RNA–Protein interactions for RNA: YFR001W

LOC1, Nuclear protein involved in asymmetric localization of ASH1 mRNA, yeastyeast

Gene LOC1, Length 615 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LOC1YFR001W HOT1Q03213 719 aa2.86□□□□□ -1.95
LOC1YFR001W MMR1Q06324 491 aa2.86□□□□□ -1.95
LOC1YFR001W TMC1Q08422 150 aaPredicted RBP2.86□□□□□ -1.95
LOC1YFR001W CLB1P24868 471 aa2.85□□□□□ -1.95
LOC1YFR001W NIP1P32497 812 aaKnown RBP2.85□□□□□ -1.95
LOC1YFR001W SLM4P38247 162 aa2.85□□□□□ -1.95
LOC1YFR001W JLP2P40206 208 aa2.85□□□□□ -1.95
LOC1YFR001W RHO5P53879 331 aaKnown RBP2.85□□□□□ -1.95
LOC1YFR001W OCA2P53949 197 aa2.85□□□□□ -1.95
LOC1YFR001W URH1Q04179 340 aa2.85□□□□□ -1.95
LOC1YFR001W BCH1Q05029 724 aa2.85□□□□□ -1.95
LOC1YFR001W YLR345WQ06137 509 aa2.85□□□□□ -1.95
LOC1YFR001W MHR1Q06630 226 aa2.85□□□□□ -1.95
LOC1YFR001W FDH1Q08911 376 aa2.85□□□□□ -1.95
LOC1YFR001W SRL2Q12020 392 aa2.85□□□□□ -1.95
LOC1YFR001W RBD2Q12270 262 aa2.85□□□□□ -1.95
LOC1YFR001W ATG34Q12292 412 aa2.85□□□□□ -1.95
LOC1YFR001W COX3P00420 269 aa2.84□□□□□ -1.95
LOC1YFR001W ADE4P04046 510 aaKnown RBP2.84□□□□□ -1.95
LOC1YFR001W CPR2P23285 205 aa2.84□□□□□ -1.95
LOC1YFR001W RVS161P25343 265 aaKnown RBP2.84□□□□□ -1.95
LOC1YFR001W RRT2P38332 387 aa2.84□□□□□ -1.95
LOC1YFR001W SFH5P47008 294 aa2.84□□□□□ -1.95
LOC1YFR001W TCB2P48231 1178 aa2.84□□□□□ -1.95
LOC1YFR001W TOM22P49334 152 aa2.84□□□□□ -1.95
LOC1YFR001W PEX25Q02969 394 aa2.84□□□□□ -1.95
LOC1YFR001W RMT2Q03305 412 aa2.84□□□□□ -1.95
LOC1YFR001W SNT309Q06091 175 aaPredicted RBP2.84□□□□□ -1.95
LOC1YFR001W MED2Q12124 431 aa2.84□□□□□ -1.95
LOC1YFR001W YRM1Q12340 786 aa2.84□□□□□ -1.95
LOC1YFR001W ARO3P14843 370 aaKnown RBP2.83□□□□□ -1.96
LOC1YFR001W POP5P28005 173 aa2.83□□□□□ -1.96
LOC1YFR001W SPR1P32603 445 aa2.83□□□□□ -1.96
LOC1YFR001W SER3P40054 469 aa2.83□□□□□ -1.96
LOC1YFR001W YPS6P40583 537 aa2.83□□□□□ -1.96
LOC1YFR001W ZIM17P42844 174 aa2.83□□□□□ -1.96
LOC1YFR001W YGL039WP53183 348 aaKnown RBP2.83□□□□□ -1.96
LOC1YFR001W YLR152CP54072 576 aa2.83□□□□□ -1.96
LOC1YFR001W VPS54Q12071 889 aa2.83□□□□□ -1.96
LOC1YFR001W WTM1Q12363 437 aaKnown RBP2.83□□□□□ -1.96
LOC1YFR001W MTR10Q99189 972 aa2.83□□□□□ -1.96
LOC1YFR001W IMA3P0CW40 589 aa2.82□□□□□ -1.96
LOC1YFR001W IMA4P0CW41 589 aa2.82□□□□□ -1.96
LOC1YFR001W HOM3P10869 527 aa2.82□□□□□ -1.96
LOC1YFR001W DBF4P32325 704 aa2.82□□□□□ -1.96
LOC1YFR001W HXT1P32465 570 aa2.82□□□□□ -1.96
LOC1YFR001W TIS11P47977 285 aa2.82□□□□□ -1.96
LOC1YFR001W RPN9Q04062 393 aaKnown RBP2.82□□□□□ -1.96
LOC1YFR001W YMR027WQ04371 470 aa2.82□□□□□ -1.96
LOC1YFR001W IMA2Q08295 589 aa2.82□□□□□ -1.96
LOC1YFR001W TPT1Q12272 230 aaKnown RBP2.82□□□□□ -1.96
LOC1YFR001W CSE2P33308 149 aa2.81□□□□□ -1.96
LOC1YFR001W ASC1P38011 319 aaKnown RBP2.81□□□□□ -1.96
LOC1YFR001W YBR056WP38081 501 aa2.81□□□□□ -1.96
LOC1YFR001W GAT2P40209 560 aa2.81□□□□□ -1.96
LOC1YFR001W VHS2P40463 436 aa2.81□□□□□ -1.96
LOC1YFR001W MDE1P47095 244 aa2.81□□□□□ -1.96
LOC1YFR001W BRO1P48582 844 aa2.81□□□□□ -1.96
LOC1YFR001W SHY1P53266 389 aa2.81□□□□□ -1.96
LOC1YFR001W AIM32Q04689 311 aa2.81□□□□□ -1.96
LOC1YFR001W RRP9Q06506 573 aaKnown RBP2.81□□□□□ -1.96
LOC1YFR001W IRC25Q07951 179 aa2.81□□□□□ -1.96
LOC1YFR001W SNU66Q12420 587 aaPredicted RBP2.81□□□□□ -1.96
LOC1YFR001W ISA2Q12425 185 aa2.81□□□□□ -1.96
LOC1YFR001W YCL068CP25593 260 aa2.8□□□□□ -1.96
LOC1YFR001W RRP1P35178 278 aaPredicted RBP2.8□□□□□ -1.96
LOC1YFR001W MPE1P35728 441 aaKnown RBP2.8□□□□□ -1.96
LOC1YFR001W HEL1P36113 551 aa2.8□□□□□ -1.96
LOC1YFR001W MRPL10P36520 322 aa2.8□□□□□ -1.96
LOC1YFR001W CHK1P38147 527 aa2.8□□□□□ -1.96
LOC1YFR001W DED81P38707 554 aaKnown RBP2.8□□□□□ -1.96
LOC1YFR001W SBE22P38814 852 aa2.8□□□□□ -1.96
LOC1YFR001W NUP116Q02630 1113 aa2.8□□□□□ -1.96
LOC1YFR001W STD1Q02794 444 aa2.8□□□□□ -1.96
LOC1YFR001W CCE1Q03702 353 aa2.8□□□□□ -1.96
LOC1YFR001W PRP42Q03776 544 aaKnown RBP2.8□□□□□ -1.96
LOC1YFR001W RAX1Q08760 435 aa2.8□□□□□ -1.96
LOC1YFR001W AEP3Q12089 606 aa2.8□□□□□ -1.96
LOC1YFR001W MDH1P17505 334 aaKnown RBP RIP-Chip data2.79□□□□□ -1.96not detected
LOC1YFR001W PHA2P32452 334 aa2.79□□□□□ -1.96
LOC1YFR001W ZTA1P38230 334 aaKnown RBP2.79□□□□□ -1.96
LOC1YFR001W YHR131CP38835 850 aa2.79□□□□□ -1.96
LOC1YFR001W SIM1P40472 476 aa2.79□□□□□ -1.96
LOC1YFR001W YJR085CP47131 105 aaKnown RBP2.79□□□□□ -1.96
LOC1YFR001W YGR111WP53265 400 aa2.79□□□□□ -1.96
LOC1YFR001W MTQ1P53944 314 aa2.79□□□□□ -1.96
LOC1YFR001W MMT1Q03218 510 aa2.79□□□□□ -1.96
LOC1YFR001W UAF30Q08747 228 aa2.79□□□□□ -1.96
LOC1YFR001W CYS4P32582 507 aaKnown RBP2.78□□□□□ -1.96
LOC1YFR001W ATP3P38077 311 aaKnown RBP2.78□□□□□ -1.96
LOC1YFR001W OLA1P38219 394 aaKnown RBP2.78□□□□□ -1.96
LOC1YFR001W YIL029CP40538 142 aa2.78□□□□□ -1.96
LOC1YFR001W YLR456WQ06199 204 aa2.78□□□□□ -1.96
LOC1YFR001W NDE2Q07500 545 aa2.78□□□□□ -1.96
LOC1YFR001W BSC6Q08280 497 aa2.78□□□□□ -1.96
LOC1YFR001W PLP2Q12017 286 aa2.78□□□□□ -1.96
LOC1YFR001W RUP1Q12242 671 aa2.78□□□□□ -1.96
LOC1YFR001W EXG1P23776 448 aaKnown RBP2.77□□□□□ -1.97
LOC1YFR001W RIM1P32445 135 aaKnown RBP2.77□□□□□ -1.97
LOC1YFR001W STN1P38960 494 aa2.77□□□□□ -1.97
Retrieved 100 of 5,963 RNA–protein pairs in 28.8 ms