RNA–Protein interactions for RNA: YAL043C

PTA1, Transcript of Subunit of holo-CPF, yeastyeast

Gene PTA1, Length 2,358 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PTA1YAL043C MDM32Q12171 622 aa3.88□□□□□ -1.79
PTA1YAL043C HMG2P12684 1045 aa3.88□□□□□ -1.79
PTA1YAL043C GLK1P17709 500 aaKnown RBP3.88□□□□□ -1.79
PTA1YAL043C PRP2P20095 876 aaPredicted RBP3.88□□□□□ -1.79
PTA1YAL043C SIR1P21691 654 aa3.88□□□□□ -1.79
PTA1YAL043C GIT1P25346 518 aa3.88□□□□□ -1.79
PTA1YAL043C SYP1P25623 870 aaKnown RBP3.88□□□□□ -1.79
PTA1YAL043C HXT4P32467 576 aa3.88□□□□□ -1.79
PTA1YAL043C PET309P32522 965 aaPredicted RBP3.88□□□□□ -1.79
PTA1YAL043C MRPL6P32904 214 aa3.88□□□□□ -1.79
PTA1YAL043C TIP20P33891 701 aa3.88□□□□□ -1.79
PTA1YAL043C STB6P36085 766 aa3.88□□□□□ -1.79
PTA1YAL043C TUL1P36096 758 aa3.88□□□□□ -1.79
PTA1YAL043C YCR087C-AP37263 153 aa3.88□□□□□ -1.79
PTA1YAL043C YBR137WP38276 179 aa3.88□□□□□ -1.79
PTA1YAL043C RRF1P38771 230 aa3.88□□□□□ -1.79
PTA1YAL043C MED6P38782 295 aa3.88□□□□□ -1.79
PTA1YAL043C HXT6P39003 570 aaKnown RBP3.88□□□□□ -1.79
PTA1YAL043C HXT7P39004 570 aa3.88□□□□□ -1.79
PTA1YAL043C ZRG8P40021 1076 aa3.88□□□□□ -1.79
PTA1YAL043C YKE4P40544 346 aa3.88□□□□□ -1.79
PTA1YAL043C JHD2P47156 728 aaPredicted RBP3.88□□□□□ -1.79
PTA1YAL043C TOM22P49334 152 aa3.88□□□□□ -1.79
PTA1YAL043C MPS1P54199 764 aa3.88□□□□□ -1.79
PTA1YAL043C SWF1Q04629 336 aa3.88□□□□□ -1.79
PTA1YAL043C YLR413WQ06689 675 aa3.88□□□□□ -1.79
PTA1YAL043C CRT10Q08226 957 aa3.88□□□□□ -1.79
PTA1YAL043C BUD7Q08754 746 aa3.88□□□□□ -1.79
PTA1YAL043C SMF3Q12078 473 aaPredicted RBP3.88□□□□□ -1.79
PTA1YAL043C ATG29Q12092 213 aa3.88□□□□□ -1.79
PTA1YAL043C YPL119C-AQ3E751 87 aa3.88□□□□□ -1.79
PTA1YAL043C STE3P06783 470 aa3.87□□□□□ -1.79
PTA1YAL043C MET8P15807 274 aa3.87□□□□□ -1.79
PTA1YAL043C CLB3P24870 427 aa3.87□□□□□ -1.79
PTA1YAL043C ASF2P32448 525 aaPredicted RBP3.87□□□□□ -1.79
PTA1YAL043C LIP5P32875 414 aa3.87□□□□□ -1.79
PTA1YAL043C SSN3P39073 555 aa3.87□□□□□ -1.79
PTA1YAL043C TPA1P40032 644 aaKnown RBP3.87□□□□□ -1.79
PTA1YAL043C SER33P40510 469 aa3.87□□□□□ -1.79
PTA1YAL043C TIR3P40552 269 aa3.87□□□□□ -1.79
PTA1YAL043C AGX1P43567 385 aa3.87□□□□□ -1.79
PTA1YAL043C SSY5P47002 699 aa3.87□□□□□ -1.79
PTA1YAL043C MDE1P47095 244 aa3.87□□□□□ -1.79
PTA1YAL043C SCW11P53189 542 aa3.87□□□□□ -1.79
PTA1YAL043C ERG26P53199 349 aaKnown RBP3.87□□□□□ -1.79
PTA1YAL043C YMR178WQ03219 274 aaKnown RBP3.87□□□□□ -1.79
PTA1YAL043C HAS1Q03532 505 aaKnown RBP3.87□□□□□ -1.79
PTA1YAL043C FRE5Q08908 694 aa3.87□□□□□ -1.79
PTA1YAL043C TRM8Q12009 286 aa3.87□□□□□ -1.79
PTA1YAL043C SKS1Q12505 502 aa3.87□□□□□ -1.79
PTA1YAL043C YCL012CQ8J0M4 134 aa3.87□□□□□ -1.79
PTA1YAL043C RIB3Q99258 208 aa3.87□□□□□ -1.79
PTA1YAL043C RPP2BP02400 110 aaKnown RBP3.87□□□□□ -1.79
PTA1YAL043C HIS3P06633 220 aa3.87□□□□□ -1.79
PTA1YAL043C RAD52P06778 471 aaKnown RBP3.87□□□□□ -1.79
PTA1YAL043C HTS1P07263 546 aaKnown RBP3.87□□□□□ -1.79
PTA1YAL043C PET122P10355 254 aa3.87□□□□□ -1.79
PTA1YAL043C BUD5P25300 642 aaPredicted RBP3.87□□□□□ -1.79
PTA1YAL043C PRP19P32523 503 aaKnown RBP3.87□□□□□ -1.79
PTA1YAL043C KAP122P32767 1081 aa3.87□□□□□ -1.79
PTA1YAL043C SSO1P32867 290 aa3.87□□□□□ -1.79
PTA1YAL043C MSN2P33748 704 aa3.87□□□□□ -1.79
PTA1YAL043C ZRT3P34240 503 aa3.87□□□□□ -1.79
PTA1YAL043C RMA1P36001 430 aaKnown RBP3.87□□□□□ -1.79
PTA1YAL043C TEF4P36008 412 aaKnown RBP3.87□□□□□ -1.79
PTA1YAL043C JEN1P36035 616 aa3.87□□□□□ -1.79
PTA1YAL043C EMC3P36039 253 aa3.87□□□□□ -1.79
PTA1YAL043C RIB1P38066 345 aa3.87□□□□□ -1.79
PTA1YAL043C HMT1P38074 348 aa3.87□□□□□ -1.79
PTA1YAL043C BAP2P38084 609 aa3.87□□□□□ -1.79
PTA1YAL043C ZTA1P38230 334 aaKnown RBP3.87□□□□□ -1.79
PTA1YAL043C RTC2P38279 296 aa3.87□□□□□ -1.79
PTA1YAL043C YHR035WP38769 630 aa3.87□□□□□ -1.79
PTA1YAL043C CEM1P39525 442 aa3.87□□□□□ -1.79
PTA1YAL043C RRG9P40156 214 aa3.87□□□□□ -1.79
PTA1YAL043C PHB1P40961 287 aa3.87□□□□□ -1.79
PTA1YAL043C PFA3P42836 336 aa3.87□□□□□ -1.79
PTA1YAL043C RET2P43621 546 aa3.87□□□□□ -1.79
PTA1YAL043C SSN8P47821 323 aa3.87□□□□□ -1.79
PTA1YAL043C GCV1P48015 400 aa3.87□□□□□ -1.79
PTA1YAL043C IRC15Q02733 499 aa3.87□□□□□ -1.79
PTA1YAL043C ISU1Q03020 165 aa3.87□□□□□ -1.79
PTA1YAL043C RTN1Q04947 295 aaKnown RBP3.87□□□□□ -1.79
PTA1YAL043C PLB3Q08108 686 aa3.87□□□□□ -1.79
PTA1YAL043C HTZ1Q12692 134 aaKnown RBP3.87□□□□□ -1.79
PTA1YAL043C KIN28P06242 306 aa3.86□□□□□ -1.79
PTA1YAL043C CPA1P07258 411 aaKnown RBP3.86□□□□□ -1.79
PTA1YAL043C DSF1P0CX08 502 aa3.86□□□□□ -1.79
PTA1YAL043C YNR073CP0CX09 502 aa3.86□□□□□ -1.79
PTA1YAL043C RPS18AP0CX55 146 aaKnown RBP3.86□□□□□ -1.79
PTA1YAL043C RPS18BP0CX56 146 aaPredicted RBP3.86□□□□□ -1.79
PTA1YAL043C FUS1P11710 512 aa3.86□□□□□ -1.79
PTA1YAL043C GAL3P13045 520 aa3.86□□□□□ -1.79
PTA1YAL043C KGD1P20967 1014 aaKnown RBP3.86□□□□□ -1.79
PTA1YAL043C NAR1P23503 491 aaKnown RBP3.86□□□□□ -1.79
PTA1YAL043C PPH22P23595 377 aa3.86□□□□□ -1.79
PTA1YAL043C YIM1P28625 365 aa3.86□□□□□ -1.79
PTA1YAL043C SOL2P37262 315 aa3.86□□□□□ -1.79
PTA1YAL043C TSL1P38427 1098 aaKnown RBP3.86□□□□□ -1.79
PTA1YAL043C CTF8P38877 133 aa3.86□□□□□ -1.79
Retrieved 100 of 5,963 RNA–protein pairs in 30.1 ms