RNA–Protein interactions for RNA: YDL165W

CDC36, Transcript of Component of the CCR4-NOT core complex, yeastyeast

Gene CDC36, Length 576 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC36YDL165W TAF12Q03761 539 aa1.3□□□□□ -2.2
CDC36YDL165W RPN9Q04062 393 aaKnown RBP1.3□□□□□ -2.2
CDC36YDL165W EMI2Q04409 500 aaKnown RBP1.3□□□□□ -2.2
CDC36YDL165W SPO77Q06134 477 aa1.3□□□□□ -2.2
CDC36YDL165W SKG3Q06315 1026 aa1.3□□□□□ -2.2
CDC36YDL165W DXO1Q06349 442 aa1.3□□□□□ -2.2
CDC36YDL165W VAC14Q06708 880 aa1.3□□□□□ -2.2
CDC36YDL165W YPR091CQ06833 770 aa1.3□□□□□ -2.2
CDC36YDL165W SMC5Q08204 1093 aa1.3□□□□□ -2.2
CDC36YDL165W UIP4Q08926 304 aa1.3□□□□□ -2.2
CDC36YDL165W KEL3Q08979 651 aaPredicted RBP1.3□□□□□ -2.2
CDC36YDL165W AEP3Q12089 606 aa1.3□□□□□ -2.2
CDC36YDL165W ATG29Q12092 213 aa1.3□□□□□ -2.2
CDC36YDL165W MED1Q12321 566 aa1.3□□□□□ -2.2
CDC36YDL165W SNU23Q12368 194 aaPredicted RBP1.3□□□□□ -2.2
CDC36YDL165W HMS1Q12398 434 aa1.3□□□□□ -2.2
CDC36YDL165W ERG27Q12452 347 aaKnown RBP1.3□□□□□ -2.2
CDC36YDL165W YCL001W-BQ96VH2 84 aa1.3□□□□□ -2.2
CDC36YDL165W TRM3Q07527 1436 aa1.3□□□□□ -2.2
CDC36YDL165W YBR085C-AO43137 85 aa1.29□□□□□ -2.2
CDC36YDL165W IPP1P00817 287 aaKnown RBP1.29□□□□□ -2.2
CDC36YDL165W STE3P06783 470 aa1.29□□□□□ -2.2
CDC36YDL165W CMD1P06787 147 aaKnown RBP1.29□□□□□ -2.2
CDC36YDL165W DSF1P0CX08 502 aa1.29□□□□□ -2.2
CDC36YDL165W YNR073CP0CX09 502 aa1.29□□□□□ -2.2
CDC36YDL165W MATALPHA2P0CY08 210 aa1.29□□□□□ -2.2
CDC36YDL165W HMLALPHA2P0CY09 210 aa1.29□□□□□ -2.2
CDC36YDL165W MRP7P12687 371 aa1.29□□□□□ -2.2
CDC36YDL165W YAK1P14680 807 aa1.29□□□□□ -2.2
CDC36YDL165W SEC63P14906 663 aa1.29□□□□□ -2.2
CDC36YDL165W POL30P15873 258 aaKnown RBP1.29□□□□□ -2.2
CDC36YDL165W YPK2P18961 677 aa1.29□□□□□ -2.2
CDC36YDL165W OSM1P21375 501 aaKnown RBP1.29□□□□□ -2.2
CDC36YDL165W YCK1P23291 538 aa1.29□□□□□ -2.2
CDC36YDL165W DPB2P24482 689 aaPredicted RBP1.29□□□□□ -2.2
CDC36YDL165W PRD1P25375 712 aa1.29□□□□□ -2.2
CDC36YDL165W CDC15P27636 974 aa1.29□□□□□ -2.2
CDC36YDL165W CHS3P29465 1165 aa1.29□□□□□ -2.2
CDC36YDL165W SYN8P31377 255 aa1.29□□□□□ -2.2
CDC36YDL165W MGM101P32787 269 aaKnown RBP1.29□□□□□ -2.2
CDC36YDL165W PPQ1P32945 549 aa1.29□□□□□ -2.2
CDC36YDL165W YUH1P35127 236 aa1.29□□□□□ -2.2
CDC36YDL165W YKR015CP36111 568 aa1.29□□□□□ -2.2
CDC36YDL165W MRPL37P36532 105 aa1.29□□□□□ -2.2
CDC36YDL165W CHK1P38147 527 aa1.29□□□□□ -2.2
CDC36YDL165W MAL33P38157 468 aa1.29□□□□□ -2.2
CDC36YDL165W SWC5P38326 303 aa1.29□□□□□ -2.2
CDC36YDL165W PCF11P39081 626 aaPredicted RBP1.29□□□□□ -2.2
CDC36YDL165W SEN34P39707 275 aa1.29□□□□□ -2.2
CDC36YDL165W AIM2P39721 246 aa1.29□□□□□ -2.2
CDC36YDL165W YMR134WP40207 237 aa1.29□□□□□ -2.2
CDC36YDL165W PDS1P40316 373 aaPredicted RBP1.29□□□□□ -2.2
CDC36YDL165W ALG5P40350 334 aa1.29□□□□□ -2.2
CDC36YDL165W HPM1P40481 377 aa1.29□□□□□ -2.2
CDC36YDL165W SHQ1P40486 507 aaPredicted RBP1.29□□□□□ -2.2
CDC36YDL165W SER33P40510 469 aa1.29□□□□□ -2.2
CDC36YDL165W SGN1P40561 250 aaKnown RBP RIP-Chip data1.29□□□□□ -2.2not detected
CDC36YDL165W PAC11P40960 533 aa1.29□□□□□ -2.2
CDC36YDL165W TFG2P41896 400 aaPredicted RBP1.29□□□□□ -2.2
CDC36YDL165W YFH7P43591 353 aa1.29□□□□□ -2.2
CDC36YDL165W SIP4P46954 829 aa1.29□□□□□ -2.2
CDC36YDL165W GLG2P47011 380 aa1.29□□□□□ -2.2
CDC36YDL165W LOH1P47055 219 aa1.29□□□□□ -2.2
CDC36YDL165W LSM8P47093 109 aaKnown RBP1.29□□□□□ -2.2
CDC36YDL165W YJR054WP47114 497 aa1.29□□□□□ -2.2
CDC36YDL165W BSC5P53755 489 aa1.29□□□□□ -2.2
CDC36YDL165W TOF1P53840 1238 aa1.29□□□□□ -2.2
CDC36YDL165W CWC27Q02770 301 aa1.29□□□□□ -2.2
CDC36YDL165W MMT1Q03218 510 aa1.29□□□□□ -2.2
CDC36YDL165W MRPS17Q03246 237 aaPredicted RBP1.29□□□□□ -2.2
CDC36YDL165W GIM5Q04493 163 aa1.29□□□□□ -2.2
CDC36YDL165W DPB4Q04603 196 aaKnown RBP1.29□□□□□ -2.2
CDC36YDL165W BNA5Q05979 453 aa1.29□□□□□ -2.2
CDC36YDL165W GMC2Q06201 188 aa1.29□□□□□ -2.2
CDC36YDL165W VTA1Q06263 330 aa1.29□□□□□ -2.2
CDC36YDL165W YDL114WQ07530 308 aa1.29□□□□□ -2.2
CDC36YDL165W NOP6Q07623 225 aaKnown RBP1.29□□□□□ -2.2
CDC36YDL165W RTT109Q07794 436 aa1.29□□□□□ -2.2
CDC36YDL165W SIL1Q08199 421 aa1.29□□□□□ -2.2
CDC36YDL165W SDH5Q08230 162 aa1.29□□□□□ -2.2
CDC36YDL165W YPL272CQ08984 517 aa1.29□□□□□ -2.2
CDC36YDL165W THP3Q12049 470 aaKnown RBP1.29□□□□□ -2.2
CDC36YDL165W VPS54Q12071 889 aa1.29□□□□□ -2.2
CDC36YDL165W SMF3Q12078 473 aaPredicted RBP1.29□□□□□ -2.2
CDC36YDL165W WTM1Q12363 437 aaKnown RBP1.29□□□□□ -2.2
CDC36YDL165W RTR2Q12378 196 aa1.29□□□□□ -2.2
CDC36YDL165W OCA6Q12454 224 aa1.29□□□□□ -2.2
CDC36YDL165W SPE4Q12455 300 aa1.29□□□□□ -2.2
CDC36YDL165W TUS1Q06412 1307 aa1.29□□□□□ -2.2
CDC36YDL165W MHP1P43638 1398 aa1.29□□□□□ -2.2
CDC36YDL165W RAV1P47104 1357 aa1.29□□□□□ -2.2
CDC36YDL165W SSN2P38931 1420 aa1.29□□□□□ -2.2
CDC36YDL165W ATP6P00854 259 aa1.28□□□□□ -2.2
CDC36YDL165W ARG81P05085 880 aa1.28□□□□□ -2.2
CDC36YDL165W KIN28P06242 306 aa1.28□□□□□ -2.2
CDC36YDL165W PUT2P07275 575 aa1.28□□□□□ -2.2
CDC36YDL165W RNR2P09938 399 aaKnown RBP1.28□□□□□ -2.2
CDC36YDL165W YGL041W-AP0C5N3 154 aa1.28□□□□□ -2.2
CDC36YDL165W FBA1P14540 359 aaKnown RBP1.28□□□□□ -2.2
CDC36YDL165W HEM15P16622 393 aa1.28□□□□□ -2.2
Retrieved 100 of 5,963 RNA–protein pairs in 28.5 ms