RNA–Protein interactions for RNA: ENST00000600888.2

CKS1BP3-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 3, humanhuman

BASIC

Gene CKS1BP3, Length 237 nt, Biotype processed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP3-201ENST00000600888 MAGEB10Q96LZ2 347 aaPredicted RBP5.27□□□□□ -1.57
CKS1BP3-201ENST00000600888 KCNJ15Q99712 375 aa5.27□□□□□ -1.57
CKS1BP3-201ENST00000600888 IPPKQ9H8X2 491 aa5.27□□□□□ -1.57
CKS1BP3-201ENST00000600888 CD320Q9NPF0 282 aa5.27□□□□□ -1.57
CKS1BP3-201ENST00000600888 CFDP1Q9UEE9 299 aaPredicted RBP5.27□□□□□ -1.57
CKS1BP3-201ENST00000600888 PCDHA9Q9Y5H5 950 aa5.27□□□□□ -1.57
CKS1BP3-201ENST00000600888 MRPL42Q9Y6G3 142 aaKnown RBP5.27□□□□□ -1.57
CKS1BP3-201ENST00000600888 C3P01024 1663 aa5.27□□□□□ -1.57
CKS1BP3-201ENST00000600888 PREX1Q8TCU6 1659 aa5.27□□□□□ -1.57
CKS1BP3-201ENST00000600888 ATP7AQ04656 1500 aa5.27□□□□□ -1.57
CKS1BP3-201ENST00000600888 NCOA2Q15596 1464 aa5.26□□□□□ -1.57
CKS1BP3-201ENST00000600888 LRRC9Q6ZRR7 1453 aa5.26□□□□□ -1.57
CKS1BP3-201ENST00000600888 MBD5Q9P267 1494 aa5.26□□□□□ -1.57
CKS1BP3-201ENST00000600888 ARHGEF5Q12774 1597 aa5.26□□□□□ -1.57
CKS1BP3-201ENST00000600888 RTEL1-TNFRSF6BF6WH68 1400 aa5.26□□□□□ -1.57
CKS1BP3-201ENST00000600888 TCAF2A6NFQ2 919 aa5.26□□□□□ -1.57
CKS1BP3-201ENST00000600888 ARVCFO00192 962 aa5.26□□□□□ -1.57
CKS1BP3-201ENST00000600888 PPP1R12AO14974 1030 aaPredicted RBP5.26□□□□□ -1.57
CKS1BP3-201ENST00000600888 ASGR2P07307 311 aa5.26□□□□□ -1.57
CKS1BP3-201ENST00000600888 COL6A2P12110 1019 aa5.26□□□□□ -1.57
CKS1BP3-201ENST00000600888 NCAM1P13591 858 aa5.26□□□□□ -1.57
CKS1BP3-201ENST00000600888 PMLP29590 882 aa5.26□□□□□ -1.57
CKS1BP3-201ENST00000600888 FNDC3BQ53EP0 1204 aaKnown RBP5.26□□□□□ -1.57
CKS1BP3-201ENST00000600888 EMC4Q5J8M3 183 aa5.26□□□□□ -1.57
CKS1BP3-201ENST00000600888 OTOP3Q7RTS5 596 aa5.26□□□□□ -1.57
CKS1BP3-201ENST00000600888 PIP4K2CQ8TBX8 421 aa5.26□□□□□ -1.57
CKS1BP3-201ENST00000600888 CLUHP3Q96NS8 147 aa5.26□□□□□ -1.57
CKS1BP3-201ENST00000600888 RNF38Q9H0F5 515 aa5.26□□□□□ -1.57
CKS1BP3-201ENST00000600888 SLC6A20Q9NP91 592 aa5.26□□□□□ -1.57
CKS1BP3-201ENST00000600888 SFMBT1Q9UHJ3 866 aa5.26□□□□□ -1.57
CKS1BP3-201ENST00000600888 ZNF652Q9Y2D9 606 aa5.26□□□□□ -1.57
CKS1BP3-201ENST00000600888 LMTK3Q96Q04 1460 aa5.26□□□□□ -1.57
CKS1BP3-201ENST00000600888 KRIT1O00522 736 aa5.25□□□□□ -1.57
CKS1BP3-201ENST00000600888 IRS4O14654 1257 aaPredicted RBP5.25□□□□□ -1.57
CKS1BP3-201ENST00000600888 WNT9AO14904 365 aa5.25□□□□□ -1.57
CKS1BP3-201ENST00000600888 BUB1BO60566 1050 aaPredicted RBP5.25□□□□□ -1.57
CKS1BP3-201ENST00000600888 ASMTLO95671 621 aa5.25□□□□□ -1.57
CKS1BP3-201ENST00000600888 GNAT1P11488 350 aa5.25□□□□□ -1.57
CKS1BP3-201ENST00000600888 ATF2P15336 505 aa5.25□□□□□ -1.57
CKS1BP3-201ENST00000600888 PFKLP17858 780 aa5.25□□□□□ -1.57
CKS1BP3-201ENST00000600888 IGFBP6P24592 240 aaPredicted RBP5.25□□□□□ -1.57
CKS1BP3-201ENST00000600888 SPIRE1Q08AE8 756 aa5.25□□□□□ -1.57
CKS1BP3-201ENST00000600888 AMIGO3Q86WK7 504 aa5.25□□□□□ -1.57
CKS1BP3-201ENST00000600888 ANKLE2Q86XL3 938 aa5.25□□□□□ -1.57
CKS1BP3-201ENST00000600888 HOMER1Q86YM7 354 aa5.25□□□□□ -1.57
CKS1BP3-201ENST00000600888 SYNPOQ8N3V7 929 aa5.25□□□□□ -1.57
CKS1BP3-201ENST00000600888 CPA5Q8WXQ8 436 aa5.25□□□□□ -1.57
CKS1BP3-201ENST00000600888 APPBP2Q92624 585 aa5.25□□□□□ -1.57
CKS1BP3-201ENST00000600888 SCLYQ96I15 445 aa5.25□□□□□ -1.57
CKS1BP3-201ENST00000600888 SIGLEC10Q96LC7 697 aa5.25□□□□□ -1.57
CKS1BP3-201ENST00000600888 SMOC1Q9H4F8 434 aa5.25□□□□□ -1.57
CKS1BP3-201ENST00000600888 TRIM39Q9HCM9 518 aa5.25□□□□□ -1.57
CKS1BP3-201ENST00000600888 FANCLQ9NW38 375 aa5.25□□□□□ -1.57
CKS1BP3-201ENST00000600888 IRAK3Q9Y616 596 aa5.25□□□□□ -1.57
CKS1BP3-201ENST00000600888 MAST1Q9Y2H9 1570 aa5.25□□□□□ -1.57
CKS1BP3-201ENST00000600888 SPAG9O60271 1321 aaKnown RBP5.24□□□□□ -1.57
CKS1BP3-201ENST00000600888 MIA2Q96PC5 1412 aa5.24□□□□□ -1.57
CKS1BP3-201ENST00000600888 FAM135AQ9P2D6 1515 aa5.24□□□□□ -1.57
CKS1BP3-201ENST00000600888 TCRBV5S2A0A599 114 aa5.24□□□□□ -1.57
CKS1BP3-201ENST00000600888 TLDC2A0PJX2 215 aa5.24□□□□□ -1.57
CKS1BP3-201ENST00000600888 NPIPB6E9PJ23 425 aa5.24□□□□□ -1.57
CKS1BP3-201ENST00000600888 NKRFO15226 690 aaKnown RBP eCLIP5.24□□□□□ -1.57
CKS1BP3-201ENST00000600888 MAFKO60675 156 aa5.24□□□□□ -1.57
CKS1BP3-201ENST00000600888 RASGRP1O95267 797 aa5.24□□□□□ -1.57
CKS1BP3-201ENST00000600888 SRGAP2CP0DJJ0 459 aa5.24□□□□□ -1.57
CKS1BP3-201ENST00000600888 HNRNPMP52272 730 aaKnown RBP eCLIP5.24□□□□□ -1.57
CKS1BP3-201ENST00000600888 TCEA2Q15560 299 aa5.24□□□□□ -1.57
CKS1BP3-201ENST00000600888 KCNA10Q16322 511 aa5.24□□□□□ -1.57
CKS1BP3-201ENST00000600888 HABP4Q5JVS0 413 aaKnown RBP5.24□□□□□ -1.57
CKS1BP3-201ENST00000600888 CYP4F22Q6NT55 531 aa5.24□□□□□ -1.57
CKS1BP3-201ENST00000600888 GIMAP6Q6P9H5 292 aa5.24□□□□□ -1.57
CKS1BP3-201ENST00000600888 C16orf86Q6ZW13 317 aa5.24□□□□□ -1.57
CKS1BP3-201ENST00000600888 BRAPQ7Z569 592 aa5.24□□□□□ -1.57
CKS1BP3-201ENST00000600888 FGD2Q7Z6J4 655 aa5.24□□□□□ -1.57
CKS1BP3-201ENST00000600888 MIB1Q86YT6 1006 aa5.24□□□□□ -1.57
CKS1BP3-201ENST00000600888 TMEFF1Q8IYR6 380 aa5.24□□□□□ -1.57
CKS1BP3-201ENST00000600888 PHOSPHO1Q8TCT1 267 aa5.24□□□□□ -1.57
CKS1BP3-201ENST00000600888 FBXW5Q969U6 566 aa5.24□□□□□ -1.57
CKS1BP3-201ENST00000600888 GOLGA2P5Q9HBQ8 144 aa5.24□□□□□ -1.57
CKS1BP3-201ENST00000600888 MYOTQ9UBF9 498 aa5.24□□□□□ -1.57
CKS1BP3-201ENST00000600888 CNOT6Q9ULM6 557 aaKnown RBP5.24□□□□□ -1.57
CKS1BP3-201ENST00000600888 TBX22Q9Y458 520 aa5.24□□□□□ -1.57
CKS1BP3-201ENST00000600888 PCDHB4Q9Y5E5 795 aa5.24□□□□□ -1.57
CKS1BP3-201ENST00000600888 A2MP01023 1474 aa5.24□□□□□ -1.57
CKS1BP3-201ENST00000600888 CAMSAP2Q08AD1 1489 aa5.24□□□□□ -1.57
CKS1BP3-201ENST00000600888 CCDC141Q6ZP82 1450 aa5.24□□□□□ -1.57
CKS1BP3-201ENST00000600888 CNTLNQ9NXG0 1405 aa5.23□□□□□ -1.57
CKS1BP3-201ENST00000600888 TCRBV16S1A1N1A0A5B0 115 aa5.23□□□□□ -1.57
CKS1BP3-201ENST00000600888 DBX1A6NMT0 343 aa5.23□□□□□ -1.57
CKS1BP3-201ENST00000600888 SLC27A2O14975 620 aa5.23□□□□□ -1.57
CKS1BP3-201ENST00000600888 GSTA4O15217 222 aa5.23□□□□□ -1.57
CKS1BP3-201ENST00000600888 RFPL3O75679 317 aa5.23□□□□□ -1.57
CKS1BP3-201ENST00000600888 APPP05067 770 aa5.23□□□□□ -1.57
CKS1BP3-201ENST00000600888 PYGMP11217 842 aa5.23□□□□□ -1.57
CKS1BP3-201ENST00000600888 MC3RP41968 323 aa5.23□□□□□ -1.57
CKS1BP3-201ENST00000600888 LINC00310P59036 64 aa5.23□□□□□ -1.57
CKS1BP3-201ENST00000600888 FOXO4P98177 505 aa5.23□□□□□ -1.57
CKS1BP3-201ENST00000600888 CACNB2Q08289 660 aaPredicted RBP5.23□□□□□ -1.57
CKS1BP3-201ENST00000600888 SSPNQ14714 243 aa5.23□□□□□ -1.57
CKS1BP3-201ENST00000600888 ETV3LQ6ZN32 361 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms