RNA–Protein interactions for RNA: ENST00000461098.1

HCFC1-204, Transcript of host cell factor C1, humanhuman

TSL 5

Gene HCFC1, Length 379 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-204ENST00000461098 RTEL1Q9NZ71 1219 aa13.74□□□□□ -0.21
HCFC1-204ENST00000461098 KAT6AQ92794 2004 aa13.74□□□□□ -0.21
HCFC1-204ENST00000461098 DNAH14Q0VDD8 3507 aa13.73□□□□□ -0.21
HCFC1-204ENST00000461098 MBLAC1A4D2B0 266 aaPredicted RBP13.73□□□□□ -0.21
HCFC1-204ENST00000461098 CYTH3O43739 400 aa13.73□□□□□ -0.21
HCFC1-204ENST00000461098 SDSP20132 328 aa13.73□□□□□ -0.21
HCFC1-204ENST00000461098 TSHZ1Q6ZSZ6 1077 aa13.73□□□□□ -0.21
HCFC1-204ENST00000461098 CMTR2Q8IYT2 770 aaKnown RBP13.73□□□□□ -0.21
HCFC1-204ENST00000461098 ATP8B4Q8TF62 1192 aa13.73□□□□□ -0.21
HCFC1-204ENST00000461098 PIGSQ96S52 555 aa13.73□□□□□ -0.21
HCFC1-204ENST00000461098 ZNF215Q9UL58 517 aaPredicted RBP13.73□□□□□ -0.21
HCFC1-204ENST00000461098 BAZ2BQ9UIF8 2168 aaKnown RBP13.73□□□□□ -0.21
HCFC1-204ENST00000461098 WDR87Q6ZQQ6 2873 aa13.73□□□□□ -0.21
HCFC1-204ENST00000461098 PROB1E7EW31 1015 aa13.72□□□□□ -0.21
HCFC1-204ENST00000461098 FIBPO43427 364 aa13.72□□□□□ -0.21
HCFC1-204ENST00000461098 STAM2O75886 525 aa13.72□□□□□ -0.21
HCFC1-204ENST00000461098 PDGFBP01127 241 aaPredicted RBP13.72□□□□□ -0.21
HCFC1-204ENST00000461098 GNPTABQ3T906 1256 aa13.72□□□□□ -0.21
HCFC1-204ENST00000461098 TAF2Q6P1X5 1199 aa13.72□□□□□ -0.21
HCFC1-204ENST00000461098 DNAJB3Q8WWF6 145 aa13.72□□□□□ -0.21
HCFC1-204ENST00000461098 ZBTB10Q96DT7 871 aa13.72□□□□□ -0.21
HCFC1-204ENST00000461098 RPGRIP1Q96KN7 1286 aa13.72□□□□□ -0.21
HCFC1-204ENST00000461098 SENP7Q9BQF6 1050 aa13.72□□□□□ -0.21
HCFC1-204ENST00000461098 CDY2AQ9Y6F7 541 aa13.72□□□□□ -0.21
HCFC1-204ENST00000461098 LOXHD1Q8IVV2 1947 aa13.71□□□□□ -0.21
HCFC1-204ENST00000461098 H0Y858 1186 aa13.71□□□□□ -0.21
HCFC1-204ENST00000461098 PER2O15055 1255 aa13.71□□□□□ -0.21
HCFC1-204ENST00000461098 ATP9AO75110 1047 aa13.71□□□□□ -0.21
HCFC1-204ENST00000461098 ATF7P17544 494 aaPredicted RBP13.71□□□□□ -0.21
HCFC1-204ENST00000461098 CD52P31358 61 aa13.71□□□□□ -0.21
HCFC1-204ENST00000461098 GATMP50440 423 aa13.71□□□□□ -0.21
HCFC1-204ENST00000461098 SP4Q02446 784 aa13.71□□□□□ -0.21
HCFC1-204ENST00000461098 KCNC3Q14003 757 aa13.71□□□□□ -0.21
HCFC1-204ENST00000461098 PTPN21Q16825 1174 aa13.71□□□□□ -0.21
HCFC1-204ENST00000461098 IFIT1BQ5T764 474 aaKnown RBP13.71□□□□□ -0.21
HCFC1-204ENST00000461098 CYB5R4Q7L1T6 521 aa13.71□□□□□ -0.21
HCFC1-204ENST00000461098 ASCL5Q7RTU5 278 aa13.71□□□□□ -0.21
HCFC1-204ENST00000461098 HOMER1Q86YM7 354 aa13.71□□□□□ -0.21
HCFC1-204ENST00000461098 NPAS4Q8IUM7 802 aa13.71□□□□□ -0.21
HCFC1-204ENST00000461098 PPP2R3CQ969Q6 453 aa13.71□□□□□ -0.21
HCFC1-204ENST00000461098 S1PR5Q9H228 398 aa13.71□□□□□ -0.21
HCFC1-204ENST00000461098 TLR9Q9NR96 1032 aa13.71□□□□□ -0.21
HCFC1-204ENST00000461098 GSTTP1A0A1W2PQM5 241 aa13.7□□□□□ -0.22
HCFC1-204ENST00000461098 TCF7P36402 384 aaPredicted RBP13.7□□□□□ -0.22
HCFC1-204ENST00000461098 MFAP1P55081 439 aaKnown RBP13.7□□□□□ -0.22
HCFC1-204ENST00000461098 FOXK2Q01167 660 aa13.7□□□□□ -0.22
HCFC1-204ENST00000461098 PPFIA1Q13136 1202 aa13.7□□□□□ -0.22
HCFC1-204ENST00000461098 GRIK4Q16099 956 aa13.7□□□□□ -0.22
HCFC1-204ENST00000461098 PAN2Q504Q3 1202 aaKnown RBP13.7□□□□□ -0.22
HCFC1-204ENST00000461098 ATOH1Q92858 354 aaPredicted RBP13.7□□□□□ -0.22
HCFC1-204ENST00000461098 RILPL2Q969X0 211 aa13.7□□□□□ -0.22
HCFC1-204ENST00000461098 TUBE1Q9UJT0 475 aa13.7□□□□□ -0.22
HCFC1-204ENST00000461098 PTPRZ1P23471 2315 aaPredicted RBP13.7□□□□□ -0.22
HCFC1-204ENST00000461098 DMXL1Q9Y485 3027 aa13.69□□□□□ -0.22
HCFC1-204ENST00000461098 PNMA6FA0A0J9YX94 578 aa13.69□□□□□ -0.22
HCFC1-204ENST00000461098 KCNA2P16389 499 aa13.69□□□□□ -0.22
HCFC1-204ENST00000461098 MARK3P27448 753 aa13.69□□□□□ -0.22
HCFC1-204ENST00000461098 ERVFC1P60507 584 aa13.69□□□□□ -0.22
HCFC1-204ENST00000461098 MRPS6P82932 125 aaKnown RBP13.69□□□□□ -0.22
HCFC1-204ENST00000461098 GRM4Q14833 912 aa13.69□□□□□ -0.22
HCFC1-204ENST00000461098 PCNX4Q63HM2 1172 aa13.69□□□□□ -0.22
HCFC1-204ENST00000461098 RSPH3Q86UC2 560 aa13.69□□□□□ -0.22
HCFC1-204ENST00000461098 RIPOR3Q96MK2 946 aa13.69□□□□□ -0.22
HCFC1-204ENST00000461098 UBAC1Q9BSL1 405 aa13.69□□□□□ -0.22
HCFC1-204ENST00000461098 DSCC1Q9BVC3 393 aa13.69□□□□□ -0.22
HCFC1-204ENST00000461098 KRT23Q9C075 422 aa13.69□□□□□ -0.22
HCFC1-204ENST00000461098 TMX1Q9H3N1 280 aa13.69□□□□□ -0.22
HCFC1-204ENST00000461098 TLE6Q9H808 572 aa13.69□□□□□ -0.22
HCFC1-204ENST00000461098 SENP2Q9HC62 589 aa13.69□□□□□ -0.22
HCFC1-204ENST00000461098 PADI3Q9ULW8 664 aa13.69□□□□□ -0.22
HCFC1-204ENST00000461098 SQORQ9Y6N5 450 aa13.69□□□□□ -0.22
HCFC1-204ENST00000461098 RIF1Q5UIP0 2472 aaKnown RBP13.68□□□□□ -0.22
HCFC1-204ENST00000461098 FNDC1Q4ZHG4 1894 aaPredicted RBP13.68□□□□□ -0.22
HCFC1-204ENST00000461098 MEIS2O14770 477 aa13.68□□□□□ -0.22
HCFC1-204ENST00000461098 FSCN2O14926 492 aa13.68□□□□□ -0.22
HCFC1-204ENST00000461098 PPFIA3O75145 1194 aa13.68□□□□□ -0.22
HCFC1-204ENST00000461098 NUBP1P53384 320 aa13.68□□□□□ -0.22
HCFC1-204ENST00000461098 DUSP6Q16828 381 aa13.68□□□□□ -0.22
HCFC1-204ENST00000461098 USP17L6PQ6QN14 398 aa13.68□□□□□ -0.22
HCFC1-204ENST00000461098 CWC27Q6UX04 472 aaKnown RBP13.68□□□□□ -0.22
HCFC1-204ENST00000461098 TMEM184AQ6ZMB5 413 aa13.68□□□□□ -0.22
HCFC1-204ENST00000461098 PCYT2Q99447 389 aa13.68□□□□□ -0.22
HCFC1-204ENST00000461098 FTHL17Q9BXU8 183 aa13.68□□□□□ -0.22
HCFC1-204ENST00000461098 IRF2BPLQ9H1B7 796 aa13.68□□□□□ -0.22
HCFC1-204ENST00000461098 IL25Q9H293 177 aa13.68□□□□□ -0.22
HCFC1-204ENST00000461098 ERAP1Q9NZ08 941 aa13.68□□□□□ -0.22
HCFC1-204ENST00000461098 IGSF9BQ9UPX0 1349 aa13.67□□□□□ -0.22
HCFC1-204ENST00000461098 GALR2O43603 387 aaPredicted RBP13.67□□□□□ -0.22
HCFC1-204ENST00000461098 SCG2P13521 617 aa13.67□□□□□ -0.22
HCFC1-204ENST00000461098 ITGB5P18084 799 aa13.67□□□□□ -0.22
HCFC1-204ENST00000461098 TROAPQ12815 778 aa13.67□□□□□ -0.22
HCFC1-204ENST00000461098 TRAF1Q13077 416 aa13.67□□□□□ -0.22
HCFC1-204ENST00000461098 IMMTQ16891 758 aaKnown RBP13.67□□□□□ -0.22
HCFC1-204ENST00000461098 SYCE2Q6PIF2 218 aa13.67□□□□□ -0.22
HCFC1-204ENST00000461098 SEPT1Q8WYJ6 367 aa13.67□□□□□ -0.22
HCFC1-204ENST00000461098 CNNM2Q9H8M5 875 aa13.67□□□□□ -0.22
HCFC1-204ENST00000461098 HCSTQ9UBK5 93 aa13.67□□□□□ -0.22
HCFC1-204ENST00000461098 FRYLO94915 3013 aa13.67□□□□□ -0.22
HCFC1-204ENST00000461098 PRR23AA6NEV1 266 aa13.66□□□□□ -0.22
HCFC1-204ENST00000461098 PIK3CDO00329 1044 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms