RNA–Protein interactions for RNA: YDR172W

SUP35, Transcript of Translation termination factor eRF3, yeast

Gene SUP35, Length 2,058 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SUP35	YDR172W	LHS1	P36016	881 aa		4.5	□□□□□ -1.69
SUP35	YDR172W	RIB1	P38066	345 aa		4.5	□□□□□ -1.69
SUP35	YDR172W	YHR127W	P38833	243 aa	Known RBP	4.5	□□□□□ -1.69
SUP35	YDR172W	RPS14B	P39516	138 aa	Known RBP	4.5	□□□□□ -1.69
SUP35	YDR172W	MUP1	P50276	574 aa		4.5	□□□□□ -1.69
SUP35	YDR172W	BIO3	P50277	480 aa		4.5	□□□□□ -1.69
SUP35	YDR172W	NBP35	P52920	328 aa		4.5	□□□□□ -1.69
SUP35	YDR172W	RTS3	P53289	263 aa		4.5	□□□□□ -1.69
SUP35	YDR172W	RSN1	Q03516	953 aa		4.5	□□□□□ -1.69
SUP35	YDR172W	THP1	Q08231	455 aa		4.5	□□□□□ -1.69
SUP35	YDR172W	VIK1	Q12045	647 aa		4.5	□□□□□ -1.69
SUP35	YDR172W	YLR126C	Q12288	251 aa		4.5	□□□□□ -1.69
SUP35	YDR172W	IES3	Q12345	250 aa		4.5	□□□□□ -1.69
SUP35	YDR172W	GPR1	Q12361	961 aa		4.5	□□□□□ -1.69
SUP35	YDR172W	HIS5	P07172	385 aa		4.5	□□□□□ -1.69
SUP35	YDR172W	FAR1	P21268	830 aa		4.5	□□□□□ -1.69
SUP35	YDR172W	GRR1	P24814	1151 aa		4.5	□□□□□ -1.69
SUP35	YDR172W	RPS5	P26783	225 aa	Known RBP	4.5	□□□□□ -1.69
SUP35	YDR172W	RPF2	P36160	344 aa	Known RBP	4.5	□□□□□ -1.69
SUP35	YDR172W	ARA1	P38115	344 aa		4.5	□□□□□ -1.69
SUP35	YDR172W	ALG3	P38179	458 aa		4.5	□□□□□ -1.69
SUP35	YDR172W	YBR071W	P38243	211 aa		4.5	□□□□□ -1.69
SUP35	YDR172W	ECM8	P38246	354 aa		4.5	□□□□□ -1.69
SUP35	YDR172W	TAE1	P38340	232 aa		4.5	□□□□□ -1.69
SUP35	YDR172W	GDH3	P39708	457 aa		4.5	□□□□□ -1.69
SUP35	YDR172W	RSP5	P39940	809 aa	Known RBP	4.5	□□□□□ -1.69
SUP35	YDR172W	YFR020W	P43600	232 aa		4.5	□□□□□ -1.69
SUP35	YDR172W	YNL140C	P53910	189 aa		4.5	□□□□□ -1.69
SUP35	YDR172W	GRX5	Q02784	150 aa		4.5	□□□□□ -1.69
SUP35	YDR172W	TPP1	Q03796	238 aa		4.5	□□□□□ -1.69
SUP35	YDR172W	MED7	Q08278	222 aa		4.5	□□□□□ -1.69
SUP35	YDR172W	RPN8	Q08723	338 aa	Known RBP	4.5	□□□□□ -1.69
SUP35	YDR172W	YDR034W-B	Q6Q5X2	51 aa		4.5	□□□□□ -1.69
SUP35	YDR172W	MDM12	Q92328	271 aa		4.5	□□□□□ -1.69
SUP35	YDR172W	CET1	O13297	549 aa	Predicted RBP	4.49	□□□□□ -1.69
SUP35	YDR172W	CYC7	P00045	113 aa		4.49	□□□□□ -1.69
SUP35	YDR172W	TPK3	P05986	398 aa		4.49	□□□□□ -1.69
SUP35	YDR172W	MET17	P06106	444 aa		4.49	□□□□□ -1.69
SUP35	YDR172W	ALG7	P07286	448 aa		4.49	□□□□□ -1.69
SUP35	YDR172W	GCD1	P09032	578 aa	Predicted RBP	4.49	□□□□□ -1.69
SUP35	YDR172W	GAL3	P13045	520 aa		4.49	□□□□□ -1.69
SUP35	YDR172W	KSS1	P14681	368 aa		4.49	□□□□□ -1.69
SUP35	YDR172W	FPR1	P20081	114 aa	Known RBP	4.49	□□□□□ -1.69
SUP35	YDR172W	YSR3	P23501	404 aa		4.49	□□□□□ -1.69
SUP35	YDR172W	RHB1	P25378	209 aa		4.49	□□□□□ -1.69
SUP35	YDR172W	GSH1	P32477	678 aa		4.49	□□□□□ -1.69
SUP35	YDR172W	CAT2	P32796	670 aa	Known RBP	4.49	□□□□□ -1.69
SUP35	YDR172W	SEC66	P33754	206 aa		4.49	□□□□□ -1.69
SUP35	YDR172W	GLG1	P36143	616 aa		4.49	□□□□□ -1.69
SUP35	YDR172W	GOS1	P38736	223 aa		4.49	□□□□□ -1.69
SUP35	YDR172W	EGD2	P38879	174 aa	Known RBP	4.49	□□□□□ -1.69
SUP35	YDR172W	MPM1	P40364	252 aa		4.49	□□□□□ -1.69
SUP35	YDR172W	TY4A-J	P47023	414 aa		4.49	□□□□□ -1.69
SUP35	YDR172W	SGF73	P53165	657 aa		4.49	□□□□□ -1.69
SUP35	YDR172W	APC4	Q04601	652 aa		4.49	□□□□□ -1.69
SUP35	YDR172W	YMR034C	Q05131	434 aa	Predicted RBP	4.49	□□□□□ -1.69
SUP35	YDR172W	RRP45	Q05636	305 aa	Known RBP	4.49	□□□□□ -1.69
SUP35	YDR172W	MCM21	Q06675	368 aa		4.49	□□□□□ -1.69
SUP35	YDR172W	TRM8	Q12009	286 aa		4.49	□□□□□ -1.69
SUP35	YDR172W	YDL199C	Q12407	687 aa		4.49	□□□□□ -1.69
SUP35	YDR172W	RPS21A	P0C0V8	87 aa	Known RBP	4.49	□□□□□ -1.69
SUP35	YDR172W	POL30	P15873	258 aa	Known RBP	4.49	□□□□□ -1.69
SUP35	YDR172W	PHO84	P25297	587 aa	Known RBP	4.49	□□□□□ -1.69
SUP35	YDR172W	SBA1	P28707	216 aa	Known RBP	4.49	□□□□□ -1.69
SUP35	YDR172W	MRPL6	P32904	214 aa		4.49	□□□□□ -1.69
SUP35	YDR172W	GDH2	P33327	1092 aa	Known RBP	4.49	□□□□□ -1.69
SUP35	YDR172W	YHR078W	P38799	552 aa		4.49	□□□□□ -1.69
SUP35	YDR172W	COG3	P40094	801 aa		4.49	□□□□□ -1.69
SUP35	YDR172W	DAM1	P53267	343 aa		4.49	□□□□□ -1.69
SUP35	YDR172W	SNF12	P53628	566 aa		4.49	□□□□□ -1.69
SUP35	YDR172W	AQR1	P53943	586 aa		4.49	□□□□□ -1.69
SUP35	YDR172W	GIP3	Q03016	1276 aa		4.49	□□□□□ -1.69
SUP35	YDR172W	CLU1	Q03690	1277 aa	Known RBP	4.49	□□□□□ -1.69
SUP35	YDR172W	SSQ1	Q05931	657 aa	Predicted RBP	4.49	□□□□□ -1.69
SUP35	YDR172W	VPS74	Q06385	345 aa		4.49	□□□□□ -1.69
SUP35	YDR172W	PIN2	Q12057	282 aa		4.49	□□□□□ -1.69
SUP35	YDR172W	HAL9	Q12180	1030 aa		4.49	□□□□□ -1.69
SUP35	YDR172W	NSI1	Q12457	570 aa		4.49	□□□□□ -1.69
SUP35	YDR172W	YPR096C	O13587	100 aa		4.48	□□□□□ -1.69
SUP35	YDR172W	SYP1	P25623	870 aa	Known RBP	4.48	□□□□□ -1.69
SUP35	YDR172W	MEI5	P32489	222 aa		4.48	□□□□□ -1.69
SUP35	YDR172W	MGM101	P32787	269 aa	Known RBP	4.48	□□□□□ -1.69
SUP35	YDR172W	SPO23	P33757	523 aa		4.48	□□□□□ -1.69
SUP35	YDR172W	UTP11	P34247	250 aa	Predicted RBP	4.48	□□□□□ -1.69
SUP35	YDR172W	YPT35	P38815	214 aa	Known RBP	4.48	□□□□□ -1.69
SUP35	YDR172W	MNN9	P39107	395 aa	Known RBP	4.48	□□□□□ -1.69
SUP35	YDR172W	GIM4	P40005	111 aa	Known RBP	4.48	□□□□□ -1.69
SUP35	YDR172W	KRE29	P40026	464 aa		4.48	□□□□□ -1.69
SUP35	YDR172W	CAK1	P43568	368 aa	Predicted RBP	4.48	□□□□□ -1.69
SUP35	YDR172W	FAR7	P43592	221 aa		4.48	□□□□□ -1.69
SUP35	YDR172W	SHE4	P51534	789 aa		4.48	□□□□□ -1.69
SUP35	YDR172W	ZRG17	P53735	605 aa		4.48	□□□□□ -1.69
SUP35	YDR172W	ESF2	P53743	316 aa	Known RBP	4.48	□□□□□ -1.69
SUP35	YDR172W	YNR061C	P53747	219 aa		4.48	□□□□□ -1.69
SUP35	YDR172W	YNL181W	P53878	407 aa		4.48	□□□□□ -1.69
SUP35	YDR172W	TGL2	P54857	326 aa		4.48	□□□□□ -1.69
SUP35	YDR172W	YVH1	Q02256	364 aa	Known RBP	4.48	□□□□□ -1.69
SUP35	YDR172W	SWP1	Q02795	286 aa		4.48	□□□□□ -1.69
SUP35	YDR172W	ROT1	Q03691	256 aa		4.48	□□□□□ -1.69
SUP35	YDR172W	SWF1	Q04629	336 aa		4.48	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 7.7 ms