RNA–Protein interactions for RNA: YGR020C

VMA7, Transcript of Subunit F of the V1 peripheral membrane domain of V-ATPase, yeast

Gene VMA7, Length 357 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VMA7	YGR020C	BCH1	Q05029	724 aa		3.22	□□□□□ -1.89
VMA7	YGR020C	IRC25	Q07951	179 aa		3.22	□□□□□ -1.89
VMA7	YGR020C	AFI1	Q99222	893 aa		3.22	□□□□□ -1.89
VMA7	YGR020C	URA4	P20051	364 aa		3.21	□□□□□ -1.9
VMA7	YGR020C	BRF1	P29056	596 aa		3.21	□□□□□ -1.9
VMA7	YGR020C	RRP4	P38792	359 aa	Known RBP	3.21	□□□□□ -1.9
VMA7	YGR020C	JLP2	P40206	208 aa		3.21	□□□□□ -1.9
VMA7	YGR020C	SFH5	P47008	294 aa		3.21	□□□□□ -1.9
VMA7	YGR020C	BNI5	P53890	448 aa	Known RBP	3.21	□□□□□ -1.9
VMA7	YGR020C	SRL2	Q12020	392 aa		3.21	□□□□□ -1.9
VMA7	YGR020C	BUG1	Q12191	341 aa		3.21	□□□□□ -1.9
VMA7	YGR020C	TY1B-A	O13527	1196 aa	Known RBP	3.2	□□□□□ -1.9
VMA7	YGR020C	PRS1	P32895	427 aa	Known RBP	3.2	□□□□□ -1.9
VMA7	YGR020C	YMR130W	Q04223	302 aa		3.2	□□□□□ -1.9
VMA7	YGR020C	DCS1	Q06151	350 aa		3.2	□□□□□ -1.9
VMA7	YGR020C	ADK2	P26364	225 aa		3.19	□□□□□ -1.9
VMA7	YGR020C	TFB1	P32776	642 aa		3.19	□□□□□ -1.9
VMA7	YGR020C	CSE2	P33308	149 aa		3.19	□□□□□ -1.9
VMA7	YGR020C	YHR131C	P38835	850 aa		3.19	□□□□□ -1.9
VMA7	YGR020C	MDE1	P47095	244 aa		3.19	□□□□□ -1.9
VMA7	YGR020C	BRO1	P48582	844 aa		3.19	□□□□□ -1.9
VMA7	YGR020C	ACL4	Q03771	387 aa		3.19	□□□□□ -1.9
VMA7	YGR020C	SPC19	Q03954	165 aa		3.19	□□□□□ -1.9
VMA7	YGR020C	ATG34	Q12292	412 aa		3.19	□□□□□ -1.9
VMA7	YGR020C	SOD1	P00445	154 aa	Known RBP	3.18	□□□□□ -1.9
VMA7	YGR020C	HOM3	P10869	527 aa		3.18	□□□□□ -1.9
VMA7	YGR020C	NAM2	P11325	894 aa		3.18	□□□□□ -1.9
VMA7	YGR020C	YBR056W	P38081	501 aa		3.18	□□□□□ -1.9
VMA7	YGR020C	MTQ1	P53944	314 aa		3.18	□□□□□ -1.9
VMA7	YGR020C	OCA2	P53949	197 aa		3.18	□□□□□ -1.9
VMA7	YGR020C	HAL1	Q01766	294 aa		3.18	□□□□□ -1.9
VMA7	YGR020C	NUP116	Q02630	1113 aa		3.18	□□□□□ -1.9
VMA7	YGR020C	TPT1	Q12272	230 aa	Known RBP	3.18	□□□□□ -1.9
VMA7	YGR020C	NAT1	P12945	854 aa	Known RBP	3.17	□□□□□ -1.9
VMA7	YGR020C	PCL1	P24867	279 aa		3.17	□□□□□ -1.9
VMA7	YGR020C	URA7	P28274	579 aa	Known RBP	3.17	□□□□□ -1.9
VMA7	YGR020C	CHK1	P38147	527 aa		3.17	□□□□□ -1.9
VMA7	YGR020C	YIL029C	P40538	142 aa		3.17	□□□□□ -1.9
VMA7	YGR020C	YJR085C	P47131	105 aa	Known RBP	3.17	□□□□□ -1.9
VMA7	YGR020C	RPT4	P53549	437 aa	Known RBP	3.17	□□□□□ -1.9
VMA7	YGR020C	HOT1	Q03213	719 aa		3.17	□□□□□ -1.9
VMA7	YGR020C	URH1	Q04179	340 aa		3.17	□□□□□ -1.9
VMA7	YGR020C	MMR1	Q06324	491 aa		3.17	□□□□□ -1.9
VMA7	YGR020C	NDE2	Q07500	545 aa		3.17	□□□□□ -1.9
VMA7	YGR020C	MED2	Q12124	431 aa		3.17	□□□□□ -1.9
VMA7	YGR020C	SNU66	Q12420	587 aa	Predicted RBP	3.17	□□□□□ -1.9
VMA7	YGR020C	ADE4	P04046	510 aa	Known RBP	3.16	□□□□□ -1.9
VMA7	YGR020C	PDX1	P16451	410 aa		3.16	□□□□□ -1.9
VMA7	YGR020C	YCL068C	P25593	260 aa		3.16	□□□□□ -1.9
VMA7	YGR020C	ERV1	P27882	189 aa		3.16	□□□□□ -1.9
VMA7	YGR020C	NIP1	P32497	812 aa	Known RBP	3.16	□□□□□ -1.9
VMA7	YGR020C	RRP1	P35178	278 aa	Predicted RBP	3.16	□□□□□ -1.9
VMA7	YGR020C	UTH1	P36135	365 aa		3.16	□□□□□ -1.9
VMA7	YGR020C	AIM10	P39965	576 aa	Known RBP	3.16	□□□□□ -1.9
VMA7	YGR020C	CAK1	P43568	368 aa	Predicted RBP	3.16	□□□□□ -1.9
VMA7	YGR020C	ADA2	Q02336	434 aa		3.16	□□□□□ -1.9
VMA7	YGR020C	CCE1	Q03702	353 aa		3.16	□□□□□ -1.9
VMA7	YGR020C	YDR131C	Q03899	556 aa		3.16	□□□□□ -1.9
VMA7	YGR020C	CUE5	Q08412	411 aa	Known RBP	3.16	□□□□□ -1.9
VMA7	YGR020C	RAX1	Q08760	435 aa		3.16	□□□□□ -1.9
VMA7	YGR020C	IZH2	Q12442	317 aa		3.16	□□□□□ -1.9
VMA7	YGR020C	IMA3	P0CW40	589 aa		3.15	□□□□□ -1.91
VMA7	YGR020C	IMA4	P0CW41	589 aa		3.15	□□□□□ -1.91
VMA7	YGR020C	RPC53	P25441	422 aa		3.15	□□□□□ -1.91
VMA7	YGR020C	NUP2	P32499	720 aa		3.15	□□□□□ -1.91
VMA7	YGR020C	SLM4	P38247	162 aa		3.15	□□□□□ -1.91
VMA7	YGR020C	SBE22	P38814	852 aa		3.15	□□□□□ -1.91
VMA7	YGR020C	UTP18	P40362	594 aa	Predicted RBP	3.15	□□□□□ -1.91
VMA7	YGR020C	GAB1	P41733	394 aa		3.15	□□□□□ -1.91
VMA7	YGR020C	ERB1	Q04660	807 aa	Known RBP	3.15	□□□□□ -1.91
VMA7	YGR020C	SNT309	Q06091	175 aa	Predicted RBP	3.15	□□□□□ -1.91
VMA7	YGR020C	RRP9	Q06506	573 aa	Known RBP	3.15	□□□□□ -1.91
VMA7	YGR020C	IMA2	Q08295	589 aa		3.15	□□□□□ -1.91
VMA7	YGR020C	PLP2	Q12017	286 aa		3.15	□□□□□ -1.91
VMA7	YGR020C	VPS54	Q12071	889 aa		3.15	□□□□□ -1.91
VMA7	YGR020C	MTR10	Q99189	972 aa		3.15	□□□□□ -1.91
VMA7	YGR020C	COX3	P00420	269 aa		3.14	□□□□□ -1.91
VMA7	YGR020C	CLB1	P24868	471 aa		3.14	□□□□□ -1.91
VMA7	YGR020C	ATP3	P38077	311 aa	Known RBP	3.14	□□□□□ -1.91
VMA7	YGR020C	COX14	P39103	70 aa		3.14	□□□□□ -1.91
VMA7	YGR020C	STD1	Q02794	444 aa		3.14	□□□□□ -1.91
VMA7	YGR020C	TSA2	Q04120	196 aa		3.14	□□□□□ -1.91
VMA7	YGR020C	AHC1	Q12433	566 aa		3.14	□□□□□ -1.91
VMA7	YGR020C	YPS6	P40583	537 aa		3.13	□□□□□ -1.91
VMA7	YGR020C	MRM2	P53123	320 aa		3.13	□□□□□ -1.91
VMA7	YGR020C	MMT1	Q03218	510 aa		3.13	□□□□□ -1.91
VMA7	YGR020C	JID1	Q12350	301 aa		3.13	□□□□□ -1.91
VMA7	YGR020C	MSI1	P13712	422 aa		3.12	□□□□□ -1.91
VMA7	YGR020C	HSP26	P15992	214 aa	Known RBP RIP-Chip data	3.12	□□□□□ -1.91	not detected
VMA7	YGR020C	PHA2	P32452	334 aa		3.12	□□□□□ -1.91
VMA7	YGR020C	MIG3	P39943	394 aa		3.12	□□□□□ -1.91
VMA7	YGR020C	GAT2	P40209	560 aa		3.12	□□□□□ -1.91
VMA7	YGR020C	VHS2	P40463	436 aa		3.12	□□□□□ -1.91
VMA7	YGR020C	TOM22	P49334	152 aa		3.12	□□□□□ -1.91
VMA7	YGR020C	RMT2	Q03305	412 aa		3.12	□□□□□ -1.91
VMA7	YGR020C	RPN9	Q04062	393 aa	Known RBP	3.12	□□□□□ -1.91
VMA7	YGR020C	MDM36	Q06820	579 aa		3.12	□□□□□ -1.91
VMA7	YGR020C	NCA2	Q12374	616 aa		3.12	□□□□□ -1.91
VMA7	YGR020C	ARO3	P14843	370 aa	Known RBP	3.11	□□□□□ -1.91
VMA7	YGR020C	CPR2	P23285	205 aa		3.11	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 22.8 ms