RNA–Protein interactions for RNA: YKR072C

SIS2, Transcript of Negative regulatory subunit of protein phosphatase 1 (Ppz1p), yeast

Gene SIS2, Length 1,689 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SIS2	YKR072C	MRX5	P47007	382 aa		4.74	□□□□□ -1.65
SIS2	YKR072C	RMR1	P53060	241 aa		4.74	□□□□□ -1.65
SIS2	YKR072C	MRPL50	P53724	139 aa		4.74	□□□□□ -1.65
SIS2	YKR072C	BET4	Q00618	327 aa		4.74	□□□□□ -1.65
SIS2	YKR072C	MYO5	Q04439	1219 aa	Known RBP	4.74	□□□□□ -1.65
SIS2	YKR072C	DUS4	Q06063	367 aa		4.74	□□□□□ -1.65
SIS2	YKR072C	PAM18	Q07914	168 aa		4.74	□□□□□ -1.65
SIS2	YKR072C	YOL075C	Q08234	1294 aa		4.74	□□□□□ -1.65
SIS2	YKR072C	IRC13	Q08630	104 aa		4.74	□□□□□ -1.65
SIS2	YKR072C	RAX1	Q08760	435 aa		4.74	□□□□□ -1.65
SIS2	YKR072C	SLF1	Q12034	447 aa	Known RBP	4.74	□□□□□ -1.65
SIS2	YKR072C	NCE102	Q12207	173 aa	RIP-Chip data	4.74	□□□□□ -1.65	not detected
SIS2	YKR072C	PRP46	Q12417	451 aa	Predicted RBP	4.74	□□□□□ -1.65
SIS2	YKR072C	RGS2	Q99188	309 aa		4.74	□□□□□ -1.65
SIS2	YKR072C	UBA3	Q99344	299 aa		4.74	□□□□□ -1.65
SIS2	YKR072C	TY1B-DR3	Q99231	1755 aa		4.74	□□□□□ -1.65
SIS2	YKR072C	COX2	P00410	251 aa		4.73	□□□□□ -1.65
SIS2	YKR072C	CHS1	P08004	1131 aa		4.73	□□□□□ -1.65
SIS2	YKR072C	STE4	P18851	423 aa		4.73	□□□□□ -1.65
SIS2	YKR072C	ZRC1	P20107	442 aa		4.73	□□□□□ -1.65
SIS2	YKR072C	ACH1	P32316	526 aa		4.73	□□□□□ -1.65
SIS2	YKR072C	PPS1	P38148	807 aa		4.73	□□□□□ -1.65
SIS2	YKR072C	BNA4	P38169	460 aa		4.73	□□□□□ -1.65
SIS2	YKR072C	TCM62	P38228	572 aa	Known RBP	4.73	□□□□□ -1.65
SIS2	YKR072C	RFC4	P40339	323 aa	Known RBP	4.73	□□□□□ -1.65
SIS2	YKR072C	HXT9	P40885	567 aa		4.73	□□□□□ -1.65
SIS2	YKR072C	SNO2	P53823	222 aa		4.73	□□□□□ -1.65
SIS2	YKR072C	HXT11	P54862	567 aa		4.73	□□□□□ -1.65
SIS2	YKR072C	YMR087W	Q04299	284 aa		4.73	□□□□□ -1.65
SIS2	YKR072C	GIM5	Q04493	163 aa		4.73	□□□□□ -1.65
SIS2	YKR072C	YMR226C	Q05016	267 aa	Known RBP	4.73	□□□□□ -1.65
SIS2	YKR072C	FUS2	Q05670	677 aa		4.73	□□□□□ -1.65
SIS2	YKR072C	COQ11	Q05892	277 aa		4.73	□□□□□ -1.65
SIS2	YKR072C	ACK1	Q07622	623 aa	Predicted RBP	4.73	□□□□□ -1.65
SIS2	YKR072C	ENB1	Q08299	606 aa		4.73	□□□□□ -1.65
SIS2	YKR072C	AFT2	Q08957	416 aa		4.73	□□□□□ -1.65
SIS2	YKR072C	YOR029W	Q12243	111 aa		4.73	□□□□□ -1.65
SIS2	YKR072C	AIM45	Q12480	344 aa	Known RBP	4.73	□□□□□ -1.65
SIS2	YKR072C	FSH3	Q99369	266 aa		4.73	□□□□□ -1.65
SIS2	YKR072C	MATALPHA1	P0CY06	175 aa		4.73	□□□□□ -1.65
SIS2	YKR072C	HMLALPHA1	P0CY07	175 aa		4.73	□□□□□ -1.65
SIS2	YKR072C	RPL24B	P24000	155 aa	Known RBP	4.73	□□□□□ -1.65
SIS2	YKR072C	COQ2	P32378	372 aa		4.73	□□□□□ -1.65
SIS2	YKR072C	SBE22	P38814	852 aa		4.73	□□□□□ -1.65
SIS2	YKR072C	FMP52	P40008	231 aa		4.73	□□□□□ -1.65
SIS2	YKR072C	GLG2	P47011	380 aa		4.73	□□□□□ -1.65
SIS2	YKR072C	PRY1	P47032	299 aa		4.73	□□□□□ -1.65
SIS2	YKR072C	LIF1	P53150	421 aa		4.73	□□□□□ -1.65
SIS2	YKR072C	CUS2	P53830	285 aa	Predicted RBP	4.73	□□□□□ -1.65
SIS2	YKR072C	NOP13	P53883	403 aa	Known RBP RIP-Chip data	4.73	□□□□□ -1.65	not detected
SIS2	YKR072C	HSP31	Q04432	237 aa		4.73	□□□□□ -1.65
SIS2	YKR072C	GFD1	Q04839	188 aa	Known RBP	4.73	□□□□□ -1.65
SIS2	YKR072C	BUR2	Q05949	395 aa		4.73	□□□□□ -1.65
SIS2	YKR072C	GMC2	Q06201	188 aa		4.73	□□□□□ -1.65
SIS2	YKR072C	PIG1	Q06216	648 aa		4.73	□□□□□ -1.65
SIS2	YKR072C	TRP4	P07285	380 aa	Predicted RBP	4.72	□□□□□ -1.65
SIS2	YKR072C	MRP2	P10663	115 aa	Predicted RBP	4.72	□□□□□ -1.65
SIS2	YKR072C	RNR3	P21672	869 aa	Known RBP	4.72	□□□□□ -1.65
SIS2	YKR072C	DBR1	P24309	405 aa	Known RBP	4.72	□□□□□ -1.65
SIS2	YKR072C	COS9	P36034	407 aa		4.72	□□□□□ -1.65
SIS2	YKR072C	MRPL10	P36520	322 aa		4.72	□□□□□ -1.65
SIS2	YKR072C	EGD2	P38879	174 aa	Known RBP	4.72	□□□□□ -1.65
SIS2	YKR072C	CCT2	P39076	527 aa	Known RBP	4.72	□□□□□ -1.65
SIS2	YKR072C	YER079W	P40052	210 aa	Known RBP	4.72	□□□□□ -1.65
SIS2	YKR072C	YMR134W	P40207	237 aa		4.72	□□□□□ -1.65
SIS2	YKR072C	SDS3	P40505	327 aa		4.72	□□□□□ -1.65
SIS2	YKR072C	SAS2	P40963	338 aa		4.72	□□□□□ -1.65
SIS2	YKR072C	POP1	P41812	875 aa		4.72	□□□□□ -1.65
SIS2	YKR072C	SNG1	P46950	547 aa		4.72	□□□□□ -1.65
SIS2	YKR072C	RTC4	P53850	401 aa		4.72	□□□□□ -1.65
SIS2	YKR072C	DUG3	P53871	357 aa		4.72	□□□□□ -1.65
SIS2	YKR072C	PFA5	Q03289	374 aa		4.72	□□□□□ -1.65
SIS2	YKR072C	IZH1	Q03419	316 aa		4.72	□□□□□ -1.65
SIS2	YKR072C	YLR224W	Q05947	369 aa		4.72	□□□□□ -1.65
SIS2	YKR072C	GRS2	Q06817	618 aa		4.72	□□□□□ -1.65
SIS2	YKR072C	DST1	P07273	309 aa		4.71	□□□□□ -1.66
SIS2	YKR072C	RPS16A	P0CX51	143 aa	Known RBP	4.71	□□□□□ -1.66
SIS2	YKR072C	RPS16B	P0CX52	143 aa	Known RBP	4.71	□□□□□ -1.66
SIS2	YKR072C	WHI2	P12611	486 aa		4.71	□□□□□ -1.66
SIS2	YKR072C	FRS2	P15625	503 aa	Known RBP	4.71	□□□□□ -1.66
SIS2	YKR072C	MET16	P18408	261 aa	Predicted RBP	4.71	□□□□□ -1.66
SIS2	YKR072C	APA2	P22108	325 aa		4.71	□□□□□ -1.66
SIS2	YKR072C	RAD57	P25301	460 aa		4.71	□□□□□ -1.66
SIS2	YKR072C	MRPL9	P31334	269 aa		4.71	□□□□□ -1.66
SIS2	YKR072C	CBP4	P37267	147 aa		4.71	□□□□□ -1.66
SIS2	YKR072C	STP2	P38704	541 aa		4.71	□□□□□ -1.66
SIS2	YKR072C	YJL163C	P46996	555 aa		4.71	□□□□□ -1.66
SIS2	YKR072C	NUP53	Q03790	475 aa		4.71	□□□□□ -1.66
SIS2	YKR072C	RRP17	Q04031	235 aa	Predicted RBP	4.71	□□□□□ -1.66
SIS2	YKR072C	AIM33	Q04516	312 aa		4.71	□□□□□ -1.66
SIS2	YKR072C	RNH203	Q12338	110 aa		4.71	□□□□□ -1.66
SIS2	YKR072C	DRS2	P39524	1355 aa		4.71	□□□□□ -1.66
SIS2	YKR072C	RAD7	P06779	565 aa		4.7	□□□□□ -1.66
SIS2	YKR072C	CHO1	P08456	276 aa		4.7	□□□□□ -1.66
SIS2	YKR072C	TKL1	P23254	680 aa	Known RBP	4.7	□□□□□ -1.66
SIS2	YKR072C	SLM5	P25345	492 aa	Known RBP	4.7	□□□□□ -1.66
SIS2	YKR072C	SAC1	P32368	623 aa	Known RBP	4.7	□□□□□ -1.66
SIS2	YKR072C	PTR2	P32901	601 aa		4.7	□□□□□ -1.66
SIS2	YKR072C	GDH2	P33327	1092 aa	Known RBP	4.7	□□□□□ -1.66
SIS2	YKR072C	UBA4	P38820	440 aa		4.7	□□□□□ -1.66

Retrieved 100 of 5,963 RNA–protein pairs in 27.8 ms