RNA–Protein interactions for RNA: YHR052W

CIC1, Transcript of Essential protein that interacts with proteasome components, yeastyeast

Gene CIC1, Length 1,131 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CIC1YHR052W AIM24P47127 394 aa2.28□□□□□ -2.04
CIC1YHR052W YPS5P53057 165 aa2.28□□□□□ -2.04
CIC1YHR052W YGR018CP53211 109 aa2.28□□□□□ -2.04
CIC1YHR052W TDA1Q03533 586 aa2.28□□□□□ -2.04
CIC1YHR052W DCS1Q06151 350 aa2.28□□□□□ -2.04
CIC1YHR052W SMC5Q08204 1093 aa2.28□□□□□ -2.04
CIC1YHR052W BUD21Q08492 214 aaPredicted RBP2.28□□□□□ -2.04
CIC1YHR052W EAF3Q12432 401 aa2.28□□□□□ -2.04
CIC1YHR052W CCH1P50077 2039 aa2.27□□□□□ -2.05
CIC1YHR052W COX3P00420 269 aa2.27□□□□□ -2.05
CIC1YHR052W CBP6P07253 162 aaPredicted RBP2.27□□□□□ -2.05
CIC1YHR052W BRF1P29056 596 aa2.27□□□□□ -2.05
CIC1YHR052W DPH2P32461 534 aa2.27□□□□□ -2.05
CIC1YHR052W CYS4P32582 507 aaKnown RBP2.27□□□□□ -2.05
CIC1YHR052W ATP3P38077 311 aaKnown RBP2.27□□□□□ -2.05
CIC1YHR052W MAM33P40513 266 aa2.27□□□□□ -2.05
CIC1YHR052W YPS6P40583 537 aa2.27□□□□□ -2.05
CIC1YHR052W HAC1P41546 238 aa2.27□□□□□ -2.05
CIC1YHR052W COS1P53822 381 aa2.27□□□□□ -2.05
CIC1YHR052W STD1Q02794 444 aa2.27□□□□□ -2.05
CIC1YHR052W YMR102CQ03177 834 aa2.27□□□□□ -2.05
CIC1YHR052W YMR130WQ04223 302 aa2.27□□□□□ -2.05
CIC1YHR052W AIM32Q04689 311 aa2.27□□□□□ -2.05
CIC1YHR052W ROY1Q04847 553 aa2.27□□□□□ -2.05
CIC1YHR052W ADH1P00330 348 aaKnown RBP2.26□□□□□ -2.05
CIC1YHR052W REC107P21651 314 aa2.26□□□□□ -2.05
CIC1YHR052W TOS3P43637 560 aa2.26□□□□□ -2.05
CIC1YHR052W CLD1P53264 445 aa2.26□□□□□ -2.05
CIC1YHR052W YGR250CP53316 781 aaKnown RBP2.26□□□□□ -2.05
CIC1YHR052W SKI8Q02793 397 aaPredicted RBP2.26□□□□□ -2.05
CIC1YHR052W MMT1Q03218 510 aa2.26□□□□□ -2.05
CIC1YHR052W ACL4Q03771 387 aa2.26□□□□□ -2.05
CIC1YHR052W YPR091CQ06833 770 aa2.26□□□□□ -2.05
CIC1YHR052W LOT6Q07923 191 aa2.26□□□□□ -2.05
CIC1YHR052W SFI1Q12369 946 aa2.26□□□□□ -2.05
CIC1YHR052W NCA2Q12374 616 aa2.26□□□□□ -2.05
CIC1YHR052W CEX1Q12453 761 aa2.26□□□□□ -2.05
CIC1YHR052W NAG1Q8TGN9 163 aa2.26□□□□□ -2.05
CIC1YHR052W YCR051WP25631 222 aa2.25□□□□□ -2.05
CIC1YHR052W TOM22P49334 152 aa2.25□□□□□ -2.05
CIC1YHR052W FLC3P53121 802 aa2.25□□□□□ -2.05
CIC1YHR052W YLR287CQ05881 355 aa2.25□□□□□ -2.05
CIC1YHR052W MED2Q12124 431 aa2.25□□□□□ -2.05
CIC1YHR052W PIS1P06197 220 aaKnown RBP2.24□□□□□ -2.05
CIC1YHR052W CDC31P06704 161 aaKnown RBP2.24□□□□□ -2.05
CIC1YHR052W MRPL27P36526 146 aaPredicted RBP2.24□□□□□ -2.05
CIC1YHR052W GPI18P38211 433 aa2.24□□□□□ -2.05
CIC1YHR052W LSM5P40089 93 aaKnown RBP2.24□□□□□ -2.05
CIC1YHR052W GAT2P40209 560 aa2.24□□□□□ -2.05
CIC1YHR052W YGL262WP53054 175 aa2.24□□□□□ -2.05
CIC1YHR052W ALF1P53904 254 aa2.24□□□□□ -2.05
CIC1YHR052W TPS1Q00764 495 aaKnown RBP2.24□□□□□ -2.05
CIC1YHR052W YMR155WQ03795 547 aa2.24□□□□□ -2.05
CIC1YHR052W PRM6Q04705 352 aa2.24□□□□□ -2.05
CIC1YHR052W SCM3Q12334 223 aa2.24□□□□□ -2.05
CIC1YHR052W YCR024C-BQ3E7Z8 88 aa2.24□□□□□ -2.05
CIC1YHR052W AFI1Q99222 893 aa2.24□□□□□ -2.05
CIC1YHR052W BI3Q9ZZW7 517 aa2.24□□□□□ -2.05
CIC1YHR052W ZRC1P20107 442 aa2.23□□□□□ -2.05
CIC1YHR052W YEF1P32622 495 aa2.23□□□□□ -2.05
CIC1YHR052W NOC2P39744 710 aaKnown RBP2.23□□□□□ -2.05
CIC1YHR052W RRP46P53256 223 aaPredicted RBP2.23□□□□□ -2.05
CIC1YHR052W BNI5P53890 448 aaKnown RBP2.23□□□□□ -2.05
CIC1YHR052W RPN9Q04062 393 aaKnown RBP2.23□□□□□ -2.05
CIC1YHR052W MMR1Q06324 491 aa2.23□□□□□ -2.05
CIC1YHR052W MTR10Q99189 972 aa2.23□□□□□ -2.05
CIC1YHR052W RPN12P32496 274 aa2.22□□□□□ -2.05
CIC1YHR052W HEL1P36113 551 aa2.22□□□□□ -2.05
CIC1YHR052W SLM4P38247 162 aa2.22□□□□□ -2.05
CIC1YHR052W BMT2P38278 337 aa2.22□□□□□ -2.05
CIC1YHR052W YNL208WP40159 199 aaKnown RBP2.22□□□□□ -2.05
CIC1YHR052W IGD1P43598 195 aa2.22□□□□□ -2.05
CIC1YHR052W YIP5P53108 310 aa2.22□□□□□ -2.05
CIC1YHR052W RPT4P53549 437 aaKnown RBP2.22□□□□□ -2.05
CIC1YHR052W KTR6P54070 446 aa2.22□□□□□ -2.05
CIC1YHR052W PIN3Q06449 215 aa2.22□□□□□ -2.05
CIC1YHR052W YDL114WQ07530 308 aa2.22□□□□□ -2.05
CIC1YHR052W PRM7Q12459 698 aa2.22□□□□□ -2.05
CIC1YHR052W POM152P39685 1337 aa2.21□□□□□ -2.06
CIC1YHR052W DST1P07273 309 aa2.21□□□□□ -2.06
CIC1YHR052W ASC1P38011 319 aaKnown RBP2.21□□□□□ -2.06
CIC1YHR052W DTR1P38125 572 aa2.21□□□□□ -2.06
CIC1YHR052W PFS1P38872 237 aa2.21□□□□□ -2.06
CIC1YHR052W YER079WP40052 210 aaKnown RBP2.21□□□□□ -2.06
CIC1YHR052W VHS2P40463 436 aa2.21□□□□□ -2.06
CIC1YHR052W CAK1P43568 368 aaPredicted RBP2.21□□□□□ -2.06
CIC1YHR052W HOT1Q03213 719 aa2.21□□□□□ -2.06
CIC1YHR052W PRP42Q03776 544 aaKnown RBP2.21□□□□□ -2.06
CIC1YHR052W RUP1Q12242 671 aa2.21□□□□□ -2.06
CIC1YHR052W YPS3Q12303 508 aa2.21□□□□□ -2.06
CIC1YHR052W RAX2Q12465 1220 aa2.21□□□□□ -2.06
CIC1YHR052W FOL3Q12676 427 aaPredicted RBP2.21□□□□□ -2.06
CIC1YHR052W PAB1P04147 577 aaKnown RBP RIP-Chip data2.2□□□□□ -2.06not detected
CIC1YHR052W ATP1P07251 545 aaKnown RBP2.2□□□□□ -2.06
CIC1YHR052W SSC1P0CS90 654 aaKnown RBP2.2□□□□□ -2.06
CIC1YHR052W URA7P28274 579 aaKnown RBP2.2□□□□□ -2.06
CIC1YHR052W FUN26P31381 517 aa2.2□□□□□ -2.06
CIC1YHR052W DEP1P31385 405 aa2.2□□□□□ -2.06
CIC1YHR052W COX13P32799 129 aa2.2□□□□□ -2.06
CIC1YHR052W STP2P38704 541 aa2.2□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 17.8 ms