RNA–Protein interactions for RNA: YDL064W

UBC9, Transcript of SUMO-conjugating enzyme involved in the Smt3p conjugation pathway, yeastyeast

Gene UBC9, Length 474 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBC9YDL064W YLR108CQ12259 485 aa3.28□□□□□ -1.88
UBC9YDL064W ERV2Q12284 196 aa3.28□□□□□ -1.88
UBC9YDL064W RPL1AP0CX43 217 aaKnown RBP3.27□□□□□ -1.89
UBC9YDL064W RPL1BP0CX44 217 aaKnown RBP3.27□□□□□ -1.89
UBC9YDL064W CBS2P14905 389 aa3.27□□□□□ -1.89
UBC9YDL064W LTV1P34078 463 aa3.27□□□□□ -1.89
UBC9YDL064W KKQ8P36004 724 aa3.27□□□□□ -1.89
UBC9YDL064W NDT80P38830 627 aa3.27□□□□□ -1.89
UBC9YDL064W GAT2P40209 560 aa3.27□□□□□ -1.89
UBC9YDL064W MTM1P53320 366 aa3.27□□□□□ -1.89
UBC9YDL064W ELP3Q02908 557 aaKnown RBP3.27□□□□□ -1.89
UBC9YDL064W YMR181CQ03231 154 aa3.27□□□□□ -1.89
UBC9YDL064W RPN9Q04062 393 aaKnown RBP3.27□□□□□ -1.89
UBC9YDL064W SCW10Q04951 389 aa3.27□□□□□ -1.89
UBC9YDL064W TSR1Q07381 788 aaKnown RBP3.27□□□□□ -1.89
UBC9YDL064W ATG34Q12292 412 aa3.27□□□□□ -1.89
UBC9YDL064W CYC3P06182 269 aa3.26□□□□□ -1.89
UBC9YDL064W RPS8AP0CX39 200 aaKnown RBP3.26□□□□□ -1.89
UBC9YDL064W RPS8BP0CX40 200 aaKnown RBP3.26□□□□□ -1.89
UBC9YDL064W SPS22P25380 463 aa3.26□□□□□ -1.89
UBC9YDL064W PEX5P35056 612 aa3.26□□□□□ -1.89
UBC9YDL064W MTC6P38849 526 aa3.26□□□□□ -1.89
UBC9YDL064W STN1P38960 494 aa3.26□□□□□ -1.89
UBC9YDL064W PRM5P40476 318 aa3.26□□□□□ -1.89
UBC9YDL064W PIB2P53191 635 aa3.26□□□□□ -1.89
UBC9YDL064W RHO5P53879 331 aaKnown RBP3.26□□□□□ -1.89
UBC9YDL064W PRP42Q03776 544 aaKnown RBP3.26□□□□□ -1.89
UBC9YDL064W SMA2Q04658 369 aa3.26□□□□□ -1.89
UBC9YDL064W TMS1Q12116 473 aa3.26□□□□□ -1.89
UBC9YDL064W TRP1P00912 224 aa3.25□□□□□ -1.89
UBC9YDL064W ALG1P16661 449 aa3.25□□□□□ -1.89
UBC9YDL064W DEG1P31115 442 aaKnown RBP3.25□□□□□ -1.89
UBC9YDL064W YBL059WP34224 193 aa3.25□□□□□ -1.89
UBC9YDL064W PCF11P39081 626 aaPredicted RBP3.25□□□□□ -1.89
UBC9YDL064W SIM1P40472 476 aa3.25□□□□□ -1.89
UBC9YDL064W SPG5P42933 373 aa3.25□□□□□ -1.89
UBC9YDL064W YPI1P43587 155 aa3.25□□□□□ -1.89
UBC9YDL064W YJL055WP47044 245 aa3.25□□□□□ -1.89
UBC9YDL064W SPT15P13393 240 aaKnown RBP3.24□□□□□ -1.89
UBC9YDL064W DPH2P32461 534 aa3.24□□□□□ -1.89
UBC9YDL064W CYS4P32582 507 aaKnown RBP3.24□□□□□ -1.89
UBC9YDL064W MUD1P32605 298 aaKnown RBP3.24□□□□□ -1.89
UBC9YDL064W MDL1P33310 695 aa3.24□□□□□ -1.89
UBC9YDL064W GDI1P39958 451 aaKnown RBP3.24□□□□□ -1.89
UBC9YDL064W GIS2P53849 153 aaKnown RBP RIP-Chip data3.24□□□□□ -1.89not detected
UBC9YDL064W MEH1Q02205 184 aa3.24□□□□□ -1.89
UBC9YDL064W STD1Q02794 444 aa3.24□□□□□ -1.89
UBC9YDL064W RRN11Q04712 507 aa3.24□□□□□ -1.89
UBC9YDL064W YDR341CQ05506 607 aaKnown RBP3.24□□□□□ -1.89
UBC9YDL064W YBR056WP38081 501 aa3.23□□□□□ -1.89
UBC9YDL064W OLA1P38219 394 aaKnown RBP3.23□□□□□ -1.89
UBC9YDL064W PFF1P38244 976 aa3.23□□□□□ -1.89
UBC9YDL064W MSG5P38590 489 aa3.23□□□□□ -1.89
UBC9YDL064W YER079WP40052 210 aaKnown RBP3.23□□□□□ -1.89
UBC9YDL064W JLP2P40206 208 aa3.23□□□□□ -1.89
UBC9YDL064W SFH5P47008 294 aa3.23□□□□□ -1.89
UBC9YDL064W ROG1P53118 685 aa3.23□□□□□ -1.89
UBC9YDL064W VPS9P54787 451 aa3.23□□□□□ -1.89
UBC9YDL064W BCH1Q05029 724 aa3.23□□□□□ -1.89
UBC9YDL064W RRP9Q06506 573 aaKnown RBP3.23□□□□□ -1.89
UBC9YDL064W RSA1Q08932 381 aa3.23□□□□□ -1.89
UBC9YDL064W YRM1Q12340 786 aa3.23□□□□□ -1.89
UBC9YDL064W HHF1P02309 103 aaKnown RBP3.22□□□□□ -1.89
UBC9YDL064W OPI3P05375 206 aa3.22□□□□□ -1.89
UBC9YDL064W PDE2P06776 526 aa3.22□□□□□ -1.89
UBC9YDL064W CDC21P06785 304 aa3.22□□□□□ -1.89
UBC9YDL064W NFT1P0CE68 1218 aa3.22□□□□□ -1.89
UBC9YDL064W SDH3P33421 198 aa3.22□□□□□ -1.89
UBC9YDL064W SWD3P38123 315 aa3.22□□□□□ -1.89
UBC9YDL064W QDR3P38227 689 aa3.22□□□□□ -1.89
UBC9YDL064W INM1P38710 295 aa3.22□□□□□ -1.89
UBC9YDL064W PTH1P38876 190 aaKnown RBP3.22□□□□□ -1.89
UBC9YDL064W JEM1P40358 645 aa3.22□□□□□ -1.89
UBC9YDL064W ERO1Q03103 563 aa3.22□□□□□ -1.89
UBC9YDL064W CCE1Q03702 353 aa3.22□□□□□ -1.89
UBC9YDL064W SXM1Q04175 944 aaKnown RBP3.22□□□□□ -1.89
UBC9YDL064W ADH2P00331 348 aaKnown RBP3.21□□□□□ -1.9
UBC9YDL064W DST1P07273 309 aa3.21□□□□□ -1.9
UBC9YDL064W NAT1P12945 854 aaKnown RBP3.21□□□□□ -1.9
UBC9YDL064W CLN3P13365 580 aa3.21□□□□□ -1.9
UBC9YDL064W YCL068CP25593 260 aa3.21□□□□□ -1.9
UBC9YDL064W PHO91P27514 894 aa3.21□□□□□ -1.9
UBC9YDL064W YSC83P32792 385 aa3.21□□□□□ -1.9
UBC9YDL064W PAD1P33751 242 aaKnown RBP RIP-Chip data3.21□□□□□ -1.9not detected
UBC9YDL064W YOX1P34161 385 aa3.21□□□□□ -1.9
UBC9YDL064W CHK1P38147 527 aa3.21□□□□□ -1.9
UBC9YDL064W SBE22P38814 852 aa3.21□□□□□ -1.9
UBC9YDL064W SEC28P40509 296 aaKnown RBP3.21□□□□□ -1.9
UBC9YDL064W REE1P40893 198 aa3.21□□□□□ -1.9
UBC9YDL064W TOS2P50078 622 aa3.21□□□□□ -1.9
UBC9YDL064W PMT5P52867 743 aa3.21□□□□□ -1.9
UBC9YDL064W YIP5P53108 310 aa3.21□□□□□ -1.9
UBC9YDL064W MMT1Q03218 510 aa3.21□□□□□ -1.9
UBC9YDL064W ECM7Q06200 448 aa3.21□□□□□ -1.9
UBC9YDL064W RNH203Q12338 110 aa3.21□□□□□ -1.9
UBC9YDL064W EXG1P23776 448 aaKnown RBP3.2□□□□□ -1.9
UBC9YDL064W HSP104P31539 908 aaKnown RBP3.2□□□□□ -1.9
UBC9YDL064W KAR9P32526 644 aa3.2□□□□□ -1.9
UBC9YDL064W NRP1P32770 719 aaKnown RBP RIP-Chip data3.2□□□□□ -1.9not detected
UBC9YDL064W MNS1P32906 549 aa3.2□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 44.1 ms