RNA–Protein interactions for RNA: YBL031W

SHE1, Transcript of Mitotic spindle protein, yeast

Gene SHE1, Length 1,017 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SHE1	YBL031W	YLR177W	Q06251	628 aa		4.16	□□□□□ -1.74
SHE1	YBL031W	YOR365C	Q08844	703 aa		4.16	□□□□□ -1.74
SHE1	YBL031W	CFT2	Q12102	859 aa	Predicted RBP	4.16	□□□□□ -1.74
SHE1	YBL031W	YLR112W	Q12130	139 aa		4.16	□□□□□ -1.74
SHE1	YBL031W	YLL056C	Q12177	298 aa		4.16	□□□□□ -1.74
SHE1	YBL031W	ASP3-2	P0CX77	362 aa		4.15	□□□□□ -1.75
SHE1	YBL031W	ASP3-3	P0CX78	362 aa		4.15	□□□□□ -1.75
SHE1	YBL031W	ASP3-4	P0CX79	362 aa		4.15	□□□□□ -1.75
SHE1	YBL031W	ASP3-1	P0CZ17	362 aa		4.15	□□□□□ -1.75
SHE1	YBL031W	SAM1	P10659	382 aa	Known RBP	4.15	□□□□□ -1.75
SHE1	YBL031W	ELO2	P25358	347 aa		4.15	□□□□□ -1.75
SHE1	YBL031W	MEI4	P29467	408 aa		4.15	□□□□□ -1.75
SHE1	YBL031W	EFB1	P32471	206 aa	Known RBP	4.15	□□□□□ -1.75
SHE1	YBL031W	UTR4	P32626	227 aa		4.15	□□□□□ -1.75
SHE1	YBL031W	YHR054C	P38780	354 aa		4.15	□□□□□ -1.75
SHE1	YBL031W	RTS2	P40962	232 aa		4.15	□□□□□ -1.75
SHE1	YBL031W	SAD1	P43589	448 aa		4.15	□□□□□ -1.75
SHE1	YBL031W	YJL132W	P47014	750 aa		4.15	□□□□□ -1.75
SHE1	YBL031W	MDV1	P47025	714 aa		4.15	□□□□□ -1.75
SHE1	YBL031W	AZR1	P50080	613 aa		4.15	□□□□□ -1.75
SHE1	YBL031W	ALT2	P52892	507 aa		4.15	□□□□□ -1.75
SHE1	YBL031W	MRM2	P53123	320 aa		4.15	□□□□□ -1.75
SHE1	YBL031W	PEX31	P53203	462 aa		4.15	□□□□□ -1.75
SHE1	YBL031W	YNL040W	P53960	456 aa	Predicted RBP	4.15	□□□□□ -1.75
SHE1	YBL031W	RHO4	Q00246	291 aa		4.15	□□□□□ -1.75
SHE1	YBL031W	EKI1	Q03764	534 aa		4.15	□□□□□ -1.75
SHE1	YBL031W	RSF1	Q05043	376 aa		4.15	□□□□□ -1.75
SHE1	YBL031W	BCP1	Q06338	283 aa		4.15	□□□□□ -1.75
SHE1	YBL031W	THP1	Q08231	455 aa		4.15	□□□□□ -1.75
SHE1	YBL031W	AAD15	Q08361	143 aa		4.15	□□□□□ -1.75
SHE1	YBL031W	CUE5	Q08412	411 aa	Known RBP	4.15	□□□□□ -1.75
SHE1	YBL031W	YLR053C	Q12026	108 aa		4.15	□□□□□ -1.75
SHE1	YBL031W	NCE102	Q12207	173 aa	RIP-Chip data	4.15	□□□□□ -1.75	not detected
SHE1	YBL031W	ATG34	Q12292	412 aa		4.15	□□□□□ -1.75
SHE1	YBL031W	ERP3	Q12403	225 aa		4.15	□□□□□ -1.75
SHE1	YBL031W	NOT5	Q12514	560 aa	Predicted RBP	4.15	□□□□□ -1.75
SHE1	YBL031W	COR1	P07256	457 aa		4.14	□□□□□ -1.75
SHE1	YBL031W	SSC1	P0CS90	654 aa	Known RBP	4.14	□□□□□ -1.75
SHE1	YBL031W	YCP4	P25349	247 aa	Known RBP	4.14	□□□□□ -1.75
SHE1	YBL031W	ADK2	P26364	225 aa		4.14	□□□□□ -1.75
SHE1	YBL031W	URA10	P30402	227 aa		4.14	□□□□□ -1.75
SHE1	YBL031W	ATP7	P30902	174 aa		4.14	□□□□□ -1.75
SHE1	YBL031W	TPS2	P31688	896 aa	Known RBP	4.14	□□□□□ -1.75
SHE1	YBL031W	RGT1	P32862	1170 aa		4.14	□□□□□ -1.75
SHE1	YBL031W	MRP4	P32902	394 aa		4.14	□□□□□ -1.75
SHE1	YBL031W	PHD1	P36093	366 aa		4.14	□□□□□ -1.75
SHE1	YBL031W	ETR1	P38071	380 aa		4.14	□□□□□ -1.75
SHE1	YBL031W	RFC3	P38629	340 aa		4.14	□□□□□ -1.75
SHE1	YBL031W	NDT80	P38830	627 aa		4.14	□□□□□ -1.75
SHE1	YBL031W	YIL054W	P40524	105 aa		4.14	□□□□□ -1.75
SHE1	YBL031W	YIR016W	P40572	265 aa		4.14	□□□□□ -1.75
SHE1	YBL031W	SEC27	P41811	889 aa	Known RBP	4.14	□□□□□ -1.75
SHE1	YBL031W	ATG27	P46989	271 aa		4.14	□□□□□ -1.75
SHE1	YBL031W	VPS9	P54787	451 aa		4.14	□□□□□ -1.75
SHE1	YBL031W	NUP100	Q02629	959 aa		4.14	□□□□□ -1.75
SHE1	YBL031W	MZM1	Q03429	123 aa	Predicted RBP	4.14	□□□□□ -1.75
SHE1	YBL031W	GRX8	Q05926	109 aa		4.14	□□□□□ -1.75
SHE1	YBL031W	UBX3	Q12229	455 aa		4.14	□□□□□ -1.75
SHE1	YBL031W	IES3	Q12345	250 aa		4.14	□□□□□ -1.75
SHE1	YBL031W	ISA2	Q12425	185 aa		4.14	□□□□□ -1.75
SHE1	YBL031W	OCA6	Q12454	224 aa		4.14	□□□□□ -1.75
SHE1	YBL031W	SPS4	P09937	338 aa		4.13	□□□□□ -1.75
SHE1	YBL031W	RPL3	P14126	387 aa	Known RBP	4.13	□□□□□ -1.75
SHE1	YBL031W	SEC63	P14906	663 aa		4.13	□□□□□ -1.75
SHE1	YBL031W	TYR1	P20049	452 aa		4.13	□□□□□ -1.75
SHE1	YBL031W	RRT12	P25381	491 aa		4.13	□□□□□ -1.75
SHE1	YBL031W	HXT3	P32466	567 aa	Known RBP	4.13	□□□□□ -1.75
SHE1	YBL031W	PDR3	P33200	976 aa		4.13	□□□□□ -1.75
SHE1	YBL031W	HCS1	P34243	683 aa		4.13	□□□□□ -1.75
SHE1	YBL031W	ASK1	P35734	292 aa		4.13	□□□□□ -1.75
SHE1	YBL031W	STB6	P36085	766 aa		4.13	□□□□□ -1.75
SHE1	YBL031W	BNA4	P38169	460 aa		4.13	□□□□□ -1.75
SHE1	YBL031W	BZZ1	P38822	633 aa		4.13	□□□□□ -1.75
SHE1	YBL031W	AIM18	P38884	321 aa		4.13	□□□□□ -1.75
SHE1	YBL031W	LAM5	P43560	674 aa		4.13	□□□□□ -1.75
SHE1	YBL031W	FMP33	P46998	180 aa		4.13	□□□□□ -1.75
SHE1	YBL031W	TRF5	P48561	642 aa	Known RBP	4.13	□□□□□ -1.75
SHE1	YBL031W	NUP84	P52891	726 aa		4.13	□□□□□ -1.75
SHE1	YBL031W	SLG1	P54867	378 aa		4.13	□□□□□ -1.75
SHE1	YBL031W	BET4	Q00618	327 aa		4.13	□□□□□ -1.75
SHE1	YBL031W	YPL014W	Q02606	381 aa		4.13	□□□□□ -1.75
SHE1	YBL031W	SRL4	Q03085	281 aa		4.13	□□□□□ -1.75
SHE1	YBL031W	RLI1	Q03195	608 aa	Known RBP	4.13	□□□□□ -1.75
SHE1	YBL031W	ERB1	Q04660	807 aa	Known RBP	4.13	□□□□□ -1.75
SHE1	YBL031W	YLR281C	Q05863	155 aa		4.13	□□□□□ -1.75
SHE1	YBL031W	SNX3	Q08826	162 aa	Known RBP	4.13	□□□□□ -1.75
SHE1	YBL031W	HER1	Q12276	1246 aa		4.13	□□□□□ -1.75
SHE1	YBL031W	RGS2	Q99188	309 aa		4.13	□□□□□ -1.75
SHE1	YBL031W	YPT1	P01123	206 aa	Known RBP	4.12	□□□□□ -1.75
SHE1	YBL031W	RHO2	P06781	192 aa		4.12	□□□□□ -1.75
SHE1	YBL031W	GCY1	P14065	312 aa	Known RBP RIP-Chip data	4.12	□□□□□ -1.75	not detected
SHE1	YBL031W	KSS1	P14681	368 aa		4.12	□□□□□ -1.75
SHE1	YBL031W	VPS3	P23643	1011 aa		4.12	□□□□□ -1.75
SHE1	YBL031W	SPS22	P25380	463 aa		4.12	□□□□□ -1.75
SHE1	YBL031W	SPB1	P25582	841 aa	Predicted RBP	4.12	□□□□□ -1.75
SHE1	YBL031W	RAD14	P28519	371 aa		4.12	□□□□□ -1.75
SHE1	YBL031W	TFC1	P32367	649 aa		4.12	□□□□□ -1.75
SHE1	YBL031W	GYP6	P32806	458 aa		4.12	□□□□□ -1.75
SHE1	YBL031W	YME2	P32843	850 aa		4.12	□□□□□ -1.75
SHE1	YBL031W	SPC34	P36131	295 aa		4.12	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 25.3 ms