RNA–Protein interactions for RNA: YPL232W

SSO1, Transcript of Plasma membrane t-SNARE, yeast

Gene SSO1, Length 873 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SSO1	YPL232W	YOS9	Q99220	542 aa		4.77	□□□□□ -1.65
SSO1	YPL232W	Q0010	Q9ZZX9	128 aa		4.77	□□□□□ -1.65
SSO1	YPL232W	RPS17A	P02407	136 aa	Known RBP	4.76	□□□□□ -1.65
SSO1	YPL232W	SPT3	P06844	337 aa		4.76	□□□□□ -1.65
SSO1	YPL232W	GCD2	P12754	651 aa	Predicted RBP	4.76	□□□□□ -1.65
SSO1	YPL232W	RPS17B	P14127	136 aa	Known RBP	4.76	□□□□□ -1.65
SSO1	YPL232W	AMD2	P22580	549 aa		4.76	□□□□□ -1.65
SSO1	YPL232W	STO1	P34160	861 aa	Known RBP	4.76	□□□□□ -1.65
SSO1	YPL232W	YMR144W	P40214	342 aa	Known RBP	4.76	□□□□□ -1.65
SSO1	YPL232W	YRB1	P41920	201 aa	Known RBP	4.76	□□□□□ -1.65
SSO1	YPL232W	MPS3	P47069	682 aa		4.76	□□□□□ -1.65
SSO1	YPL232W	PGU1	P47180	361 aa		4.76	□□□□□ -1.65
SSO1	YPL232W	ATP22	P50273	684 aa	Predicted RBP	4.76	□□□□□ -1.65
SSO1	YPL232W	CWC22	P53333	577 aa	Known RBP	4.76	□□□□□ -1.65
SSO1	YPL232W	EFR3	Q03653	782 aa	Known RBP	4.76	□□□□□ -1.65
SSO1	YPL232W	PLB2	Q03674	706 aa		4.76	□□□□□ -1.65
SSO1	YPL232W	MIX14	Q04341	121 aa		4.76	□□□□□ -1.65
SSO1	YPL232W	ISR1	Q06098	443 aa	Known RBP	4.76	□□□□□ -1.65
SSO1	YPL232W	YLR177W	Q06251	628 aa		4.76	□□□□□ -1.65
SSO1	YPL232W	MHT1	Q12525	324 aa		4.76	□□□□□ -1.65
SSO1	YPL232W	CMD1	P06787	147 aa	Known RBP	4.75	□□□□□ -1.65
SSO1	YPL232W	RPL20A	P0CX23	172 aa	Known RBP	4.75	□□□□□ -1.65
SSO1	YPL232W	RPL20B	P0CX24	172 aa	Predicted RBP	4.75	□□□□□ -1.65
SSO1	YPL232W	CBF1	P17106	351 aa		4.75	□□□□□ -1.65
SSO1	YPL232W	GPI12	P23797	304 aa		4.75	□□□□□ -1.65
SSO1	YPL232W	UBC6	P33296	250 aa	Predicted RBP	4.75	□□□□□ -1.65
SSO1	YPL232W	AUR1	P36107	401 aa	Predicted RBP	4.75	□□□□□ -1.65
SSO1	YPL232W	ARL1	P38116	183 aa	Known RBP	4.75	□□□□□ -1.65
SSO1	YPL232W	GAT2	P40209	560 aa		4.75	□□□□□ -1.65
SSO1	YPL232W	IBD2	P53892	351 aa		4.75	□□□□□ -1.65
SSO1	YPL232W	COG6	P53959	839 aa		4.75	□□□□□ -1.65
SSO1	YPL232W	HRI1	Q05905	244 aa	Known RBP	4.75	□□□□□ -1.65
SSO1	YPL232W	SEI1	Q06058	285 aa		4.75	□□□□□ -1.65
SSO1	YPL232W	YLR446W	Q06204	433 aa		4.75	□□□□□ -1.65
SSO1	YPL232W	RIF2	Q06208	395 aa		4.75	□□□□□ -1.65
SSO1	YPL232W	YPL247C	Q12523	523 aa		4.75	□□□□□ -1.65
SSO1	YPL232W	YOR019W	Q99248	730 aa		4.75	□□□□□ -1.65
SSO1	YPL232W	TAD3	Q9URQ3	322 aa		4.75	□□□□□ -1.65
SSO1	YPL232W	STE7	P06784	515 aa		4.74	□□□□□ -1.65
SSO1	YPL232W	GCY1	P14065	312 aa	Known RBP RIP-Chip data	4.74	□□□□□ -1.65	not detected
SSO1	YPL232W	PDA1	P16387	420 aa	Known RBP	4.74	□□□□□ -1.65
SSO1	YPL232W	ARE1	P25628	610 aa		4.74	□□□□□ -1.65
SSO1	YPL232W	PAP1	P29468	568 aa	Known RBP	4.74	□□□□□ -1.65
SSO1	YPL232W	LOT5	P34234	306 aa		4.74	□□□□□ -1.65
SSO1	YPL232W	BET3	P36149	193 aa		4.74	□□□□□ -1.65
SSO1	YPL232W	YKR078W	P36158	585 aa	Known RBP	4.74	□□□□□ -1.65
SSO1	YPL232W	BMT2	P38278	337 aa		4.74	□□□□□ -1.65
SSO1	YPL232W	BZZ1	P38822	633 aa		4.74	□□□□□ -1.65
SSO1	YPL232W	PTH1	P38876	190 aa	Known RBP	4.74	□□□□□ -1.65
SSO1	YPL232W	HRB1	P38922	454 aa	Known RBP RIP-Chip data	4.74	□□□□□ -1.65	not detected
SSO1	YPL232W	SEN34	P39707	275 aa		4.74	□□□□□ -1.65
SSO1	YPL232W	TED1	P40533	473 aa		4.74	□□□□□ -1.65
SSO1	YPL232W	YIL001W	P40560	513 aa		4.74	□□□□□ -1.65
SSO1	YPL232W	FKH2	P41813	862 aa		4.74	□□□□□ -1.65
SSO1	YPL232W	MIC19	P43594	170 aa		4.74	□□□□□ -1.65
SSO1	YPL232W	YGL176C	P46945	554 aa		4.74	□□□□□ -1.65
SSO1	YPL232W	MPA43	P53583	542 aa	Predicted RBP	4.74	□□□□□ -1.65
SSO1	YPL232W	YLR460C	P54007	376 aa		4.74	□□□□□ -1.65
SSO1	YPL232W	YPL107W	Q02873	248 aa		4.74	□□□□□ -1.65
SSO1	YPL232W	GIS1	Q03833	894 aa		4.74	□□□□□ -1.65
SSO1	YPL232W	CSN9	Q03981	162 aa		4.74	□□□□□ -1.65
SSO1	YPL232W	HPT1	Q04178	221 aa	Known RBP	4.74	□□□□□ -1.65
SSO1	YPL232W	API2	Q04413	109 aa		4.74	□□□□□ -1.65
SSO1	YPL232W	VAC14	Q06708	880 aa		4.74	□□□□□ -1.65
SSO1	YPL232W	YLL007C	Q07799	665 aa		4.74	□□□□□ -1.65
SSO1	YPL232W	YOR365C	Q08844	703 aa		4.74	□□□□□ -1.65
SSO1	YPL232W	NMD4	Q12129	218 aa		4.74	□□□□□ -1.65
SSO1	YPL232W	MMP1	Q12372	583 aa		4.74	□□□□□ -1.65
SSO1	YPL232W	SFG1	Q12507	346 aa		4.74	□□□□□ -1.65
SSO1	YPL232W	YCL012C	Q8J0M4	134 aa		4.74	□□□□□ -1.65
SSO1	YPL232W	HEM2	P05373	342 aa		4.73	□□□□□ -1.65
SSO1	YPL232W	ERD1	P16151	362 aa		4.73	□□□□□ -1.65
SSO1	YPL232W	SGV1	P23293	657 aa	Known RBP	4.73	□□□□□ -1.65
SSO1	YPL232W	SLM5	P25345	492 aa	Known RBP	4.73	□□□□□ -1.65
SSO1	YPL232W	PHO87	P25360	923 aa		4.73	□□□□□ -1.65
SSO1	YPL232W	IME2	P32581	645 aa		4.73	□□□□□ -1.65
SSO1	YPL232W	MRT4	P33201	236 aa	Known RBP	4.73	□□□□□ -1.65
SSO1	YPL232W	TPO5	P36029	618 aa		4.73	□□□□□ -1.65
SSO1	YPL232W	GLG1	P36143	616 aa		4.73	□□□□□ -1.65
SSO1	YPL232W	TRR2	P38816	342 aa		4.73	□□□□□ -1.65
SSO1	YPL232W	PZF1	P39933	429 aa		4.73	□□□□□ -1.65
SSO1	YPL232W	SOK1	P40317	901 aa		4.73	□□□□□ -1.65
SSO1	YPL232W	SHR5	P41912	237 aa		4.73	□□□□□ -1.65
SSO1	YPL232W	APS3	P47064	194 aa		4.73	□□□□□ -1.65
SSO1	YPL232W	TIM10	P87108	93 aa		4.73	□□□□□ -1.65
SSO1	YPL232W	RMI1	Q02685	241 aa		4.73	□□□□□ -1.65
SSO1	YPL232W	URH1	Q04179	340 aa		4.73	□□□□□ -1.65
SSO1	YPL232W	YMR027W	Q04371	470 aa		4.73	□□□□□ -1.65
SSO1	YPL232W	YPR172W	Q06608	200 aa		4.73	□□□□□ -1.65
SSO1	YPL232W	YPR091C	Q06833	770 aa		4.73	□□□□□ -1.65
SSO1	YPL232W	YTM1	Q12024	460 aa	Predicted RBP	4.73	□□□□□ -1.65
SSO1	YPL232W	RRP36	Q12481	300 aa	Predicted RBP	4.73	□□□□□ -1.65
SSO1	YPL232W	HEM15	P16622	393 aa		4.72	□□□□□ -1.65
SSO1	YPL232W	SPO16	P17122	198 aa		4.72	□□□□□ -1.65
SSO1	YPL232W	KAR4	P25583	335 aa		4.72	□□□□□ -1.65
SSO1	YPL232W	MSN2	P33748	704 aa		4.72	□□□□□ -1.65
SSO1	YPL232W	MNN2	P38069	597 aa		4.72	□□□□□ -1.65
SSO1	YPL232W	DTR1	P38125	572 aa		4.72	□□□□□ -1.65
SSO1	YPL232W	FES1	P38260	290 aa		4.72	□□□□□ -1.65
SSO1	YPL232W	HSM3	P38348	480 aa		4.72	□□□□□ -1.65

Retrieved 100 of 5,963 RNA–protein pairs in 22.4 ms