RNA–Protein interactions for RNA: YDR393W

SHE9, Transcript of Protein required for normal mitochondrial morphology, yeast

Gene SHE9, Length 1,371 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SHE9	YDR393W	RRI2	Q12348	645 aa		2.19	□□□□□ -2.06
SHE9	YDR393W	UFD4	P33202	1483 aa		2.19	□□□□□ -2.06
SHE9	YDR393W	DNF1	P32660	1571 aa		2.18	□□□□□ -2.06
SHE9	YDR393W	SAL1	D6W196	494 aa		2.18	□□□□□ -2.06
SHE9	YDR393W	DPH5	P32469	300 aa	Predicted RBP	2.18	□□□□□ -2.06
SHE9	YDR393W	PTK1	P36002	662 aa	Predicted RBP	2.18	□□□□□ -2.06
SHE9	YDR393W	YHK8	P38776	514 aa		2.18	□□□□□ -2.06
SHE9	YDR393W	CHL4	P38907	458 aa		2.18	□□□□□ -2.06
SHE9	YDR393W	HAC1	P41546	238 aa		2.18	□□□□□ -2.06
SHE9	YDR393W	AIM24	P47127	394 aa		2.18	□□□□□ -2.06
SHE9	YDR393W	JJJ1	P53863	590 aa		2.18	□□□□□ -2.06
SHE9	YDR393W	TIM10	P87108	93 aa		2.18	□□□□□ -2.06
SHE9	YDR393W	VTA1	Q06263	330 aa		2.18	□□□□□ -2.06
SHE9	YDR393W	MYO2	P19524	1574 aa	Known RBP	2.18	□□□□□ -2.06
SHE9	YDR393W	PUT4	P15380	627 aa		2.17	□□□□□ -2.06
SHE9	YDR393W	CKA1	P15790	372 aa		2.17	□□□□□ -2.06
SHE9	YDR393W	YME2	P32843	850 aa		2.17	□□□□□ -2.06
SHE9	YDR393W	APE3	P37302	537 aa	Known RBP	2.17	□□□□□ -2.06
SHE9	YDR393W	GIP3	Q03016	1276 aa		2.17	□□□□□ -2.06
SHE9	YDR393W	TDA1	Q03533	586 aa		2.17	□□□□□ -2.06
SHE9	YDR393W	CCE1	Q03702	353 aa		2.17	□□□□□ -2.06
SHE9	YDR393W	TAF12	Q03761	539 aa		2.17	□□□□□ -2.06
SHE9	YDR393W	RPA190	P10964	1664 aa	Known RBP	2.17	□□□□□ -2.06
SHE9	YDR393W	GEA2	P39993	1459 aa	Known RBP	2.16	□□□□□ -2.06
SHE9	YDR393W	SSK2	P53599	1579 aa		2.16	□□□□□ -2.06
SHE9	YDR393W	MET17	P06106	444 aa		2.16	□□□□□ -2.06
SHE9	YDR393W	HXT3	P32466	567 aa	Known RBP	2.16	□□□□□ -2.06
SHE9	YDR393W	PFS1	P38872	237 aa		2.16	□□□□□ -2.06
SHE9	YDR393W	SMF1	P38925	575 aa		2.16	□□□□□ -2.06
SHE9	YDR393W	CLD1	P53264	445 aa		2.16	□□□□□ -2.06
SHE9	YDR393W	TSR2	Q06672	205 aa	Known RBP	2.16	□□□□□ -2.06
SHE9	YDR393W	SMC5	Q08204	1093 aa		2.16	□□□□□ -2.06
SHE9	YDR393W	GRX6	Q12438	231 aa		2.16	□□□□□ -2.06
SHE9	YDR393W	DRS2	P39524	1355 aa		2.16	□□□□□ -2.06
SHE9	YDR393W	RPO31	P04051	1460 aa		2.16	□□□□□ -2.06
SHE9	YDR393W	CHD1	P32657	1468 aa		2.16	□□□□□ -2.06
SHE9	YDR393W	TPI1	P00942	248 aa	Known RBP	2.15	□□□□□ -2.07
SHE9	YDR393W	RPL3	P14126	387 aa	Known RBP	2.15	□□□□□ -2.07
SHE9	YDR393W	TFB1	P32776	642 aa		2.15	□□□□□ -2.07
SHE9	YDR393W	SOR1	P35497	357 aa	Known RBP	2.15	□□□□□ -2.07
SHE9	YDR393W	IRC6	P43615	237 aa		2.15	□□□□□ -2.07
SHE9	YDR393W	CPR7	P47103	393 aa		2.15	□□□□□ -2.07
SHE9	YDR393W	FMS1	P50264	508 aa		2.15	□□□□□ -2.07
SHE9	YDR393W	MNP1	P53163	194 aa	Predicted RBP	2.15	□□□□□ -2.07
SHE9	YDR393W	MRPL19	P53875	158 aa		2.15	□□□□□ -2.07
SHE9	YDR393W	SOR2	Q07786	357 aa		2.15	□□□□□ -2.07
SHE9	YDR393W	SIL1	Q08199	421 aa		2.15	□□□□□ -2.07
SHE9	YDR393W	HSP42	Q12329	375 aa		2.15	□□□□□ -2.07
SHE9	YDR393W	APC2	Q12440	853 aa		2.15	□□□□□ -2.07
SHE9	YDR393W	CLC1	P17891	233 aa		2.14	□□□□□ -2.07
SHE9	YDR393W	RHB1	P25378	209 aa		2.14	□□□□□ -2.07
SHE9	YDR393W	KRE2	P27809	442 aa		2.14	□□□□□ -2.07
SHE9	YDR393W	AGA2	P32781	87 aa		2.14	□□□□□ -2.07
SHE9	YDR393W	MAM33	P40513	266 aa		2.14	□□□□□ -2.07
SHE9	YDR393W	RPS0B	P46654	252 aa	Known RBP	2.14	□□□□□ -2.07
SHE9	YDR393W	RRP9	Q06506	573 aa	Known RBP	2.14	□□□□□ -2.07
SHE9	YDR393W	BUD21	Q08492	214 aa	Predicted RBP	2.14	□□□□□ -2.07
SHE9	YDR393W	ROX1	P25042	368 aa		2.13	□□□□□ -2.07
SHE9	YDR393W	DEP1	P31385	405 aa		2.13	□□□□□ -2.07
SHE9	YDR393W	FRT2	P39734	528 aa		2.13	□□□□□ -2.07
SHE9	YDR393W	SPO73	P40031	143 aa		2.13	□□□□□ -2.07
SHE9	YDR393W	RPN14	P53196	417 aa		2.13	□□□□□ -2.07
SHE9	YDR393W	YGR067C	P53243	804 aa		2.13	□□□□□ -2.07
SHE9	YDR393W	SUB1	P54000	292 aa	Known RBP	2.13	□□□□□ -2.07
SHE9	YDR393W	TIR4	Q12218	487 aa	Predicted RBP	2.13	□□□□□ -2.07
SHE9	YDR393W	EAF3	Q12432	401 aa		2.13	□□□□□ -2.07
SHE9	YDR393W	IRC20	Q06554	1556 aa		2.12	□□□□□ -2.07
SHE9	YDR393W	TY1B-A	O13527	1196 aa	Known RBP	2.12	□□□□□ -2.07
SHE9	YDR393W	SRV2	P17555	526 aa	Known RBP	2.12	□□□□□ -2.07
SHE9	YDR393W	CLB3	P24870	427 aa		2.12	□□□□□ -2.07
SHE9	YDR393W	GEX1	P25596	615 aa		2.12	□□□□□ -2.07
SHE9	YDR393W	BEM1	P29366	551 aa		2.12	□□□□□ -2.07
SHE9	YDR393W	NTC20	P38302	140 aa	Predicted RBP	2.12	□□□□□ -2.07
SHE9	YDR393W	YNL208W	P40159	199 aa	Known RBP	2.12	□□□□□ -2.07
SHE9	YDR393W	NDE1	P40215	560 aa		2.12	□□□□□ -2.07
SHE9	YDR393W	YGR250C	P53316	781 aa	Known RBP	2.12	□□□□□ -2.07
SHE9	YDR393W	RPL21A	Q02753	160 aa	Known RBP	2.12	□□□□□ -2.07
SHE9	YDR393W	RKM1	Q08961	583 aa	Predicted RBP	2.12	□□□□□ -2.07
SHE9	YDR393W	RPL21B	Q12672	160 aa	Known RBP	2.12	□□□□□ -2.07
SHE9	YDR393W	PAN1	P32521	1480 aa		2.12	□□□□□ -2.07
SHE9	YDR393W	YPK9	Q12697	1472 aa		2.12	□□□□□ -2.07
SHE9	YDR393W	RED1	P14291	827 aa		2.11	□□□□□ -2.07
SHE9	YDR393W	PHO86	P46956	311 aa		2.11	□□□□□ -2.07
SHE9	YDR393W	RRP45	Q05636	305 aa	Known RBP	2.11	□□□□□ -2.07
SHE9	YDR393W	RTN2	Q12443	393 aa		2.11	□□□□□ -2.07
SHE9	YDR393W	RKR1	Q04781	1562 aa		2.11	□□□□□ -2.07
SHE9	YDR393W	INH1	P01097	85 aa		2.1	□□□□□ -2.07
SHE9	YDR393W	RPS19A	P07280	144 aa	Known RBP	2.1	□□□□□ -2.07
SHE9	YDR393W	RPS19B	P07281	144 aa	Predicted RBP	2.1	□□□□□ -2.07
SHE9	YDR393W	RPN12	P32496	274 aa		2.1	□□□□□ -2.07
SHE9	YDR393W	YEF1	P32622	495 aa		2.1	□□□□□ -2.07
SHE9	YDR393W	NAB3	P38996	802 aa	Known RBP RIP-Chip data	2.1	□□□□□ -2.07	not detected
SHE9	YDR393W	COS1	P53822	381 aa		2.1	□□□□□ -2.07
SHE9	YDR393W	RPA49	Q01080	415 aa	Predicted RBP	2.1	□□□□□ -2.07
SHE9	YDR393W	SFI1	Q12369	946 aa		2.1	□□□□□ -2.07
SHE9	YDR393W	CEX1	Q12453	761 aa		2.1	□□□□□ -2.07
SHE9	YDR393W	ESC1	Q03661	1658 aa	Known RBP	2.1	□□□□□ -2.07
SHE9	YDR393W	SCEI	P03882	235 aa		2.1	□□□□□ -2.07
SHE9	YDR393W	REC107	P21651	314 aa		2.1	□□□□□ -2.07
SHE9	YDR393W	EXG1	P23776	448 aa	Known RBP	2.1	□□□□□ -2.07

Retrieved 100 of 5,963 RNA–protein pairs in 101.3 ms