RNA–Protein interactions for RNA: ENST00000498808.5

HDAC6-236, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-236ENST00000498808 ANKRD45Q5TZF3 282 aa18.08■□□□□ 0.48
HDAC6-236ENST00000498808 TSHZ1Q6ZSZ6 1077 aa18.08■□□□□ 0.48
HDAC6-236ENST00000498808 RTN4RL1Q86UN2 441 aaPredicted RBP18.08■□□□□ 0.48
HDAC6-236ENST00000498808 HOMER1Q86YM7 354 aa18.08■□□□□ 0.48
HDAC6-236ENST00000498808 SUSD6Q92537 303 aa18.08■□□□□ 0.48
HDAC6-236ENST00000498808 RTEL1Q9NZ71 1219 aa18.08■□□□□ 0.48
HDAC6-236ENST00000498808 MAD2L2Q9UI95 211 aa18.08■□□□□ 0.48
HDAC6-236ENST00000498808 CDY2AQ9Y6F7 541 aa18.08■□□□□ 0.48
HDAC6-236ENST00000498808 H0Y858 1186 aa18.07■□□□□ 0.48
HDAC6-236ENST00000498808 FIBPO43427 364 aa18.07■□□□□ 0.48
HDAC6-236ENST00000498808 PAN2Q504Q3 1202 aaKnown RBP18.07■□□□□ 0.48
HDAC6-236ENST00000498808 VN1R2Q8NFZ6 395 aa18.07■□□□□ 0.48
HDAC6-236ENST00000498808 DNAJB3Q8WWF6 145 aa18.07■□□□□ 0.48
HDAC6-236ENST00000498808 IRF2BPLQ9H1B7 796 aa18.07■□□□□ 0.48
HDAC6-236ENST00000498808 TLR9Q9NR96 1032 aa18.07■□□□□ 0.48
HDAC6-236ENST00000498808 RIF1Q5UIP0 2472 aaKnown RBP18.07■□□□□ 0.48
HDAC6-236ENST00000498808 PALM3A6NDB9 673 aaPredicted RBP18.06■□□□□ 0.48
HDAC6-236ENST00000498808 STAM2O75886 525 aa18.06■□□□□ 0.48
HDAC6-236ENST00000498808 PDGFBP01127 241 aaPredicted RBP18.06■□□□□ 0.48
HDAC6-236ENST00000498808 ATF7P17544 494 aaPredicted RBP18.06■□□□□ 0.48
HDAC6-236ENST00000498808 CD52P31358 61 aa18.06■□□□□ 0.48
HDAC6-236ENST00000498808 GATMP50440 423 aa18.06■□□□□ 0.48
HDAC6-236ENST00000498808 PPFIA1Q13136 1202 aa18.06■□□□□ 0.48
HDAC6-236ENST00000498808 PTPN21Q16825 1174 aa18.06■□□□□ 0.48
HDAC6-236ENST00000498808 NPAS4Q8IUM7 802 aa18.06■□□□□ 0.48
HDAC6-236ENST00000498808 PIGSQ96S52 555 aa18.06■□□□□ 0.48
HDAC6-236ENST00000498808 TUBE1Q9UJT0 475 aa18.06■□□□□ 0.48
HDAC6-236ENST00000498808 FAM186AA6NE01 2351 aa18.05■□□□□ 0.48
HDAC6-236ENST00000498808 MBLAC1A4D2B0 266 aaPredicted RBP18.05■□□□□ 0.48
HDAC6-236ENST00000498808 PROB1E7EW31 1015 aa18.05■□□□□ 0.48
HDAC6-236ENST00000498808 PER2O15055 1255 aa18.05■□□□□ 0.48
HDAC6-236ENST00000498808 MFAP1P55081 439 aaKnown RBP18.05■□□□□ 0.48
HDAC6-236ENST00000498808 SEC23AQ15436 765 aa18.05■□□□□ 0.48
HDAC6-236ENST00000498808 GRIK4Q16099 956 aa18.05■□□□□ 0.48
HDAC6-236ENST00000498808 MARCH8Q5T0T0 291 aa18.05■□□□□ 0.48
HDAC6-236ENST00000498808 IFIT1BQ5T764 474 aaKnown RBP18.05■□□□□ 0.48
HDAC6-236ENST00000498808 ASCL5Q7RTU5 278 aa18.05■□□□□ 0.48
HDAC6-236ENST00000498808 RSPH3Q86UC2 560 aa18.05■□□□□ 0.48
HDAC6-236ENST00000498808 ATP8B4Q8TF62 1192 aa18.05■□□□□ 0.48
HDAC6-236ENST00000498808 SENP7Q9BQF6 1050 aa18.05■□□□□ 0.48
HDAC6-236ENST00000498808 RIOX1Q9H6W3 641 aa18.05■□□□□ 0.48
HDAC6-236ENST00000498808 TLE6Q9H808 572 aa18.05■□□□□ 0.48
HDAC6-236ENST00000498808 LOXHD1Q8IVV2 1947 aa18.04■□□□□ 0.48
HDAC6-236ENST00000498808 DMDP11532 3685 aa18.04■□□□□ 0.48
HDAC6-236ENST00000498808 TCF7P36402 384 aaPredicted RBP18.04■□□□□ 0.48
HDAC6-236ENST00000498808 MRPS6P82932 125 aaKnown RBP18.04■□□□□ 0.48
HDAC6-236ENST00000498808 ZBTB10Q96DT7 871 aa18.04■□□□□ 0.48
HDAC6-236ENST00000498808 UBAC1Q9BSL1 405 aa18.04■□□□□ 0.48
HDAC6-236ENST00000498808 ZBTB47Q9UFB7 747 aaPredicted RBP18.04■□□□□ 0.48
HDAC6-236ENST00000498808 CYTH3O43739 400 aa18.03■□□□□ 0.48
HDAC6-236ENST00000498808 PPFIA3O75145 1194 aa18.03■□□□□ 0.48
HDAC6-236ENST00000498808 SDSP20132 328 aa18.03■□□□□ 0.48
HDAC6-236ENST00000498808 MARK3P27448 753 aa18.03■□□□□ 0.48
HDAC6-236ENST00000498808 RILPL2Q969X0 211 aa18.03■□□□□ 0.48
HDAC6-236ENST00000498808 RIPOR3Q96MK2 946 aa18.03■□□□□ 0.48
HDAC6-236ENST00000498808 FTHL17Q9BXU8 183 aa18.03■□□□□ 0.48
HDAC6-236ENST00000498808 GALR2O43603 387 aaPredicted RBP18.02■□□□□ 0.48
HDAC6-236ENST00000498808 STAG3L1P0CL83 205 aa18.02■□□□□ 0.48
HDAC6-236ENST00000498808 NUBP1P53384 320 aa18.02■□□□□ 0.48
HDAC6-236ENST00000498808 TRAF1Q13077 416 aa18.02■□□□□ 0.48
HDAC6-236ENST00000498808 KRT23Q9C075 422 aa18.02■□□□□ 0.48
HDAC6-236ENST00000498808 S1PR5Q9H228 398 aa18.02■□□□□ 0.48
HDAC6-236ENST00000498808 PADI3Q9ULW8 664 aa18.02■□□□□ 0.48
HDAC6-236ENST00000498808 SQORQ9Y6N5 450 aa18.02■□□□□ 0.48
HDAC6-236ENST00000498808 PNMA6FA0A0J9YX94 578 aa18.01■□□□□ 0.47
HDAC6-236ENST00000498808 GSTTP1A0A1W2PQM5 241 aa18.01■□□□□ 0.47
HDAC6-236ENST00000498808 PRR23AA6NEV1 266 aa18.01■□□□□ 0.47
HDAC6-236ENST00000498808 ATP9AO75110 1047 aa18.01■□□□□ 0.47
HDAC6-236ENST00000498808 SCG2P13521 617 aa18.01■□□□□ 0.47
HDAC6-236ENST00000498808 GRM4Q14833 912 aa18.01■□□□□ 0.47
HDAC6-236ENST00000498808 DUSP6Q16828 381 aa18.01■□□□□ 0.47
HDAC6-236ENST00000498808 PCNX4Q63HM2 1172 aa18.01■□□□□ 0.47
HDAC6-236ENST00000498808 CYB5R4Q7L1T6 521 aa18.01■□□□□ 0.47
HDAC6-236ENST00000498808 MICAL1Q8TDZ2 1067 aa18.01■□□□□ 0.47
HDAC6-236ENST00000498808 NEK1Q96PY6 1258 aa18.01■□□□□ 0.47
HDAC6-236ENST00000498808 FAM49AQ9H0Q0 323 aaPredicted RBP18.01■□□□□ 0.47
HDAC6-236ENST00000498808 ERAP1Q9NZ08 941 aa18.01■□□□□ 0.47
HDAC6-236ENST00000498808 FNDC1Q4ZHG4 1894 aaPredicted RBP18.01■□□□□ 0.47
HDAC6-236ENST00000498808 DCHS1Q96JQ0 3298 aa18.01■□□□□ 0.47
HDAC6-236ENST00000498808 KCNA2P16389 499 aa18■□□□□ 0.47
HDAC6-236ENST00000498808 SP100P23497 879 aaPredicted RBP18■□□□□ 0.47
HDAC6-236ENST00000498808 ERVFC1P60507 584 aa18■□□□□ 0.47
HDAC6-236ENST00000498808 IGBP1P78318 339 aa18■□□□□ 0.47
HDAC6-236ENST00000498808 UBE3AQ05086 875 aa18■□□□□ 0.47
HDAC6-236ENST00000498808 KCNC3Q14003 757 aa18■□□□□ 0.47
HDAC6-236ENST00000498808 IMMTQ16891 758 aaKnown RBP18■□□□□ 0.47
HDAC6-236ENST00000498808 CDCA3Q99618 268 aaPredicted RBP18■□□□□ 0.47
HDAC6-236ENST00000498808 DSCC1Q9BVC3 393 aa18■□□□□ 0.47
HDAC6-236ENST00000498808 TMX1Q9H3N1 280 aa18■□□□□ 0.47
HDAC6-236ENST00000498808 CNNM2Q9H8M5 875 aa18■□□□□ 0.47
HDAC6-236ENST00000498808 TRPV2Q9Y5S1 764 aa18■□□□□ 0.47
HDAC6-236ENST00000498808 IGSF9BQ9UPX0 1349 aa17.99■□□□□ 0.47
HDAC6-236ENST00000498808 MYO10Q9HD67 2058 aa17.99■□□□□ 0.47
HDAC6-236ENST00000498808 NBL1P41271 181 aa17.99■□□□□ 0.47
HDAC6-236ENST00000498808 TMEM62Q0P6H9 643 aa17.99■□□□□ 0.47
HDAC6-236ENST00000498808 IER5Q5VY09 327 aa17.99■□□□□ 0.47
HDAC6-236ENST00000498808 SYCE2Q6PIF2 218 aa17.99■□□□□ 0.47
HDAC6-236ENST00000498808 USP17L6PQ6QN14 398 aa17.99■□□□□ 0.47
HDAC6-236ENST00000498808 CWC27Q6UX04 472 aaKnown RBP17.99■□□□□ 0.47
HDAC6-236ENST00000498808 TMEM184AQ6ZMB5 413 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms