RNA–Protein interactions for RNA: YML112W

CTK3, Transcript of Gamma subunit of C-terminal domain kinase I, yeastyeast

Gene CTK3, Length 891 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTK3YML112W RIP1P08067 215 aa2.28□□□□□ -2.04
CTK3YML112W SEC63P14906 663 aa2.28□□□□□ -2.04
CTK3YML112W CLC1P17891 233 aa2.28□□□□□ -2.04
CTK3YML112W POP5P28005 173 aa2.28□□□□□ -2.04
CTK3YML112W KAR9P32526 644 aa2.28□□□□□ -2.04
CTK3YML112W ARA1P38115 344 aa2.28□□□□□ -2.04
CTK3YML112W YJR011CP47086 261 aaPredicted RBP2.28□□□□□ -2.04
CTK3YML112W HMS2P47175 358 aa2.28□□□□□ -2.04
CTK3YML112W FMS1P50264 508 aa2.28□□□□□ -2.04
CTK3YML112W SYF1Q04048 859 aaPredicted RBP2.28□□□□□ -2.04
CTK3YML112W MED1Q12321 566 aa2.28□□□□□ -2.04
CTK3YML112W YRM1Q12340 786 aa2.28□□□□□ -2.04
CTK3YML112W RPL3P14126 387 aaKnown RBP2.27□□□□□ -2.05
CTK3YML112W CLN1P20437 546 aa2.27□□□□□ -2.05
CTK3YML112W HXT3P32466 567 aaKnown RBP2.27□□□□□ -2.05
CTK3YML112W NUP2P32499 720 aa2.27□□□□□ -2.05
CTK3YML112W CSE2P33308 149 aa2.27□□□□□ -2.05
CTK3YML112W SMF1P38925 575 aa2.27□□□□□ -2.05
CTK3YML112W BET5Q03630 159 aa2.27□□□□□ -2.05
CTK3YML112W CUE5Q08412 411 aaKnown RBP2.27□□□□□ -2.05
CTK3YML112W GRX6Q12438 231 aa2.27□□□□□ -2.05
CTK3YML112W RTP1Q12751 981 aa2.27□□□□□ -2.05
CTK3YML112W MET17P06106 444 aa2.26□□□□□ -2.05
CTK3YML112W NAM2P11325 894 aa2.26□□□□□ -2.05
CTK3YML112W NPL6P32832 435 aa2.26□□□□□ -2.05
CTK3YML112W MID2P36027 376 aa2.26□□□□□ -2.05
CTK3YML112W RFC3P38629 340 aa2.26□□□□□ -2.05
CTK3YML112W UTP18P40362 594 aaPredicted RBP2.26□□□□□ -2.05
CTK3YML112W GAB1P41733 394 aa2.26□□□□□ -2.05
CTK3YML112W ALF1P53904 254 aa2.26□□□□□ -2.05
CTK3YML112W NDE2Q07500 545 aa2.26□□□□□ -2.05
CTK3YML112W YDL121CQ07541 149 aa2.26□□□□□ -2.05
CTK3YML112W SIL1Q08199 421 aa2.26□□□□□ -2.05
CTK3YML112W SKI7Q08491 747 aaPredicted RBP2.26□□□□□ -2.05
CTK3YML112W RMD5Q12508 421 aa2.26□□□□□ -2.05
CTK3YML112W CKA1P15790 372 aa2.25□□□□□ -2.05
CTK3YML112W CLB3P24870 427 aa2.25□□□□□ -2.05
CTK3YML112W SIN4P32259 974 aa2.25□□□□□ -2.05
CTK3YML112W NTC20P38302 140 aaPredicted RBP2.25□□□□□ -2.05
CTK3YML112W PCF11P39081 626 aaPredicted RBP2.25□□□□□ -2.05
CTK3YML112W YJR085CP47131 105 aaKnown RBP2.25□□□□□ -2.05
CTK3YML112W AZR1P50080 613 aa2.25□□□□□ -2.05
CTK3YML112W GIP3Q03016 1276 aa2.25□□□□□ -2.05
CTK3YML112W RRP45Q05636 305 aaKnown RBP2.25□□□□□ -2.05
CTK3YML112W TSR2Q06672 205 aaKnown RBP2.25□□□□□ -2.05
CTK3YML112W PLP2Q12017 286 aa2.25□□□□□ -2.05
CTK3YML112W ILV5P06168 395 aaKnown RBP2.24□□□□□ -2.05
CTK3YML112W REC107P21651 314 aa2.24□□□□□ -2.05
CTK3YML112W CTR86P25355 563 aa2.24□□□□□ -2.05
CTK3YML112W AIM10P39965 576 aaKnown RBP2.24□□□□□ -2.05
CTK3YML112W JLP2P40206 208 aa2.24□□□□□ -2.05
CTK3YML112W RPS0BP46654 252 aaKnown RBP2.24□□□□□ -2.05
CTK3YML112W MDE1P47095 244 aa2.24□□□□□ -2.05
CTK3YML112W RHO5P53879 331 aaKnown RBP2.24□□□□□ -2.05
CTK3YML112W MTQ1P53944 314 aa2.24□□□□□ -2.05
CTK3YML112W ADA2Q02336 434 aa2.24□□□□□ -2.05
CTK3YML112W DLD2P46681 530 aaKnown RBP2.23□□□□□ -2.05
CTK3YML112W PHB2P50085 310 aa2.23□□□□□ -2.05
CTK3YML112W MRPL19P53875 158 aa2.23□□□□□ -2.05
CTK3YML112W RNY1Q02933 434 aaKnown RBP2.23□□□□□ -2.05
CTK3YML112W MDM30Q05930 598 aa2.23□□□□□ -2.05
CTK3YML112W RRI2Q12348 645 aa2.23□□□□□ -2.05
CTK3YML112W AHC1Q12433 566 aa2.23□□□□□ -2.05
CTK3YML112W IZH2Q12442 317 aa2.23□□□□□ -2.05
CTK3YML112W HOM3P10869 527 aa2.22□□□□□ -2.05
CTK3YML112W SPO12P17123 173 aa2.22□□□□□ -2.05
CTK3YML112W ROX1P25042 368 aa2.22□□□□□ -2.05
CTK3YML112W RAD57P25301 460 aa2.22□□□□□ -2.05
CTK3YML112W RHB1P25378 209 aa2.22□□□□□ -2.05
CTK3YML112W KRE2P27809 442 aa2.22□□□□□ -2.05
CTK3YML112W RML2P32611 393 aa2.22□□□□□ -2.05
CTK3YML112W NOC2P39744 710 aaKnown RBP2.22□□□□□ -2.05
CTK3YML112W MIG3P39943 394 aa2.22□□□□□ -2.05
CTK3YML112W IRC6P43615 237 aa2.22□□□□□ -2.05
CTK3YML112W RPA49Q01080 415 aaPredicted RBP2.22□□□□□ -2.05
CTK3YML112W NUP116Q02630 1113 aa2.22□□□□□ -2.05
CTK3YML112W BCH1Q05029 724 aa2.22□□□□□ -2.05
CTK3YML112W SMY1P32364 656 aaKnown RBP2.21□□□□□ -2.06
CTK3YML112W YBR056WP38081 501 aa2.21□□□□□ -2.06
CTK3YML112W MMS4P38257 691 aa2.21□□□□□ -2.06
CTK3YML112W DFG10P40526 253 aa2.21□□□□□ -2.06
CTK3YML112W YIL029CP40538 142 aa2.21□□□□□ -2.06
CTK3YML112W SFH5P47008 294 aa2.21□□□□□ -2.06
CTK3YML112W YGL138CP53122 345 aa2.21□□□□□ -2.06
CTK3YML112W GPI15P53961 229 aa2.21□□□□□ -2.06
CTK3YML112W OAZ1Q02803 292 aa2.21□□□□□ -2.06
CTK3YML112W JID1Q12350 301 aa2.21□□□□□ -2.06
CTK3YML112W RED1P14291 827 aa2.2□□□□□ -2.06
CTK3YML112W GEX1P25596 615 aa2.2□□□□□ -2.06
CTK3YML112W BEM1P29366 551 aa2.2□□□□□ -2.06
CTK3YML112W SOR1P35497 357 aaKnown RBP2.2□□□□□ -2.06
CTK3YML112W APE3P37302 537 aaKnown RBP2.2□□□□□ -2.06
CTK3YML112W YAL037WP39728 267 aa2.2□□□□□ -2.06
CTK3YML112W COS5P47187 383 aa2.2□□□□□ -2.06
CTK3YML112W SUB1P54000 292 aaKnown RBP2.2□□□□□ -2.06
CTK3YML112W TAF12Q03761 539 aa2.2□□□□□ -2.06
CTK3YML112W SOR2Q07786 357 aa2.2□□□□□ -2.06
CTK3YML112W COS7Q07788 383 aa2.2□□□□□ -2.06
CTK3YML112W DIS3Q08162 1001 aaKnown RBP2.2□□□□□ -2.06
CTK3YML112W RKM1Q08961 583 aaPredicted RBP2.2□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 21.3 ms