RNA–Protein interactions for RNA: YOR319W

HSH49, Transcript of U2-snRNP associated splicing factor, yeastyeast

Gene HSH49, Length 642 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HSH49YOR319W NSE1Q07913 336 aa3.65□□□□□ -1.83
HSH49YOR319W NRT1Q08485 598 aa3.65□□□□□ -1.83
HSH49YOR319W YPT1P01123 206 aaKnown RBP3.64□□□□□ -1.83
HSH49YOR319W RPL42AP0CX27 106 aaKnown RBP3.64□□□□□ -1.83
HSH49YOR319W RPL42BP0CX28 106 aaKnown RBP3.64□□□□□ -1.83
HSH49YOR319W RAD57P25301 460 aa3.64□□□□□ -1.83
HSH49YOR319W GPI16P38875 610 aa3.64□□□□□ -1.83
HSH49YOR319W YAL037WP39728 267 aa3.64□□□□□ -1.83
HSH49YOR319W ELP2P42935 788 aa3.64□□□□□ -1.83
HSH49YOR319W BRO1P48582 844 aa3.64□□□□□ -1.83
HSH49YOR319W YNR068CP53754 272 aa3.64□□□□□ -1.83
HSH49YOR319W TDA7P53882 636 aaPredicted RBP3.64□□□□□ -1.83
HSH49YOR319W YNL143CP53908 130 aa3.64□□□□□ -1.83
HSH49YOR319W YMR254CQ04838 102 aa3.64□□□□□ -1.83
HSH49YOR319W MRPL51Q06090 140 aaPredicted RBP3.64□□□□□ -1.83
HSH49YOR319W SPH1Q06160 661 aa3.64□□□□□ -1.83
HSH49YOR319W VPS74Q06385 345 aa3.64□□□□□ -1.83
HSH49YOR319W IPK1Q06667 281 aa3.64□□□□□ -1.83
HSH49YOR319W YEH2Q07950 538 aa3.64□□□□□ -1.83
HSH49YOR319W REX4Q08237 289 aa3.64□□□□□ -1.83
HSH49YOR319W SGT1Q08446 395 aa3.64□□□□□ -1.83
HSH49YOR319W YLL056CQ12177 298 aa3.64□□□□□ -1.83
HSH49YOR319W YDL009CQ12210 107 aa3.64□□□□□ -1.83
HSH49YOR319W ILV5P06168 395 aaKnown RBP3.63□□□□□ -1.83
HSH49YOR319W TAL1P15019 335 aaKnown RBP3.63□□□□□ -1.83
HSH49YOR319W RDS1P25611 832 aa3.63□□□□□ -1.83
HSH49YOR319W ERG1P32476 496 aaKnown RBP3.63□□□□□ -1.83
HSH49YOR319W NRP1P32770 719 aaKnown RBP RIP-Chip data3.63□□□□□ -1.83not detected
HSH49YOR319W SRB2P34162 210 aa3.63□□□□□ -1.83
HSH49YOR319W INM1P38710 295 aa3.63□□□□□ -1.83
HSH49YOR319W PAC11P40960 533 aa3.63□□□□□ -1.83
HSH49YOR319W EFM3P47163 339 aa3.63□□□□□ -1.83
HSH49YOR319W YIP1P53039 248 aa3.63□□□□□ -1.83
HSH49YOR319W YIP5P53108 310 aa3.63□□□□□ -1.83
HSH49YOR319W PCP1P53259 346 aa3.63□□□□□ -1.83
HSH49YOR319W GPI15P53961 229 aa3.63□□□□□ -1.83
HSH49YOR319W IRC15Q02733 499 aa3.63□□□□□ -1.83
HSH49YOR319W PNG1Q02890 363 aa3.63□□□□□ -1.83
HSH49YOR319W PRP3Q03338 469 aaPredicted RBP3.63□□□□□ -1.83
HSH49YOR319W URH1Q04179 340 aa3.63□□□□□ -1.83
HSH49YOR319W RRB1Q04225 511 aaKnown RBP3.63□□□□□ -1.83
HSH49YOR319W YMR087WQ04299 284 aa3.63□□□□□ -1.83
HSH49YOR319W SYO1Q07395 620 aa3.63□□□□□ -1.83
HSH49YOR319W RTC5Q12108 567 aaKnown RBP3.63□□□□□ -1.83
HSH49YOR319W ATG34Q12292 412 aa3.63□□□□□ -1.83
HSH49YOR319W CDC21P06785 304 aa3.62□□□□□ -1.83
HSH49YOR319W NFT1P0CE68 1218 aa3.62□□□□□ -1.83
HSH49YOR319W YAR066WP0CX18 203 aa3.62□□□□□ -1.83
HSH49YOR319W YHR214WP0CX19 203 aa3.62□□□□□ -1.83
HSH49YOR319W SCH9P11792 824 aaKnown RBP3.62□□□□□ -1.83
HSH49YOR319W CTR86P25355 563 aa3.62□□□□□ -1.83
HSH49YOR319W CYS4P32582 507 aaKnown RBP3.62□□□□□ -1.83
HSH49YOR319W SUR1P33300 382 aa3.62□□□□□ -1.83
HSH49YOR319W RSM22P36056 628 aa3.62□□□□□ -1.83
HSH49YOR319W YCR041WP37265 110 aa3.62□□□□□ -1.83
HSH49YOR319W RIM2P38127 377 aa3.62□□□□□ -1.83
HSH49YOR319W KAP104P38217 918 aaKnown RBP3.62□□□□□ -1.83
HSH49YOR319W QDR3P38227 689 aa3.62□□□□□ -1.83
HSH49YOR319W MNL1P38888 796 aa3.62□□□□□ -1.83
HSH49YOR319W VPS52P39904 641 aa3.62□□□□□ -1.83
HSH49YOR319W ISC1P40015 477 aaKnown RBP3.62□□□□□ -1.83
HSH49YOR319W MEP1P40260 492 aa3.62□□□□□ -1.83
HSH49YOR319W YIR014WP40570 242 aa3.62□□□□□ -1.83
HSH49YOR319W HMS2P47175 358 aa3.62□□□□□ -1.83
HSH49YOR319W PRO2P54885 456 aaKnown RBP3.62□□□□□ -1.83
HSH49YOR319W UTP6Q02354 440 aaKnown RBP3.62□□□□□ -1.83
HSH49YOR319W YDR415CQ04033 374 aaPredicted RBP3.62□□□□□ -1.83
HSH49YOR319W RBA50Q04418 439 aa3.62□□□□□ -1.83
HSH49YOR319W YLR281CQ05863 155 aa3.62□□□□□ -1.83
HSH49YOR319W NOP6Q07623 225 aaKnown RBP3.62□□□□□ -1.83
HSH49YOR319W MLH2Q07980 695 aa3.62□□□□□ -1.83
HSH49YOR319W DSE3Q08729 430 aa3.62□□□□□ -1.83
HSH49YOR319W CRM1P30822 1084 aaKnown RBP3.61□□□□□ -1.83
HSH49YOR319W FRE2P36033 711 aa3.61□□□□□ -1.83
HSH49YOR319W YBL028CP38202 106 aa3.61□□□□□ -1.83
HSH49YOR319W RTT107P38850 1070 aa3.61□□□□□ -1.83
HSH49YOR319W YAT2P40017 923 aa3.61□□□□□ -1.83
HSH49YOR319W AZF1P41696 914 aa3.61□□□□□ -1.83
HSH49YOR319W MPP10P47083 593 aaKnown RBP3.61□□□□□ -1.83
HSH49YOR319W PRM1P53835 661 aa3.61□□□□□ -1.83
HSH49YOR319W AAD15Q08361 143 aa3.61□□□□□ -1.83
HSH49YOR319W SKI7Q08491 747 aaPredicted RBP3.61□□□□□ -1.83
HSH49YOR319W SFG1Q12507 346 aa3.61□□□□□ -1.83
HSH49YOR319W DST1P07273 309 aa3.6□□□□□ -1.83
HSH49YOR319W IMA3P0CW40 589 aa3.6□□□□□ -1.83
HSH49YOR319W IMA4P0CW41 589 aa3.6□□□□□ -1.83
HSH49YOR319W PRP16P15938 1071 aaPredicted RBP3.6□□□□□ -1.83
HSH49YOR319W YSC83P32792 385 aa3.6□□□□□ -1.83
HSH49YOR319W SIP2P34164 415 aaKnown RBP3.6□□□□□ -1.83
HSH49YOR319W PCH2P38126 564 aa3.6□□□□□ -1.83
HSH49YOR319W MSG5P38590 489 aa3.6□□□□□ -1.83
HSH49YOR319W LYS1P38998 373 aaRIP-Chip data3.6□□□□□ -1.83not detected
HSH49YOR319W PCL7P40186 285 aa3.6□□□□□ -1.83
HSH49YOR319W YIL152WP40455 235 aa3.6□□□□□ -1.83
HSH49YOR319W GWT1P47026 490 aa3.6□□□□□ -1.83
HSH49YOR319W RLI1Q03195 608 aaKnown RBP3.6□□□□□ -1.83
HSH49YOR319W MMT1Q03218 510 aa3.6□□□□□ -1.83
HSH49YOR319W IMA2Q08295 589 aa3.6□□□□□ -1.83
HSH49YOR319W MDY2Q12285 212 aa3.6□□□□□ -1.83
HSH49YOR319W ARG4P04076 463 aaPredicted RBP3.59□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 274 ms