALPHA)2	P32435	120 aa		11.74	□□□□□ -0.53
BDF1	YLR399C	YBL010C	P32788	280 aa		11.74	□□□□□ -0.53
BDF1	YLR399C	TY1A-JR2	P47099	440 aa		11.74	□□□□□ -0.53
BDF1	YLR399C	VPS73	P53142	486 aa	Known RBP	11.74	□□□□□ -0.53
BDF1	YLR399C	MSS11	Q03825	758 aa		11.74	□□□□□ -0.53
BDF1	YLR399C	TY1A-DR1	Q03856	440 aa		11.74	□□□□□ -0.53
BDF1	YLR399C	TY1A-ML1	Q04706	440 aa	Known RBP	11.74	□□□□□ -0.53
BDF1	YLR399C	TY1A-BR	Q12217	440 aa		11.74	□□□□□ -0.53
BDF1	YLR399C	TY1A-NL2	Q12470	440 aa		11.74	□□□□□ -0.53
BDF1	YLR399C	TY1A-GR2	Q12485	440 aa		11.74	□□□□□ -0.53
BDF1	YLR399C	HRP1	Q99383	534 aa	Known RBP	11.74	□□□□□ -0.53
BDF1	YLR399C	PDC2	P32896	925 aa		11.73	□□□□□ -0.53
BDF1	YLR399C	VAM7	P32912	316 aa		11.73	□□□□□ -0.53
BDF1	YLR399C	YHR035W	P38769	630 aa		11.73	□□□□□ -0.53
BDF1	YLR399C	IRC7	P43623	340 aa		11.73	□□□□□ -0.53
BDF1	YLR399C	FOL2	P51601	243 aa	Known RBP	11.73	□□□□□ -0.53
BDF1	YLR399C	HOS2	P53096	452 aa	Predicted RBP	11.73	□□□□□ -0.53
BDF1	YLR399C	RPN5	Q12250	445 aa	Known RBP	11.73	□□□□□ -0.53
BDF1	YLR399C	RPS1B	P23248	255 aa	Known RBP	11.72	□□□□□ -0.53
BDF1	YLR399C	YKL151C	P36059	337 aa		11.72	□□□□□ -0.53
BDF1	YLR399C	ALY1	P36117	915 aa		11.72	□□□□□ -0.53
BDF1	YLR399C	TAT1	P38085	619 aa		11.72	□□□□□ -0.53
BDF1	YLR399C	URA8	P38627	578 aa	Predicted RBP	11.72	□□□□□ -0.53
BDF1	YLR399C	LAG1	P38703	411 aa		11.72	□□□□□ -0.53
BDF1	YLR399C	NSG1	P38837	291 aa		11.72	□□□□□ -0.53
BDF1	YLR399C	AIM10	P39965	576 aa	Known RBP	11.72	□□□□□ -0.53
BDF1	YLR399C	YMR144W	P40214	342 aa	Known RBP	11.72	□□□□□ -0.53
BDF1	YLR399C	BUD9	P53226	547 aa		11.72	□□□□□ -0.53
BDF1	YLR399C	PEF1	P53238	335 aa		11.72	□□□□□ -0.53
BDF1	YLR399C	IRC15	Q02733	499 aa		11.72	□□□□□ -0.53
BDF1	YLR399C	YLR149C	Q99296	730 aa		11.72	□□□□□ -0.53
BDF1	YLR399C	RNA14	P25298	677 aa	Known RBP	11.72	□□□□□ -0.53
BDF1	YLR399C	COQ2	P32378	372 aa		11.72	□□□□□ -0.53
BDF1	YLR399C	PET127	P32606	800 aa		11.72	□□□□□ -0.53
BDF1	YLR399C	APL3	P38065	1025 aa		11.72	□□□□□ -0.53
BDF1	YLR399C	CDS1	P38221	457 aa		11.72	□□□□□ -0.53
BDF1	YLR399C	RGI2	P40188	164 aa		11.72	□□□□□ -0.53
BDF1	YLR399C	YIL077C	P40508	320 aa		11.72	□□□□□ -0.53
BDF1	YLR399C	GTT1	P40582	234 aa		11.72	□□□□□ -0.53
BDF1	YLR399C	BFA1	P47113	574 aa		11.72	□□□□□ -0.53
BDF1	YLR399C	BSC5	P53755	489 aa		11.72	□□□□□ -0.53
BDF1	YLR399C	LDB18	Q07887	179 aa		11.72	□□□□□ -0.53
BDF1	YLR399C	YOR238W	Q08634	303 aa		11.72	□□□□□ -0.53
BDF1	YLR399C	YLR108C	Q12259	485 aa		11.72	□□□□□ -0.53
BDF1	YLR399C	ARE1	P25628	610 aa		11.71	□□□□□ -0.53
BDF1	YLR399C	SFP1	P32432	683 aa		11.71	□□□□□ -0.53
BDF1	YLR399C	YPT7	P32939	208 aa		11.71	□□□□□ -0.53
BDF1	YLR399C	COS111	P38308	924 aa		11.71	□□□□□ -0.53
BDF1	YLR399C	YLR446W	Q06204	433 aa		11.71	□□□□□ -0.53
BDF1	YLR399C	HBT1	Q07653	1046 aa	Known RBP	11.71	□□□□□ -0.53
BDF1	YLR399C	SIR2	P06700	562 aa		11.71	□□□□□ -0.54
BDF1	YLR399C	TFS1	P14306	219 aa		11.71	□□□□□ -0.54
BDF1	YLR399C	UTR1	P21373	530 aa		11.71	□□□□□ -0.54
BDF1	YLR399C	BUD5	P25300	642 aa	Predicted RBP	11.71	□□□□□ -0.54
BDF1	YLR399C	SRB6	P32570	121 aa		11.71	□□□□□ -0.54
BDF1	YLR399C	ASC1	P38011	319 aa	Known RBP	11.71	□□□□□ -0.54
BDF1	YLR399C	YBR063C	P38083	404 aa		11.71	□□□□□ -0.54
BDF1	YLR399C	IMD2	P38697	523 aa	Known RBP	11.71	□□□□□ -0.54
BDF1	YLR399C	ALG8	P40351	577 aa		11.71	□□□□□ -0.54
BDF1	YLR399C	BAP3	P41815	604 aa		11.71	□□□□□ -0.54
BDF1	YLR399C	DLD2	P46681	530 aa	Known RBP	11.71	□□□□□ -0.54
BDF1	YLR399C	CWC24	P53769	259 aa		11.71	□□□□□ -0.54
BDF1	YLR399C	GAD1	Q04792	585 aa		11.71	□□□□□ -0.54
BDF1	YLR399C	MRPL35	Q06678	367 aa		11.71	□□□□□ -0.54

Retrieved 100 of 5,963 RNA–protein pairs in 48.3 ms