RNA–Protein interactions for RNA: YDR054C

CDC34, Transcript of Ubiquitin-conjugating enzyme (E2), yeastyeast

Gene CDC34, Length 888 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC34YDR054C CAF4P36130 643 aa5.88□□□□□ -1.47
CDC34YDR054C ALG14P38242 237 aa5.88□□□□□ -1.47
CDC34YDR054C PSD1P39006 500 aa5.88□□□□□ -1.47
CDC34YDR054C YER034WP40022 185 aaKnown RBP5.88□□□□□ -1.47
CDC34YDR054C ATF1P40353 525 aa5.88□□□□□ -1.47
CDC34YDR054C YJL070CP40361 888 aa5.88□□□□□ -1.47
CDC34YDR054C YFR020WP43600 232 aa5.88□□□□□ -1.47
CDC34YDR054C YJR030CP47101 745 aa5.88□□□□□ -1.47
CDC34YDR054C BIR1P47134 954 aa5.88□□□□□ -1.47
CDC34YDR054C YJR149WP47177 404 aa5.88□□□□□ -1.47
CDC34YDR054C AAD10P47182 288 aa5.88□□□□□ -1.47
CDC34YDR054C GLO1P50107 326 aa5.88□□□□□ -1.47
CDC34YDR054C ZRG17P53735 605 aa5.88□□□□□ -1.47
CDC34YDR054C CSL4P53859 292 aaPredicted RBP5.88□□□□□ -1.47
CDC34YDR054C PRP38Q00723 242 aaPredicted RBP5.88□□□□□ -1.47
CDC34YDR054C YPL113CQ02961 396 aa5.88□□□□□ -1.47
CDC34YDR054C ROT1Q03691 256 aa5.88□□□□□ -1.47
CDC34YDR054C DYN3Q04949 312 aa5.88□□□□□ -1.47
CDC34YDR054C BCP1Q06338 283 aa5.88□□□□□ -1.47
CDC34YDR054C RGT2Q12300 763 aa5.88□□□□□ -1.47
CDC34YDR054C JLP1Q12358 412 aa5.88□□□□□ -1.47
CDC34YDR054C YKL018C-AQ3E7A7 99 aa5.88□□□□□ -1.47
CDC34YDR054C SRN2Q99176 213 aa5.88□□□□□ -1.47
CDC34YDR054C RPS4AP0CX35 261 aaKnown RBP5.87□□□□□ -1.47
CDC34YDR054C RPS4BP0CX36 261 aaKnown RBP5.87□□□□□ -1.47
CDC34YDR054C STE12P13574 688 aa5.87□□□□□ -1.47
CDC34YDR054C RSR1P13856 272 aa5.87□□□□□ -1.47
CDC34YDR054C PHO91P27514 894 aa5.87□□□□□ -1.47
CDC34YDR054C LOT5P34234 306 aa5.87□□□□□ -1.47
CDC34YDR054C WSC4P38739 605 aa5.87□□□□□ -1.47
CDC34YDR054C CCT6P39079 546 aa5.87□□□□□ -1.47
CDC34YDR054C GIM4P40005 111 aaKnown RBP5.87□□□□□ -1.47
CDC34YDR054C TIF34P40217 347 aaKnown RBP5.87□□□□□ -1.47
CDC34YDR054C AZF1P41696 914 aa5.87□□□□□ -1.47
CDC34YDR054C NAS6P50086 228 aa5.87□□□□□ -1.47
CDC34YDR054C MDM34P53083 459 aa5.87□□□□□ -1.47
CDC34YDR054C MPS2P53159 387 aa5.87□□□□□ -1.47
CDC34YDR054C YNL260CP53846 198 aa5.87□□□□□ -1.47
CDC34YDR054C MPS1P54199 764 aa5.87□□□□□ -1.47
CDC34YDR054C MET31Q03081 177 aa5.87□□□□□ -1.47
CDC34YDR054C CTK1Q03957 528 aaKnown RBP5.87□□□□□ -1.47
CDC34YDR054C YDR444WQ04093 687 aa5.87□□□□□ -1.47
CDC34YDR054C RAD33Q04231 177 aa5.87□□□□□ -1.47
CDC34YDR054C YDR124WQ04608 324 aa5.87□□□□□ -1.47
CDC34YDR054C OPT2Q06593 877 aa5.87□□□□□ -1.47
CDC34YDR054C YLR413WQ06689 675 aa5.87□□□□□ -1.47
CDC34YDR054C GRS2Q06817 618 aa5.87□□□□□ -1.47
CDC34YDR054C LUC7Q07508 261 aaPredicted RBP5.87□□□□□ -1.47
CDC34YDR054C PFA4Q12006 378 aa5.87□□□□□ -1.47
CDC34YDR054C RRP42Q12277 265 aaPredicted RBP5.87□□□□□ -1.47
CDC34YDR054C ERG27Q12452 347 aaKnown RBP5.87□□□□□ -1.47
CDC34YDR054C ATP6P00854 259 aa5.86□□□□□ -1.47
CDC34YDR054C LEU4P06208 619 aaKnown RBP5.86□□□□□ -1.47
CDC34YDR054C POL30P15873 258 aaKnown RBP5.86□□□□□ -1.47
CDC34YDR054C SGV1P23293 657 aaKnown RBP5.86□□□□□ -1.47
CDC34YDR054C DAL80P26343 269 aa5.86□□□□□ -1.47
CDC34YDR054C MGM101P32787 269 aaKnown RBP5.86□□□□□ -1.47
CDC34YDR054C FRE2P36033 711 aa5.86□□□□□ -1.47
CDC34YDR054C APT2P36973 181 aa5.86□□□□□ -1.47
CDC34YDR054C CDS1P38221 457 aa5.86□□□□□ -1.47
CDC34YDR054C BMT2P38278 337 aa5.86□□□□□ -1.47
CDC34YDR054C TDP1P38319 544 aa5.86□□□□□ -1.47
CDC34YDR054C DED81P38707 554 aaKnown RBP5.86□□□□□ -1.47
CDC34YDR054C RRP3P38712 501 aaKnown RBP5.86□□□□□ -1.47
CDC34YDR054C MTG2P38860 518 aa5.86□□□□□ -1.47
CDC34YDR054C PFS1P38872 237 aa5.86□□□□□ -1.47
CDC34YDR054C BAT1P38891 393 aaKnown RBP5.86□□□□□ -1.47
CDC34YDR054C PZF1P39933 429 aa5.86□□□□□ -1.47
CDC34YDR054C YEL057CP39983 233 aa5.86□□□□□ -1.47
CDC34YDR054C GID8P40208 455 aa5.86□□□□□ -1.47
CDC34YDR054C MPS3P47069 682 aa5.86□□□□□ -1.47
CDC34YDR054C NOP9P47077 666 aaKnown RBP5.86□□□□□ -1.47
CDC34YDR054C GTO1P48239 356 aa5.86□□□□□ -1.47
CDC34YDR054C MNN10P50108 393 aaKnown RBP5.86□□□□□ -1.47
CDC34YDR054C COS12P53053 380 aa5.86□□□□□ -1.47
CDC34YDR054C YGR012WP53206 393 aa5.86□□□□□ -1.47
CDC34YDR054C YGR066CP53242 292 aa5.86□□□□□ -1.47
CDC34YDR054C YPL108WQ02872 168 aaPredicted RBP5.86□□□□□ -1.47
CDC34YDR054C YMR034CQ05131 434 aaPredicted RBP5.86□□□□□ -1.47
CDC34YDR054C ATG26Q06321 1198 aa5.86□□□□□ -1.47
CDC34YDR054C FMP45Q07651 309 aa5.86□□□□□ -1.47
CDC34YDR054C PLB3Q08108 686 aa5.86□□□□□ -1.47
CDC34YDR054C YOL159CQ08300 171 aa5.86□□□□□ -1.47
CDC34YDR054C GPN2Q08726 347 aaPredicted RBP5.86□□□□□ -1.47
CDC34YDR054C UAF30Q08747 228 aa5.86□□□□□ -1.47
CDC34YDR054C GPR1Q12361 961 aa5.86□□□□□ -1.47
CDC34YDR054C YCL012CQ8J0M4 134 aa5.86□□□□□ -1.47
CDC34YDR054C HRP1Q99383 534 aaKnown RBP5.86□□□□□ -1.47
CDC34YDR054C YPR117WQ06116 2489 aa5.86□□□□□ -1.47
CDC34YDR054C TPK2P06245 380 aa5.85□□□□□ -1.47
CDC34YDR054C HOM2P13663 365 aaKnown RBP5.85□□□□□ -1.47
CDC34YDR054C PRP28P23394 588 aa5.85□□□□□ -1.47
CDC34YDR054C ERG8P24521 451 aa5.85□□□□□ -1.47
CDC34YDR054C GBP2P25555 427 aaKnown RBP RIP-Chip data5.85□□□□□ -1.47not detected
CDC34YDR054C CSM1P25651 190 aa5.85□□□□□ -1.47
CDC34YDR054C DPH5P32469 300 aaPredicted RBP5.85□□□□□ -1.47
CDC34YDR054C MTC7P32633 139 aa5.85□□□□□ -1.47
CDC34YDR054C ATO2P32907 282 aa5.85□□□□□ -1.47
CDC34YDR054C SRX1P36077 127 aa5.85□□□□□ -1.47
CDC34YDR054C PDX3P38075 228 aaKnown RBP5.85□□□□□ -1.47
Retrieved 100 of 5,963 RNA–protein pairs in 14.9 ms