RNA–Protein interactions for RNA: YBR221C

PDB1, Transcript of E1 beta subunit of the pyruvate dehydrogenase (PDH) complex, yeastyeast

Gene PDB1, Length 1,101 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PDB1YBR221C RPD3P32561 433 aa5.4□□□□□ -1.54
PDB1YBR221C UGP1P32861 499 aaKnown RBP5.4□□□□□ -1.54
PDB1YBR221C SPO23P33757 523 aa5.4□□□□□ -1.54
PDB1YBR221C ECM21P38167 1117 aaKnown RBP5.4□□□□□ -1.54
PDB1YBR221C SIC1P38634 284 aa5.4□□□□□ -1.54
PDB1YBR221C STB5P38699 743 aa5.4□□□□□ -1.54
PDB1YBR221C SKN7P38889 622 aa5.4□□□□□ -1.54
PDB1YBR221C SSY5P47002 699 aa5.4□□□□□ -1.54
PDB1YBR221C SNX4P47057 423 aa5.4□□□□□ -1.54
PDB1YBR221C RFX1P48743 811 aa5.4□□□□□ -1.54
PDB1YBR221C BUD9P53226 547 aa5.4□□□□□ -1.54
PDB1YBR221C TAF12Q03761 539 aa5.4□□□□□ -1.54
PDB1YBR221C PEX12Q04370 399 aa5.4□□□□□ -1.54
PDB1YBR221C DCR2Q05924 578 aa5.4□□□□□ -1.54
PDB1YBR221C MRPL35Q06678 367 aa5.4□□□□□ -1.54
PDB1YBR221C GPN2Q08726 347 aaPredicted RBP5.4□□□□□ -1.54
PDB1YBR221C YOR223WQ12015 292 aa5.4□□□□□ -1.54
PDB1YBR221C AIM41Q12032 185 aa5.4□□□□□ -1.54
PDB1YBR221C RRD2Q12461 358 aa5.4□□□□□ -1.54
PDB1YBR221C YDL007C-AQ2V2Q0 85 aa5.4□□□□□ -1.54
PDB1YBR221C AI5_BETAQ9ZZX0 354 aa5.4□□□□□ -1.54
PDB1YBR221C POX1P13711 748 aa5.39□□□□□ -1.55
PDB1YBR221C CBF1P17106 351 aa5.39□□□□□ -1.55
PDB1YBR221C PRP4P20053 465 aaKnown RBP5.39□□□□□ -1.55
PDB1YBR221C VPS1P21576 704 aaKnown RBP5.39□□□□□ -1.55
PDB1YBR221C YPS1P32329 569 aa5.39□□□□□ -1.55
PDB1YBR221C RIM1P32445 135 aaKnown RBP5.39□□□□□ -1.55
PDB1YBR221C SNU114P36048 1008 aaKnown RBP5.39□□□□□ -1.55
PDB1YBR221C RPF2P36160 344 aaKnown RBP5.39□□□□□ -1.55
PDB1YBR221C ALP1P38971 573 aa5.39□□□□□ -1.55
PDB1YBR221C YEL020CP39994 560 aa5.39□□□□□ -1.55
PDB1YBR221C SOK1P40317 901 aa5.39□□□□□ -1.55
PDB1YBR221C YIL108WP40483 696 aaKnown RBP5.39□□□□□ -1.55
PDB1YBR221C YAR1P46683 200 aa5.39□□□□□ -1.55
PDB1YBR221C COX16P47081 118 aa5.39□□□□□ -1.55
PDB1YBR221C SCS3P53012 380 aa5.39□□□□□ -1.55
PDB1YBR221C IPI3P53877 555 aa5.39□□□□□ -1.55
PDB1YBR221C ORC3P54790 616 aa5.39□□□□□ -1.55
PDB1YBR221C STD1Q02794 444 aa5.39□□□□□ -1.55
PDB1YBR221C SLD5Q03406 294 aa5.39□□□□□ -1.55
PDB1YBR221C YMR310CQ04867 317 aaPredicted RBP5.39□□□□□ -1.55
PDB1YBR221C SPO77Q06134 477 aa5.39□□□□□ -1.55
PDB1YBR221C IPK1Q06667 281 aa5.39□□□□□ -1.55
PDB1YBR221C YEH2Q07950 538 aa5.39□□□□□ -1.55
PDB1YBR221C DDC1Q08949 612 aa5.39□□□□□ -1.55
PDB1YBR221C YOR029WQ12243 111 aa5.39□□□□□ -1.55
PDB1YBR221C YLR108CQ12259 485 aa5.39□□□□□ -1.55
PDB1YBR221C YOR012WQ12351 137 aa5.39□□□□□ -1.55
PDB1YBR221C PAA1Q12447 191 aaKnown RBP5.39□□□□□ -1.55
PDB1YBR221C RHO1P06780 209 aaKnown RBP5.38□□□□□ -1.55
PDB1YBR221C ERG20P08524 352 aaKnown RBP5.38□□□□□ -1.55
PDB1YBR221C PMR1P13586 950 aa5.38□□□□□ -1.55
PDB1YBR221C STE18P18852 110 aa5.38□□□□□ -1.55
PDB1YBR221C LRE1P25579 583 aaKnown RBP5.38□□□□□ -1.55
PDB1YBR221C RPS5P26783 225 aaKnown RBP5.38□□□□□ -1.55
PDB1YBR221C YIM1P28625 365 aa5.38□□□□□ -1.55
PDB1YBR221C ECM25P32525 599 aa5.38□□□□□ -1.55
PDB1YBR221C GCG1P32656 232 aaKnown RBP5.38□□□□□ -1.55
PDB1YBR221C FRE1P32791 686 aa5.38□□□□□ -1.55
PDB1YBR221C PRP18P33411 251 aaPredicted RBP5.38□□□□□ -1.55
PDB1YBR221C CAF4P36130 643 aa5.38□□□□□ -1.55
PDB1YBR221C ARA1P38115 344 aa5.38□□□□□ -1.55
PDB1YBR221C LDB7P38210 180 aa5.38□□□□□ -1.55
PDB1YBR221C FIG1P38224 298 aa5.38□□□□□ -1.55
PDB1YBR221C YHR210CP38893 341 aa5.38□□□□□ -1.55
PDB1YBR221C SAK1P38990 1142 aa5.38□□□□□ -1.55
PDB1YBR221C PLB1P39105 664 aa5.38□□□□□ -1.55
PDB1YBR221C YJL206CP39529 758 aa5.38□□□□□ -1.55
PDB1YBR221C PTC2P39966 464 aaKnown RBP5.38□□□□□ -1.55
PDB1YBR221C RSM25P40496 264 aa5.38□□□□□ -1.55
PDB1YBR221C HXT9P40885 567 aa5.38□□□□□ -1.55
PDB1YBR221C PHB1P40961 287 aa5.38□□□□□ -1.55
PDB1YBR221C GAB1P41733 394 aa5.38□□□□□ -1.55
PDB1YBR221C IDS2P46958 469 aa5.38□□□□□ -1.55
PDB1YBR221C FMP33P46998 180 aa5.38□□□□□ -1.55
PDB1YBR221C UBX6P47049 396 aa5.38□□□□□ -1.55
PDB1YBR221C HXT11P54862 567 aa5.38□□□□□ -1.55
PDB1YBR221C VPS60Q03390 229 aa5.38□□□□□ -1.55
PDB1YBR221C EBS1Q03466 884 aaKnown RBP5.38□□□□□ -1.55
PDB1YBR221C SPC24Q04477 213 aa5.38□□□□□ -1.55
PDB1YBR221C VPS36Q06696 566 aa5.38□□□□□ -1.55
PDB1YBR221C MSH5Q12175 901 aa5.38□□□□□ -1.55
PDB1YBR221C DUR1,2P32528 1835 aaKnown RBP5.38□□□□□ -1.55
PDB1YBR221C COX2P00410 251 aa5.37□□□□□ -1.55
PDB1YBR221C QCR2P07257 368 aa5.37□□□□□ -1.55
PDB1YBR221C SPS4P09937 338 aa5.37□□□□□ -1.55
PDB1YBR221C YMR085WP0CF18 432 aa5.37□□□□□ -1.55
PDB1YBR221C HXT2P23585 541 aa5.37□□□□□ -1.55
PDB1YBR221C GIT1P25346 518 aa5.37□□□□□ -1.55
PDB1YBR221C SIN4P32259 974 aa5.37□□□□□ -1.55
PDB1YBR221C EMP70P32802 667 aa5.37□□□□□ -1.55
PDB1YBR221C SRP102P36057 244 aaPredicted RBP5.37□□□□□ -1.55
PDB1YBR221C DBP7P36120 742 aaKnown RBP5.37□□□□□ -1.55
PDB1YBR221C ASC1P38011 319 aaKnown RBP5.37□□□□□ -1.55
PDB1YBR221C AME1P38313 324 aa5.37□□□□□ -1.55
PDB1YBR221C MMS21P38632 267 aa5.37□□□□□ -1.55
PDB1YBR221C PFS1P38872 237 aa5.37□□□□□ -1.55
PDB1YBR221C ICE2P40499 491 aa5.37□□□□□ -1.55
PDB1YBR221C CIN5P40917 295 aa5.37□□□□□ -1.55
PDB1YBR221C SCD6P45978 349 aaKnown RBP RIP-Chip data5.37□□□□□ -1.55not detected
Retrieved 100 of 5,963 RNA–protein pairs in 15 ms