RNA–Protein interactions for RNA: ENST00000578049.3

SEC22B-201, Transcript of SEC22 homolog B, vesicle trafficking protein (gene/pseudogene), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22B, Length 6,922 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22B-201ENST00000578049 CHGBP05060 677 aa11.58□□□□□ -0.56
SEC22B-201ENST00000578049 CUL4BQ13620 913 aa11.58□□□□□ -0.56
SEC22B-201ENST00000578049 TFDP1Q14186 410 aa11.58□□□□□ -0.56
SEC22B-201ENST00000578049 PCGF5Q86SE9 256 aa11.58□□□□□ -0.56
SEC22B-201ENST00000578049 CPXCR1Q8N123 301 aa11.58□□□□□ -0.56
SEC22B-201ENST00000578049 STAMBPL1Q96FJ0 436 aa11.58□□□□□ -0.56
SEC22B-201ENST00000578049 PTPN22Q9Y2R2 807 aa11.58□□□□□ -0.56
SEC22B-201ENST00000578049 M0R2C6 588 aa11.58□□□□□ -0.56
SEC22B-201ENST00000578049 CREB3O43889 395 aa11.58□□□□□ -0.56
SEC22B-201ENST00000578049 TTLL1O95922 423 aa11.58□□□□□ -0.56
SEC22B-201ENST00000578049 CERKLQ49MI3 558 aaPredicted RBP11.58□□□□□ -0.56
SEC22B-201ENST00000578049 SRLQ86TD4 932 aa11.58□□□□□ -0.56
SEC22B-201ENST00000578049 TAF1DQ9H5J8 278 aaPredicted RBP11.58□□□□□ -0.56
SEC22B-201ENST00000578049 ADAMTS1Q9UHI8 967 aa11.58□□□□□ -0.56
SEC22B-201ENST00000578049 ORC6Q9Y5N6 252 aa11.58□□□□□ -0.56
SEC22B-201ENST00000578049 GGCXP38435 758 aa11.58□□□□□ -0.56
SEC22B-201ENST00000578049 ALX1Q15699 326 aa11.58□□□□□ -0.56
SEC22B-201ENST00000578049 DNAJC24Q6P3W2 148 aa11.58□□□□□ -0.56
SEC22B-201ENST00000578049 SCYL2Q6P3W7 929 aa11.58□□□□□ -0.56
SEC22B-201ENST00000578049 SMCR8Q8TEV9 937 aaPredicted RBP11.58□□□□□ -0.56
SEC22B-201ENST00000578049 FGGP02679 453 aa11.58□□□□□ -0.56
SEC22B-201ENST00000578049 DLATP10515 647 aaKnown RBP11.58□□□□□ -0.56
SEC22B-201ENST00000578049 PIK3CAP42336 1068 aa11.58□□□□□ -0.56
SEC22B-201ENST00000578049 MDM2Q00987 491 aaPredicted RBP11.58□□□□□ -0.56
SEC22B-201ENST00000578049 PABPC4Q13310 644 aaKnown RBP eCLIP11.58□□□□□ -0.56
SEC22B-201ENST00000578049 ZNF449Q6P9G9 518 aa11.58□□□□□ -0.56
SEC22B-201ENST00000578049 TTC16Q8NEE8 873 aa11.58□□□□□ -0.56
SEC22B-201ENST00000578049 KANSL2Q9H9L4 492 aa11.58□□□□□ -0.56
SEC22B-201ENST00000578049 CAPN9O14815 690 aa11.57□□□□□ -0.56
SEC22B-201ENST00000578049 DLGAP5Q15398 846 aa11.57□□□□□ -0.56
SEC22B-201ENST00000578049 NLRP14Q86W24 1093 aa11.57□□□□□ -0.56
SEC22B-201ENST00000578049 GLG1Q92896 1179 aa11.57□□□□□ -0.56
SEC22B-201ENST00000578049 CHMP6Q96FZ7 201 aa11.57□□□□□ -0.56
SEC22B-201ENST00000578049 ZSWIM5Q9P217 1185 aa11.57□□□□□ -0.56
SEC22B-201ENST00000578049 KRT38O76015 456 aa11.57□□□□□ -0.56
SEC22B-201ENST00000578049 SASH1O94885 1247 aa11.57□□□□□ -0.56
SEC22B-201ENST00000578049 AP3B2Q13367 1082 aa11.57□□□□□ -0.56
SEC22B-201ENST00000578049 KLHL38Q2WGJ6 581 aa11.57□□□□□ -0.56
SEC22B-201ENST00000578049 TOGARAM2Q6ZUX3 1019 aa11.57□□□□□ -0.56
SEC22B-201ENST00000578049 ELAC2Q9BQ52 826 aaKnown RBP11.57□□□□□ -0.56
SEC22B-201ENST00000578049 TLK1Q9UKI8 766 aa11.57□□□□□ -0.56
SEC22B-201ENST00000578049 CEP170Q5SW79 1584 aa11.57□□□□□ -0.56
SEC22B-201ENST00000578049 KRT1P04264 644 aa11.57□□□□□ -0.56
SEC22B-201ENST00000578049 GYG1P46976 350 aa11.57□□□□□ -0.56
SEC22B-201ENST00000578049 POLE2P56282 527 aa11.57□□□□□ -0.56
SEC22B-201ENST00000578049 FAM160B1Q5W0V3 765 aa11.57□□□□□ -0.56
SEC22B-201ENST00000578049 PPWD1Q96BP3 646 aaKnown RBP11.57□□□□□ -0.56
SEC22B-201ENST00000578049 ERVV-1B6SEH8 477 aa11.57□□□□□ -0.56
SEC22B-201ENST00000578049 CTIFO43310 598 aaKnown RBP11.57□□□□□ -0.56
SEC22B-201ENST00000578049 CXCR5P32302 372 aa11.57□□□□□ -0.56
SEC22B-201ENST00000578049 BTDP43251 543 aa11.57□□□□□ -0.56
SEC22B-201ENST00000578049 FSCBQ5H9T9 825 aa11.57□□□□□ -0.56
SEC22B-201ENST00000578049 RSBN1LQ6PCB5 846 aaPredicted RBP11.57□□□□□ -0.56
SEC22B-201ENST00000578049 RFX6Q8HWS3 928 aa11.57□□□□□ -0.56
SEC22B-201ENST00000578049 CRLF3Q8IUI8 442 aa11.57□□□□□ -0.56
SEC22B-201ENST00000578049 BBS5Q8N3I7 341 aa11.57□□□□□ -0.56
SEC22B-201ENST00000578049 TRIM15Q9C019 465 aa11.57□□□□□ -0.56
SEC22B-201ENST00000578049 GPHNQ9NQX3 736 aaPredicted RBP11.57□□□□□ -0.56
SEC22B-201ENST00000578049 DHX34Q14147 1143 aaKnown RBP11.57□□□□□ -0.56
SEC22B-201ENST00000578049 CCDC144BQ3MJ40 725 aa11.57□□□□□ -0.56
SEC22B-201ENST00000578049 GUF1Q8N442 669 aaKnown RBP11.57□□□□□ -0.56
SEC22B-201ENST00000578049 PIP4K2CQ8TBX8 421 aa11.57□□□□□ -0.56
SEC22B-201ENST00000578049 PPCSQ9HAB8 311 aa11.57□□□□□ -0.56
SEC22B-201ENST00000578049 ARHGAP10A1A4S6 786 aa11.56□□□□□ -0.56
SEC22B-201ENST00000578049 MEFVO15553 781 aaPredicted RBP11.56□□□□□ -0.56
SEC22B-201ENST00000578049 GFPT2O94808 682 aa11.56□□□□□ -0.56
SEC22B-201ENST00000578049 PLA2G4BP0C869 781 aa11.56□□□□□ -0.56
SEC22B-201ENST00000578049 ECE1P42892 770 aa11.56□□□□□ -0.56
SEC22B-201ENST00000578049 PPP1R18Q6NYC8 613 aa11.56□□□□□ -0.56
SEC22B-201ENST00000578049 CAPN12Q6ZSI9 719 aa11.56□□□□□ -0.56
SEC22B-201ENST00000578049 GRAMD1CQ8IYS0 662 aa11.56□□□□□ -0.56
SEC22B-201ENST00000578049 DTNBP1Q96EV8 351 aa11.56□□□□□ -0.56
SEC22B-201ENST00000578049 KIFC3Q9BVG8 833 aa11.56□□□□□ -0.56
SEC22B-201ENST00000578049 NDE1Q9NXR1 346 aa11.56□□□□□ -0.56
SEC22B-201ENST00000578049 ZDHHC9Q9Y397 364 aa11.56□□□□□ -0.56
SEC22B-201ENST00000578049 PPP1R37O75864 691 aa11.56□□□□□ -0.56
SEC22B-201ENST00000578049 ARL4CP56559 192 aa11.56□□□□□ -0.56
SEC22B-201ENST00000578049 OSBPL9Q96SU4 736 aa11.56□□□□□ -0.56
SEC22B-201ENST00000578049 PCDHB4Q9Y5E5 795 aa11.56□□□□□ -0.56
SEC22B-201ENST00000578049 ITIH6Q6UXX5 1313 aa11.56□□□□□ -0.56
SEC22B-201ENST00000578049 KAT6BQ8WYB5 2073 aa11.56□□□□□ -0.56
SEC22B-201ENST00000578049 M0QZ92 97 aa11.56□□□□□ -0.56
SEC22B-201ENST00000578049 GABPAQ06546 454 aa11.56□□□□□ -0.56
SEC22B-201ENST00000578049 LRIG3Q6UXM1 1119 aa11.56□□□□□ -0.56
SEC22B-201ENST00000578049 PYROXD1Q8WU10 500 aa11.56□□□□□ -0.56
SEC22B-201ENST00000578049 GREM2Q9H772 168 aa11.56□□□□□ -0.56
SEC22B-201ENST00000578049 ZNF804BA4D1E1 1349 aa11.56□□□□□ -0.56
SEC22B-201ENST00000578049 TJP3O95049 919 aa11.56□□□□□ -0.56
SEC22B-201ENST00000578049 PPARDQ03181 441 aa11.56□□□□□ -0.56
SEC22B-201ENST00000578049 BYSLQ13895 437 aaKnown RBP11.56□□□□□ -0.56
SEC22B-201ENST00000578049 KCNB1Q14721 858 aa11.56□□□□□ -0.56
SEC22B-201ENST00000578049 ARHGEF16Q5VV41 709 aa11.56□□□□□ -0.56
SEC22B-201ENST00000578049 DCAF15Q66K64 600 aa11.56□□□□□ -0.56
SEC22B-201ENST00000578049 PODNQ7Z5L7 613 aa11.56□□□□□ -0.56
SEC22B-201ENST00000578049 ARMC2Q8NEN0 867 aa11.56□□□□□ -0.56
SEC22B-201ENST00000578049 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.56□□□□□ -0.567e-6■■□□□ 12.2
SEC22B-201ENST00000578049 USP6P35125 1406 aa11.56□□□□□ -0.56
SEC22B-201ENST00000578049 ZNF233A6NK53 670 aa11.56□□□□□ -0.56
SEC22B-201ENST00000578049 GYG2O15488 501 aa11.56□□□□□ -0.56
SEC22B-201ENST00000578049 TMOD1P28289 359 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms