RNA–Protein interactions for RNA: YFL008W

SMC1, Transcript of Subunit of the multiprotein cohesin complex, yeastyeast

Gene SMC1, Length 3,678 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMC1YFL008W PTR2P32901 601 aa1.08□□□□□ -2.24
SMC1YFL008W SAS3P34218 831 aa1.08□□□□□ -2.24
SMC1YFL008W SEF1P34228 1148 aa1.08□□□□□ -2.24
SMC1YFL008W VID24P38263 362 aa1.08□□□□□ -2.24
SMC1YFL008W MKT1P40850 830 aaKnown RBP1.08□□□□□ -2.24
SMC1YFL008W YJR011CP47086 261 aaPredicted RBP1.08□□□□□ -2.24
SMC1YFL008W GPI1P53306 609 aa1.08□□□□□ -2.24
SMC1YFL008W SKI7Q08491 747 aaPredicted RBP1.08□□□□□ -2.24
SMC1YFL008W RRG7Q08774 242 aaPredicted RBP1.08□□□□□ -2.24
SMC1YFL008W PKH2Q12236 1081 aaKnown RBP1.08□□□□□ -2.24
SMC1YFL008W SCM3Q12334 223 aa1.08□□□□□ -2.24
SMC1YFL008W SKM1Q12469 655 aa1.08□□□□□ -2.24
SMC1YFL008W SAL1D6W196 494 aa1.08□□□□□ -2.24
SMC1YFL008W MTF1P14908 341 aaKnown RBP1.08□□□□□ -2.24
SMC1YFL008W ECM25P32525 599 aa1.08□□□□□ -2.24
SMC1YFL008W CYM1P32898 989 aa1.08□□□□□ -2.24
SMC1YFL008W TUL1P36096 758 aa1.08□□□□□ -2.24
SMC1YFL008W HEM14P40012 539 aa1.08□□□□□ -2.24
SMC1YFL008W YJL068CP40363 299 aa1.08□□□□□ -2.24
SMC1YFL008W PHO86P46956 311 aa1.08□□□□□ -2.24
SMC1YFL008W YJR085CP47131 105 aaKnown RBP1.08□□□□□ -2.24
SMC1YFL008W VID30P53076 958 aa1.08□□□□□ -2.24
SMC1YFL008W MFG1Q07684 458 aa1.08□□□□□ -2.24
SMC1YFL008W FLO11P08640 1367 aa1.08□□□□□ -2.24
SMC1YFL008W MDN1Q12019 4910 aaKnown RBP1.08□□□□□ -2.24
SMC1YFL008W GCN4P03069 281 aa1.08□□□□□ -2.24
SMC1YFL008W RPC53P25441 422 aa1.08□□□□□ -2.24
SMC1YFL008W ADK2P26364 225 aa1.08□□□□□ -2.24
SMC1YFL008W CDC15P27636 974 aa1.08□□□□□ -2.24
SMC1YFL008W TIP1P27654 210 aaPredicted RBP1.08□□□□□ -2.24
SMC1YFL008W OST1P41543 476 aaKnown RBP1.08□□□□□ -2.24
SMC1YFL008W YGR066CP53242 292 aa1.08□□□□□ -2.24
SMC1YFL008W YGR127WP53275 312 aa1.08□□□□□ -2.24
SMC1YFL008W YMR181CQ03231 154 aa1.08□□□□□ -2.24
SMC1YFL008W ASA1Q06822 443 aa1.08□□□□□ -2.24
SMC1YFL008W RCN2Q12044 265 aa1.08□□□□□ -2.24
SMC1YFL008W UBR1P19812 1950 aa1.08□□□□□ -2.24
SMC1YFL008W CPR4P25334 318 aa1.07□□□□□ -2.24
SMC1YFL008W EFB1P32471 206 aaKnown RBP1.07□□□□□ -2.24
SMC1YFL008W APE3P37302 537 aaKnown RBP1.07□□□□□ -2.24
SMC1YFL008W KTR3P38130 404 aaPredicted RBP1.07□□□□□ -2.24
SMC1YFL008W YHK8P38776 514 aa1.07□□□□□ -2.24
SMC1YFL008W UME6P39001 836 aa1.07□□□□□ -2.24
SMC1YFL008W CRZ1P53968 678 aa1.07□□□□□ -2.24
SMC1YFL008W PIR3Q03180 325 aa1.07□□□□□ -2.24
SMC1YFL008W HSP31Q04432 237 aa1.07□□□□□ -2.24
SMC1YFL008W YDR341CQ05506 607 aaKnown RBP1.07□□□□□ -2.24
SMC1YFL008W OCA4P25366 362 aa1.07□□□□□ -2.24
SMC1YFL008W KRE2P27809 442 aa1.07□□□□□ -2.24
SMC1YFL008W NDI1P32340 513 aa1.07□□□□□ -2.24
SMC1YFL008W SAD1P43589 448 aa1.07□□□□□ -2.24
SMC1YFL008W SEH1P53011 349 aaKnown RBP1.07□□□□□ -2.24
SMC1YFL008W YIP1P53039 248 aa1.07□□□□□ -2.24
SMC1YFL008W SPE3Q12074 293 aaKnown RBP1.07□□□□□ -2.24
SMC1YFL008W SMY1P32364 656 aaKnown RBP1.07□□□□□ -2.24
SMC1YFL008W GYP6P32806 458 aa1.07□□□□□ -2.24
SMC1YFL008W MRPL4P36517 319 aa1.07□□□□□ -2.24
SMC1YFL008W TCD1P38756 429 aa1.07□□□□□ -2.24
SMC1YFL008W STN1P38960 494 aa1.07□□□□□ -2.24
SMC1YFL008W PRM5P40476 318 aa1.07□□□□□ -2.24
SMC1YFL008W PMT5P52867 743 aa1.07□□□□□ -2.24
SMC1YFL008W BTN2P53286 410 aa1.07□□□□□ -2.24
SMC1YFL008W RPN9Q04062 393 aaKnown RBP1.07□□□□□ -2.24
SMC1YFL008W YOR376WQ08900 122 aa1.07□□□□□ -2.24
SMC1YFL008W TIP41Q12199 356 aa1.07□□□□□ -2.24
SMC1YFL008W SFG1Q12507 346 aa1.07□□□□□ -2.24
SMC1YFL008W CYB2P00175 591 aa1.06□□□□□ -2.24
SMC1YFL008W IMA3P0CW40 589 aa1.06□□□□□ -2.24
SMC1YFL008W IMA4P0CW41 589 aa1.06□□□□□ -2.24
SMC1YFL008W YCR100CP25606 316 aa1.06□□□□□ -2.24
SMC1YFL008W STV1P37296 890 aa1.06□□□□□ -2.24
SMC1YFL008W PET100P38958 111 aa1.06□□□□□ -2.24
SMC1YFL008W ALG8P40351 577 aa1.06□□□□□ -2.24
SMC1YFL008W HXT14P42833 540 aa1.06□□□□□ -2.24
SMC1YFL008W YGR210CP42942 411 aa1.06□□□□□ -2.24
SMC1YFL008W SUB1P54000 292 aaKnown RBP1.06□□□□□ -2.24
SMC1YFL008W MRP51Q02950 344 aa1.06□□□□□ -2.24
SMC1YFL008W COG4Q06096 861 aa1.06□□□□□ -2.24
SMC1YFL008W VPS74Q06385 345 aa1.06□□□□□ -2.24
SMC1YFL008W IMA2Q08295 589 aa1.06□□□□□ -2.24
SMC1YFL008W TRS65P32893 560 aa1.06□□□□□ -2.24
SMC1YFL008W LTV1P34078 463 aa1.06□□□□□ -2.24
SMC1YFL008W SOR1P35497 357 aaKnown RBP1.06□□□□□ -2.24
SMC1YFL008W YJL132WP47014 750 aa1.06□□□□□ -2.24
SMC1YFL008W TOF1P53840 1238 aa1.06□□□□□ -2.24
SMC1YFL008W SCS7Q03529 384 aa1.06□□□□□ -2.24
SMC1YFL008W BUD22Q04347 519 aaKnown RBP1.06□□□□□ -2.24
SMC1YFL008W MMR1Q06324 491 aa1.06□□□□□ -2.24
SMC1YFL008W YPR078CQ06813 372 aa1.06□□□□□ -2.24
SMC1YFL008W SOR2Q07786 357 aa1.06□□□□□ -2.24
SMC1YFL008W SEC53P07283 254 aaKnown RBP1.05□□□□□ -2.24
SMC1YFL008W PRS1P32895 427 aaKnown RBP1.05□□□□□ -2.24
SMC1YFL008W YBP1P38315 674 aa1.05□□□□□ -2.24
SMC1YFL008W YGR149WP48236 432 aa1.05□□□□□ -2.24
SMC1YFL008W FRE4P53746 719 aa1.05□□□□□ -2.24
SMC1YFL008W TAF12Q03761 539 aa1.05□□□□□ -2.24
SMC1YFL008W GLO2Q05584 274 aa1.05□□□□□ -2.24
SMC1YFL008W RNH203Q12338 110 aa1.05□□□□□ -2.24
SMC1YFL008W SUP35P05453 685 aaKnown RBP1.05□□□□□ -2.24
SMC1YFL008W HIR2P32480 875 aa1.05□□□□□ -2.24
Retrieved 100 of 5,963 RNA–protein pairs in 9.3 ms