RNA–Protein interactions for RNA: ENST00000546298.5

YBX3-218, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-218ENST00000546298 TRPC6Q9Y210 931 aa10.66□□□□□ -0.7
YBX3-218ENST00000546298 CYP46A1Q9Y6A2 500 aa10.66□□□□□ -0.7
YBX3-218ENST00000546298 MTCH2Q9Y6C9 303 aa10.66□□□□□ -0.7
YBX3-218ENST00000546298 LINC01553A4QN01 128 aa10.65□□□□□ -0.7
YBX3-218ENST00000546298 M0QZ92 97 aa10.65□□□□□ -0.7
YBX3-218ENST00000546298 RFXAPO00287 272 aa10.65□□□□□ -0.7
YBX3-218ENST00000546298 CPLX1O14810 134 aa10.65□□□□□ -0.7
YBX3-218ENST00000546298 BACH1O14867 736 aa10.65□□□□□ -0.7
YBX3-218ENST00000546298 ATG7O95352 703 aa10.65□□□□□ -0.7
YBX3-218ENST00000546298 INSRRP14616 1297 aa10.65□□□□□ -0.7
YBX3-218ENST00000546298 IFNAR1P17181 557 aa10.65□□□□□ -0.7
YBX3-218ENST00000546298 PDIA3P30101 505 aaKnown RBP10.65□□□□□ -0.7
YBX3-218ENST00000546298 IGBP1P78318 339 aa10.65□□□□□ -0.7
YBX3-218ENST00000546298 SETQ01105 290 aaPredicted RBP10.65□□□□□ -0.7
YBX3-218ENST00000546298 GRB10Q13322 594 aa10.65□□□□□ -0.7
YBX3-218ENST00000546298 PKN1Q16512 942 aa10.65□□□□□ -0.7
YBX3-218ENST00000546298 IER5Q5VY09 327 aa10.65□□□□□ -0.7
YBX3-218ENST00000546298 CPLX2Q6PUV4 134 aaKnown RBP10.65□□□□□ -0.7
YBX3-218ENST00000546298 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.65□□□□□ -0.75e-7■■□□□ 13
YBX3-218ENST00000546298 FAM43BQ6ZT52 329 aaPredicted RBP10.65□□□□□ -0.7
YBX3-218ENST00000546298 RUFY3Q7L099 469 aa10.65□□□□□ -0.7
YBX3-218ENST00000546298 TMCO2Q7Z6W1 182 aaPredicted RBP10.65□□□□□ -0.7
YBX3-218ENST00000546298 TRIM22Q8IYM9 498 aa10.65□□□□□ -0.7
YBX3-218ENST00000546298 ASB2Q96Q27 587 aa10.65□□□□□ -0.7
YBX3-218ENST00000546298 YME1L1Q96TA2 773 aa10.65□□□□□ -0.7
YBX3-218ENST00000546298 PCYT2Q99447 389 aa10.65□□□□□ -0.7
YBX3-218ENST00000546298 C22orf23Q9BZE7 217 aa10.65□□□□□ -0.7
YBX3-218ENST00000546298 TM6SF1Q9BZW5 370 aa10.65□□□□□ -0.7
YBX3-218ENST00000546298 ZSWIM6Q9HCJ5 1215 aa10.65□□□□□ -0.7
YBX3-218ENST00000546298 PRDM6Q9NQX0 595 aa10.65□□□□□ -0.7
YBX3-218ENST00000546298 SH3GLB2Q9NR46 395 aa10.65□□□□□ -0.7
YBX3-218ENST00000546298 NID2Q14112 1375 aa10.65□□□□□ -0.71
YBX3-218ENST00000546298 POTEB3A0JP26 581 aa10.64□□□□□ -0.71
YBX3-218ENST00000546298 LCHNA4D1U4 455 aa10.64□□□□□ -0.71
YBX3-218ENST00000546298 EPOPA6NHQ4 379 aa10.64□□□□□ -0.71
YBX3-218ENST00000546298 HBP1O60381 514 aa10.64□□□□□ -0.71
YBX3-218ENST00000546298 ARHGEF15O94989 841 aa10.64□□□□□ -0.71
YBX3-218ENST00000546298 CHRNA1P02708 482 aa10.64□□□□□ -0.71
YBX3-218ENST00000546298 MRPS6P82932 125 aaKnown RBP10.64□□□□□ -0.71
YBX3-218ENST00000546298 HTRA4P83105 476 aaPredicted RBP10.64□□□□□ -0.71
YBX3-218ENST00000546298 ITGB3BPQ13352 177 aaPredicted RBP10.64□□□□□ -0.71
YBX3-218ENST00000546298 MKRN4PQ13434 485 aaPredicted RBP10.64□□□□□ -0.71
YBX3-218ENST00000546298 PLCB4Q15147 1175 aa10.64□□□□□ -0.71
YBX3-218ENST00000546298 MARCH8Q5T0T0 291 aa10.64□□□□□ -0.71
YBX3-218ENST00000546298 ERICH6BQ5W0A0 696 aa10.64□□□□□ -0.71
YBX3-218ENST00000546298 MIS18BP1Q6P0N0 1132 aa10.64□□□□□ -0.71
YBX3-218ENST00000546298 POTEBQ6S5H4 581 aa10.64□□□□□ -0.71
YBX3-218ENST00000546298 PPP4R3CPQ6ZMV5 832 aa10.64□□□□□ -0.71
YBX3-218ENST00000546298 RUFY4Q6ZNE9 571 aa10.64□□□□□ -0.71
YBX3-218ENST00000546298 NME8Q8N427 588 aa10.64□□□□□ -0.71
YBX3-218ENST00000546298 DNAJB3Q8WWF6 145 aa10.64□□□□□ -0.71
YBX3-218ENST00000546298 PHKBQ93100 1093 aa10.64□□□□□ -0.71
YBX3-218ENST00000546298 TOP1MTQ969P6 601 aa10.64□□□□□ -0.71
YBX3-218ENST00000546298 SAMD11Q96NU1 681 aa10.64□□□□□ -0.71
YBX3-218ENST00000546298 ZNF577Q9BSK1 485 aa10.64□□□□□ -0.71
YBX3-218ENST00000546298 SLC26A6Q9BXS9 759 aa10.64□□□□□ -0.71
YBX3-218ENST00000546298 COG5Q9UP83 839 aa10.64□□□□□ -0.71
YBX3-218ENST00000546298 PCDHA2Q9Y5H9 948 aa10.64□□□□□ -0.71
YBX3-218ENST00000546298 SQORQ9Y6N5 450 aa10.64□□□□□ -0.71
YBX3-218ENST00000546298 FAM86B1E9PN63 330 aa10.63□□□□□ -0.71
YBX3-218ENST00000546298 DDX39AO00148 427 aaKnown RBP10.63□□□□□ -0.71
YBX3-218ENST00000546298 IPO5O00410 1097 aaKnown RBP10.63□□□□□ -0.71
YBX3-218ENST00000546298 EIF5BO60841 1220 aaKnown RBP10.63□□□□□ -0.71
YBX3-218ENST00000546298 FAM86B2P0C5J1 330 aa10.63□□□□□ -0.71
YBX3-218ENST00000546298 GHRP10912 638 aa10.63□□□□□ -0.71
YBX3-218ENST00000546298 CIITAP33076 1130 aa10.63□□□□□ -0.71
YBX3-218ENST00000546298 NLRP5P59047 1200 aa10.63□□□□□ -0.71
YBX3-218ENST00000546298 CCT2P78371 535 aaKnown RBP10.63□□□□□ -0.71
YBX3-218ENST00000546298 KRT76Q01546 638 aa10.63□□□□□ -0.71
YBX3-218ENST00000546298 SSRP1Q08945 709 aaKnown RBP10.63□□□□□ -0.71
YBX3-218ENST00000546298 NTRK3Q16288 839 aa10.63□□□□□ -0.71
YBX3-218ENST00000546298 ABHD15Q6UXT9 468 aa10.63□□□□□ -0.71
YBX3-218ENST00000546298 FAM177A1Q8N128 213 aaPredicted RBP10.63□□□□□ -0.71
YBX3-218ENST00000546298 FBXO22Q8NEZ5 403 aa10.63□□□□□ -0.71
YBX3-218ENST00000546298 SP7Q8TDD2 431 aaPredicted RBP10.63□□□□□ -0.71
YBX3-218ENST00000546298 ATP8B4Q8TF62 1192 aa10.63□□□□□ -0.71
YBX3-218ENST00000546298 CRYGNQ8WXF5 182 aa10.63□□□□□ -0.71
YBX3-218ENST00000546298 ZNF274Q96GC6 653 aaPredicted RBP10.63□□□□□ -0.71
YBX3-218ENST00000546298 FAM49AQ9H0Q0 323 aaPredicted RBP10.63□□□□□ -0.71
YBX3-218ENST00000546298 SUGCTQ9HAC7 445 aa10.63□□□□□ -0.71
YBX3-218ENST00000546298 ZNF302Q9NR11 478 aa10.63□□□□□ -0.71
YBX3-218ENST00000546298 PPP4R2Q9NY27 417 aa10.63□□□□□ -0.71
YBX3-218ENST00000546298 TRPV2Q9Y5S1 764 aa10.63□□□□□ -0.71
YBX3-218ENST00000546298 CDY2AQ9Y6F7 541 aa10.63□□□□□ -0.71
YBX3-218ENST00000546298 LAMA3Q16787 3333 aa10.63□□□□□ -0.71
YBX3-218ENST00000546298 MYH6P13533 1939 aa10.62□□□□□ -0.71
YBX3-218ENST00000546298 KIAA1217Q5T5P2 1943 aa10.62□□□□□ -0.71
YBX3-218ENST00000546298 IGLV3-22A0A075B6J6 115 aa10.62□□□□□ -0.71
YBX3-218ENST00000546298 IGKV6D-21A0A0A0MT36 114 aa10.62□□□□□ -0.71
YBX3-218ENST00000546298 SMIM35A0A1B0GVV1 85 aa10.62□□□□□ -0.71
YBX3-218ENST00000546298 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.62□□□□□ -0.71
YBX3-218ENST00000546298 DHX15O43143 795 aaKnown RBP10.62□□□□□ -0.71
YBX3-218ENST00000546298 LPXNO60711 386 aa10.62□□□□□ -0.71
YBX3-218ENST00000546298 UPP2O95045 317 aa10.62□□□□□ -0.71
YBX3-218ENST00000546298 DEXIO95424 95 aa10.62□□□□□ -0.71
YBX3-218ENST00000546298 CCNE2O96020 404 aa10.62□□□□□ -0.71
YBX3-218ENST00000546298 PSAPP07602 524 aa10.62□□□□□ -0.71
YBX3-218ENST00000546298 USP11P51784 963 aa10.62□□□□□ -0.71
YBX3-218ENST00000546298 MGAT3Q09327 533 aa10.62□□□□□ -0.71
YBX3-218ENST00000546298 TOB2Q14106 344 aaPredicted RBP10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms