RNA–Protein interactions for RNA: YLR408C

BLS1, Transcript of Subunit of the BLOC-1 complex involved in endosomal maturation, yeast

Gene BLS1, Length 369 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
BLS1	YLR408C	YMR181C	Q03231	154 aa		4.22	□□□□□ -1.73
BLS1	YLR408C	YMR130W	Q04223	302 aa		4.22	□□□□□ -1.73
BLS1	YLR408C	MMR1	Q06324	491 aa		4.22	□□□□□ -1.73
BLS1	YLR408C	BUG1	Q12191	341 aa		4.22	□□□□□ -1.73
BLS1	YLR408C	ARG4	P04076	463 aa	Predicted RBP	4.21	□□□□□ -1.74
BLS1	YLR408C	ILV5	P06168	395 aa	Known RBP	4.21	□□□□□ -1.74
BLS1	YLR408C	URA4	P20051	364 aa		4.21	□□□□□ -1.74
BLS1	YLR408C	CLN1	P20437	546 aa		4.21	□□□□□ -1.74
BLS1	YLR408C	DBF4	P32325	704 aa		4.21	□□□□□ -1.74
BLS1	YLR408C	TFB1	P32776	642 aa		4.21	□□□□□ -1.74
BLS1	YLR408C	RIB5	P38145	238 aa		4.21	□□□□□ -1.74
BLS1	YLR408C	RFS1	P38234	210 aa	Known RBP	4.21	□□□□□ -1.74
BLS1	YLR408C	RRT2	P38332	387 aa		4.21	□□□□□ -1.74
BLS1	YLR408C	SPG5	P42933	373 aa		4.21	□□□□□ -1.74
BLS1	YLR408C	YFL067W	P43537	175 aa		4.21	□□□□□ -1.74
BLS1	YLR408C	LAM5	P43560	674 aa		4.21	□□□□□ -1.74
BLS1	YLR408C	PHO86	P46956	311 aa		4.21	□□□□□ -1.74
BLS1	YLR408C	YGL242C	P53066	181 aa		4.21	□□□□□ -1.74
BLS1	YLR408C	HXT11	P54862	567 aa		4.21	□□□□□ -1.74
BLS1	YLR408C	DIS3	Q08162	1001 aa	Known RBP	4.21	□□□□□ -1.74
BLS1	YLR408C	REX4	Q08237	289 aa		4.21	□□□□□ -1.74
BLS1	YLR408C	MED2	Q12124	431 aa		4.21	□□□□□ -1.74
BLS1	YLR408C	YLR108C	Q12259	485 aa		4.21	□□□□□ -1.74
BLS1	YLR408C	TEF1	P02994	458 aa	Known RBP	4.2	□□□□□ -1.74
BLS1	YLR408C	MMS4	P38257	691 aa		4.2	□□□□□ -1.74
BLS1	YLR408C	YIL067C	P40514	678 aa		4.2	□□□□□ -1.74
BLS1	YLR408C	HMS2	P47175	358 aa		4.2	□□□□□ -1.74
BLS1	YLR408C	YML6	P51998	286 aa		4.2	□□□□□ -1.74
BLS1	YLR408C	GOR1	P53839	350 aa		4.2	□□□□□ -1.74
BLS1	YLR408C	GPI15	P53961	229 aa		4.2	□□□□□ -1.74
BLS1	YLR408C	DCS1	Q06151	350 aa		4.2	□□□□□ -1.74
BLS1	YLR408C	RSA1	Q08932	381 aa		4.2	□□□□□ -1.74
BLS1	YLR408C	CPR4	P25334	318 aa		4.19	□□□□□ -1.74
BLS1	YLR408C	SDH3	P33421	198 aa		4.19	□□□□□ -1.74
BLS1	YLR408C	YBR137W	P38276	179 aa		4.19	□□□□□ -1.74
BLS1	YLR408C	REE1	P40893	198 aa		4.19	□□□□□ -1.74
BLS1	YLR408C	ZIM17	P42844	174 aa		4.19	□□□□□ -1.74
BLS1	YLR408C	ELP3	Q02908	557 aa	Known RBP	4.19	□□□□□ -1.74
BLS1	YLR408C	RSN1	Q03516	953 aa		4.19	□□□□□ -1.74
BLS1	YLR408C	PBA1	Q05778	276 aa		4.19	□□□□□ -1.74
BLS1	YLR408C	YOR387C	Q08910	206 aa		4.19	□□□□□ -1.74
BLS1	YLR408C	ISA2	Q12425	185 aa		4.19	□□□□□ -1.74
BLS1	YLR408C	COX3	P00420	269 aa		4.18	□□□□□ -1.74
BLS1	YLR408C	HHF1	P02309	103 aa	Known RBP	4.18	□□□□□ -1.74
BLS1	YLR408C	YBL059W	P34224	193 aa		4.18	□□□□□ -1.74
BLS1	YLR408C	RRN10	P38204	145 aa		4.18	□□□□□ -1.74
BLS1	YLR408C	PCF11	P39081	626 aa	Predicted RBP	4.18	□□□□□ -1.74
BLS1	YLR408C	RPN9	Q04062	393 aa	Known RBP	4.18	□□□□□ -1.74
BLS1	YLR408C	URH1	Q04179	340 aa		4.18	□□□□□ -1.74
BLS1	YLR408C	TY1B-A	O13527	1196 aa	Known RBP	4.17	□□□□□ -1.74
BLS1	YLR408C	ADE4	P04046	510 aa	Known RBP	4.17	□□□□□ -1.74
BLS1	YLR408C	MDH1	P17505	334 aa	Known RBP RIP-Chip data	4.17	□□□□□ -1.74	not detected
BLS1	YLR408C	VMA8	P32610	256 aa	Known RBP	4.17	□□□□□ -1.74
BLS1	YLR408C	PAD1	P33751	242 aa	Known RBP RIP-Chip data	4.17	□□□□□ -1.74	not detected
BLS1	YLR408C	SER3	P40054	469 aa		4.17	□□□□□ -1.74
BLS1	YLR408C	BTN2	P53286	410 aa		4.17	□□□□□ -1.74
BLS1	YLR408C	TOF1	P53840	1238 aa		4.17	□□□□□ -1.74
BLS1	YLR408C	GIP3	Q03016	1276 aa		4.17	□□□□□ -1.74
BLS1	YLR408C	BET5	Q03630	159 aa		4.17	□□□□□ -1.74
BLS1	YLR408C	AIM32	Q04689	311 aa		4.17	□□□□□ -1.74
BLS1	YLR408C	SMC6	Q12749	1114 aa		4.17	□□□□□ -1.74
BLS1	YLR408C	MTR10	Q99189	972 aa		4.17	□□□□□ -1.74
BLS1	YLR408C	SUP35	P05453	685 aa	Known RBP	4.16	□□□□□ -1.74
BLS1	YLR408C	ARO3	P14843	370 aa	Known RBP	4.16	□□□□□ -1.74
BLS1	YLR408C	SPO12	P17123	173 aa		4.16	□□□□□ -1.74
BLS1	YLR408C	SPO7	P18410	259 aa		4.16	□□□□□ -1.74
BLS1	YLR408C	SLY1	P22213	666 aa		4.16	□□□□□ -1.74
BLS1	YLR408C	NAM9	P27929	486 aa		4.16	□□□□□ -1.74
BLS1	YLR408C	ARO2	P28777	376 aa	Known RBP	4.16	□□□□□ -1.74
BLS1	YLR408C	DEG1	P31115	442 aa	Known RBP	4.16	□□□□□ -1.74
BLS1	YLR408C	YOX1	P34161	385 aa		4.16	□□□□□ -1.74
BLS1	YLR408C	KKQ8	P36004	724 aa		4.16	□□□□□ -1.74
BLS1	YLR408C	SRP72	P38688	640 aa	Known RBP	4.16	□□□□□ -1.74
BLS1	YLR408C	VHS2	P40463	436 aa		4.16	□□□□□ -1.74
BLS1	YLR408C	PRM5	P40476	318 aa		4.16	□□□□□ -1.74
BLS1	YLR408C	YPS6	P40583	537 aa		4.16	□□□□□ -1.74
BLS1	YLR408C	GIS2	P53849	153 aa	Known RBP RIP-Chip data	4.16	□□□□□ -1.74	not detected
BLS1	YLR408C	OCA2	P53949	197 aa		4.16	□□□□□ -1.74
BLS1	YLR408C	PPM1	Q04081	328 aa		4.16	□□□□□ -1.74
BLS1	YLR408C	UAF30	Q08747	228 aa		4.16	□□□□□ -1.74
BLS1	YLR408C	SRL2	Q12020	392 aa		4.16	□□□□□ -1.74
BLS1	YLR408C	TMS1	Q12116	473 aa		4.16	□□□□□ -1.74
BLS1	YLR408C	ATG34	Q12292	412 aa		4.16	□□□□□ -1.74
BLS1	YLR408C	ERP4	Q12450	207 aa		4.16	□□□□□ -1.74
BLS1	YLR408C	SWH1	P35845	1188 aa		4.15	□□□□□ -1.75
BLS1	YLR408C	RRP4	P38792	359 aa	Known RBP	4.15	□□□□□ -1.75
BLS1	YLR408C	NDT80	P38830	627 aa		4.15	□□□□□ -1.75
BLS1	YLR408C	MTC6	P38849	526 aa		4.15	□□□□□ -1.75
BLS1	YLR408C	YGR210C	P42942	411 aa		4.15	□□□□□ -1.75
BLS1	YLR408C	YGR111W	P53265	400 aa		4.15	□□□□□ -1.75
BLS1	YLR408C	MTM1	P53320	366 aa		4.15	□□□□□ -1.75
BLS1	YLR408C	HEL2	Q05580	639 aa	Known RBP	4.15	□□□□□ -1.75
BLS1	YLR408C	SNT309	Q06091	175 aa	Predicted RBP	4.15	□□□□□ -1.75
BLS1	YLR408C	TSR1	Q07381	788 aa	Known RBP	4.15	□□□□□ -1.75
BLS1	YLR408C	VPS54	Q12071	889 aa		4.15	□□□□□ -1.75
BLS1	YLR408C	ASC1	P38011	319 aa	Known RBP	4.14	□□□□□ -1.75
BLS1	YLR408C	BUD27	P43573	796 aa	Known RBP RIP-Chip data	4.14	□□□□□ -1.75	not detected
BLS1	YLR408C	HER2	Q03557	464 aa		4.14	□□□□□ -1.75
BLS1	YLR408C	PRP42	Q03776	544 aa	Known RBP	4.14	□□□□□ -1.75
BLS1	YLR408C	SNX3	Q08826	162 aa	Known RBP	4.14	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 22.7 ms