RNA–Protein interactions for RNA: YAL043C

PTA1, Transcript of Subunit of holo-CPF, yeastyeast

Gene PTA1, Length 2,358 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PTA1YAL043C BUD13P46947 266 aaPredicted RBP3.9□□□□□ -1.78
PTA1YAL043C MUP1P50276 574 aa3.9□□□□□ -1.78
PTA1YAL043C TPS1Q00764 495 aaKnown RBP3.9□□□□□ -1.78
PTA1YAL043C LAP3Q01532 483 aaKnown RBP RIP-Chip data3.9□□□□□ -1.78not detected
PTA1YAL043C SWP1Q02795 286 aa3.9□□□□□ -1.78
PTA1YAL043C YPL107WQ02873 248 aa3.9□□□□□ -1.78
PTA1YAL043C RQC1Q05468 723 aaKnown RBP3.9□□□□□ -1.78
PTA1YAL043C YDR286CQ05530 114 aa3.9□□□□□ -1.78
PTA1YAL043C YLR345WQ06137 509 aa3.9□□□□□ -1.78
PTA1YAL043C YLR352WQ06479 807 aa3.9□□□□□ -1.78
PTA1YAL043C OPT2Q06593 877 aa3.9□□□□□ -1.78
PTA1YAL043C ICL2Q12031 575 aa3.9□□□□□ -1.78
PTA1YAL043C HAL9Q12180 1030 aa3.9□□□□□ -1.78
PTA1YAL043C CBP2P03874 630 aaPredicted RBP3.9□□□□□ -1.79
PTA1YAL043C TRX3P25372 127 aa3.9□□□□□ -1.79
PTA1YAL043C ERG9P29704 444 aa3.9□□□□□ -1.79
PTA1YAL043C RPS1AP33442 255 aaKnown RBP3.9□□□□□ -1.79
PTA1YAL043C FRE2P36033 711 aa3.9□□□□□ -1.79
PTA1YAL043C RCN1P36054 211 aa3.9□□□□□ -1.79
PTA1YAL043C ARA1P38115 344 aa3.9□□□□□ -1.79
PTA1YAL043C IPT1P38954 527 aa3.9□□□□□ -1.79
PTA1YAL043C SER2P42941 309 aa3.9□□□□□ -1.79
PTA1YAL043C ALR2P43553 858 aa3.9□□□□□ -1.79
PTA1YAL043C YJR030CP47101 745 aa3.9□□□□□ -1.79
PTA1YAL043C ECL1P48235 211 aa3.9□□□□□ -1.79
PTA1YAL043C AIM14P53109 570 aa3.9□□□□□ -1.79
PTA1YAL043C CSL4P53859 292 aaPredicted RBP3.9□□□□□ -1.79
PTA1YAL043C SPP2Q02521 185 aa3.9□□□□□ -1.79
PTA1YAL043C BDS1Q08347 646 aa3.9□□□□□ -1.79
PTA1YAL043C PST2Q12335 198 aaKnown RBP3.9□□□□□ -1.79
PTA1YAL043C INH1P01097 85 aa3.89□□□□□ -1.79
PTA1YAL043C RPS4AP0CX35 261 aaKnown RBP3.89□□□□□ -1.79
PTA1YAL043C RPS4BP0CX36 261 aaKnown RBP3.89□□□□□ -1.79
PTA1YAL043C ISF1P32488 338 aa3.89□□□□□ -1.79
PTA1YAL043C NDC1P32500 655 aa3.89□□□□□ -1.79
PTA1YAL043C VPS21P36017 210 aaKnown RBP3.89□□□□□ -1.79
PTA1YAL043C LRP1P38801 184 aaKnown RBP3.89□□□□□ -1.79
PTA1YAL043C TAT2P38967 592 aa3.89□□□□□ -1.79
PTA1YAL043C SIP4P46954 829 aa3.89□□□□□ -1.79
PTA1YAL043C SNX4P47057 423 aa3.89□□□□□ -1.79
PTA1YAL043C VPS25P47142 202 aa3.89□□□□□ -1.79
PTA1YAL043C VEL1P53058 206 aa3.89□□□□□ -1.79
PTA1YAL043C MNT2P53059 558 aa3.89□□□□□ -1.79
PTA1YAL043C NPY1P53164 384 aa3.89□□□□□ -1.79
PTA1YAL043C VPS62P53285 467 aa3.89□□□□□ -1.79
PTA1YAL043C ABZ2Q03266 374 aa3.89□□□□□ -1.79
PTA1YAL043C EMI2Q04409 500 aaKnown RBP3.89□□□□□ -1.79
PTA1YAL043C URC2Q04411 772 aa3.89□□□□□ -1.79
PTA1YAL043C GAD1Q04792 585 aa3.89□□□□□ -1.79
PTA1YAL043C YPR114WQ06107 315 aa3.89□□□□□ -1.79
PTA1YAL043C YLR012CQ07927 99 aa3.89□□□□□ -1.79
PTA1YAL043C YTM1Q12024 460 aaPredicted RBP3.89□□□□□ -1.79
PTA1YAL043C RCN2Q12044 265 aa3.89□□□□□ -1.79
PTA1YAL043C Q0010Q9ZZX9 128 aa3.89□□□□□ -1.79
PTA1YAL043C RPL6BP05739 176 aaKnown RBP3.89□□□□□ -1.79
PTA1YAL043C ALG7P07286 448 aa3.89□□□□□ -1.79
PTA1YAL043C FUM1P08417 488 aaKnown RBP3.89□□□□□ -1.79
PTA1YAL043C DAL80P26343 269 aa3.89□□□□□ -1.79
PTA1YAL043C SGE1P33335 543 aa3.89□□□□□ -1.79
PTA1YAL043C YKL100CP34248 587 aa3.89□□□□□ -1.79
PTA1YAL043C POP2P39008 433 aa3.89□□□□□ -1.79
PTA1YAL043C FMC1P40491 155 aa3.89□□□□□ -1.79
PTA1YAL043C HOC1P47124 396 aa3.89□□□□□ -1.79
PTA1YAL043C CPR8P53728 308 aa3.89□□□□□ -1.79
PTA1YAL043C YAT1P80235 687 aa3.89□□□□□ -1.79
PTA1YAL043C SDH1Q00711 640 aa3.89□□□□□ -1.79
PTA1YAL043C SRL4Q03085 281 aa3.89□□□□□ -1.79
PTA1YAL043C CLU1Q03690 1277 aaKnown RBP3.89□□□□□ -1.79
PTA1YAL043C RPC11Q04307 110 aaPredicted RBP3.89□□□□□ -1.79
PTA1YAL043C NEJ1Q06148 342 aa3.89□□□□□ -1.79
PTA1YAL043C MRI1Q06489 411 aaKnown RBP3.89□□□□□ -1.79
PTA1YAL043C MFG1Q07684 458 aa3.89□□□□□ -1.79
PTA1YAL043C MCA1Q08601 432 aa3.89□□□□□ -1.79
PTA1YAL043C MCD1Q12158 566 aa3.89□□□□□ -1.79
PTA1YAL043C YMR084WA2P2R3 262 aa3.88□□□□□ -1.79
PTA1YAL043C YAR066WP0CX18 203 aa3.88□□□□□ -1.79
PTA1YAL043C YHR214WP0CX19 203 aa3.88□□□□□ -1.79
PTA1YAL043C KIN2P13186 1147 aaKnown RBP3.88□□□□□ -1.79
PTA1YAL043C APE2P32454 952 aaKnown RBP3.88□□□□□ -1.79
PTA1YAL043C KRE6P32486 720 aa3.88□□□□□ -1.79
PTA1YAL043C PEP7P32609 515 aa3.88□□□□□ -1.79
PTA1YAL043C TSA1P34760 196 aaKnown RBP3.88□□□□□ -1.79
PTA1YAL043C UTP30P36144 274 aaKnown RBP3.88□□□□□ -1.79
PTA1YAL043C SOP4P39543 234 aaPredicted RBP3.88□□□□□ -1.79
PTA1YAL043C AIM2P39721 246 aa3.88□□□□□ -1.79
PTA1YAL043C RPH1P39956 796 aa3.88□□□□□ -1.79
PTA1YAL043C EMP65P40085 556 aa3.88□□□□□ -1.79
PTA1YAL043C BTT1P40314 149 aaPredicted RBP3.88□□□□□ -1.79
PTA1YAL043C YIL161WP40449 235 aaKnown RBP3.88□□□□□ -1.79
PTA1YAL043C MNT3P40549 630 aa3.88□□□□□ -1.79
PTA1YAL043C IME4P41833 600 aa3.88□□□□□ -1.79
PTA1YAL043C QRI7P43122 407 aa3.88□□□□□ -1.79
PTA1YAL043C AIM22P47051 409 aa3.88□□□□□ -1.79
PTA1YAL043C NBP35P52920 328 aa3.88□□□□□ -1.79
PTA1YAL043C COG7P53195 279 aa3.88□□□□□ -1.79
PTA1YAL043C NQM1P53228 333 aaPredicted RBP3.88□□□□□ -1.79
PTA1YAL043C DBP6P53734 629 aaKnown RBP3.88□□□□□ -1.79
PTA1YAL043C YNR065CP53751 1116 aa3.88□□□□□ -1.79
PTA1YAL043C SSK1Q07084 712 aa3.88□□□□□ -1.79
PTA1YAL043C YOL019WQ08157 551 aa3.88□□□□□ -1.79
Retrieved 100 of 5,963 RNA–protein pairs in 17 ms