RNA–Protein interactions for RNA: YLR396C

VPS33, Transcript of ATP-binding protein that is a subunit of the HOPS and CORVET complexes, yeastyeast

Gene VPS33, Length 2,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS33YLR396C GET4Q12125 312 aa3.28□□□□□ -1.89
VPS33YLR396C BSC1Q12140 328 aa3.28□□□□□ -1.89
VPS33YLR396C RSR1P13856 272 aa3.27□□□□□ -1.89
VPS33YLR396C YAK1P14680 807 aa3.27□□□□□ -1.89
VPS33YLR396C VMA2P16140 517 aaKnown RBP3.27□□□□□ -1.89
VPS33YLR396C UBA1P22515 1024 aaKnown RBP3.27□□□□□ -1.89
VPS33YLR396C ITR2P30606 609 aa3.27□□□□□ -1.89
VPS33YLR396C SNC1P31109 117 aa3.27□□□□□ -1.89
VPS33YLR396C YKR015CP36111 568 aa3.27□□□□□ -1.89
VPS33YLR396C SPC34P36131 295 aa3.27□□□□□ -1.89
VPS33YLR396C ROT2P38138 954 aa3.27□□□□□ -1.89
VPS33YLR396C VMA22P38784 181 aa3.27□□□□□ -1.89
VPS33YLR396C JEM1P40358 645 aa3.27□□□□□ -1.89
VPS33YLR396C MET28P40573 187 aa3.27□□□□□ -1.89
VPS33YLR396C YVH1Q02256 364 aaKnown RBP3.27□□□□□ -1.89
VPS33YLR396C SMA1Q02651 245 aa3.27□□□□□ -1.89
VPS33YLR396C RCF1Q03713 159 aa3.27□□□□□ -1.89
VPS33YLR396C YDR341CQ05506 607 aaKnown RBP3.27□□□□□ -1.89
VPS33YLR396C DON1Q05610 365 aa3.27□□□□□ -1.89
VPS33YLR396C RPN8Q08723 338 aaKnown RBP3.27□□□□□ -1.89
VPS33YLR396C TAH18Q12181 623 aa3.27□□□□□ -1.89
VPS33YLR396C RIO1Q12196 484 aaKnown RBP3.27□□□□□ -1.89
VPS33YLR396C RLM1Q12224 676 aa3.27□□□□□ -1.89
VPS33YLR396C ARG3P05150 338 aa3.26□□□□□ -1.89
VPS33YLR396C HIS3P06633 220 aa3.26□□□□□ -1.89
VPS33YLR396C CDC31P06704 161 aaKnown RBP3.26□□□□□ -1.89
VPS33YLR396C OSM1P21375 501 aaKnown RBP3.26□□□□□ -1.89
VPS33YLR396C RPS2P25443 254 aaKnown RBP3.26□□□□□ -1.89
VPS33YLR396C WBP1P33767 430 aaKnown RBP3.26□□□□□ -1.89
VPS33YLR396C PHD1P36093 366 aa3.26□□□□□ -1.89
VPS33YLR396C JNM1P36224 373 aa3.26□□□□□ -1.89
VPS33YLR396C ERG7P38604 731 aa3.26□□□□□ -1.89
VPS33YLR396C STN1P38960 494 aa3.26□□□□□ -1.89
VPS33YLR396C MET30P39014 640 aa3.26□□□□□ -1.89
VPS33YLR396C PCF11P39081 626 aaPredicted RBP3.26□□□□□ -1.89
VPS33YLR396C YIL169CP40442 995 aa3.26□□□□□ -1.89
VPS33YLR396C HOP2P53187 214 aa3.26□□□□□ -1.89
VPS33YLR396C YMR160WQ03823 816 aa3.26□□□□□ -1.89
VPS33YLR396C FIN1Q03898 291 aa3.26□□□□□ -1.89
VPS33YLR396C COQ9Q05779 260 aa3.26□□□□□ -1.89
VPS33YLR396C DAS2Q12084 232 aa3.26□□□□□ -1.89
VPS33YLR396C RUP1Q12242 671 aa3.26□□□□□ -1.89
VPS33YLR396C AVL9Q12500 764 aa3.26□□□□□ -1.89
VPS33YLR396C GAL80P04387 435 aa3.26□□□□□ -1.89
VPS33YLR396C SEC63P14906 663 aa3.26□□□□□ -1.89
VPS33YLR396C PDA1P16387 420 aaKnown RBP3.26□□□□□ -1.89
VPS33YLR396C OPI1P21957 404 aa3.26□□□□□ -1.89
VPS33YLR396C SGV1P23293 657 aaKnown RBP3.26□□□□□ -1.89
VPS33YLR396C ELO2P25358 347 aa3.26□□□□□ -1.89
VPS33YLR396C GYP6P32806 458 aa3.26□□□□□ -1.89
VPS33YLR396C YBR032WP38223 100 aa3.26□□□□□ -1.89
VPS33YLR396C RFC3P38629 340 aa3.26□□□□□ -1.89
VPS33YLR396C LAG1P38703 411 aa3.26□□□□□ -1.89
VPS33YLR396C NPT1P39683 429 aaKnown RBP3.26□□□□□ -1.89
VPS33YLR396C FMP33P46998 180 aa3.26□□□□□ -1.89
VPS33YLR396C RPC17P47076 161 aa3.26□□□□□ -1.89
VPS33YLR396C KAP114P53067 1004 aa3.26□□□□□ -1.89
VPS33YLR396C YGR266WP53326 701 aa3.26□□□□□ -1.89
VPS33YLR396C SMM1P53720 384 aaKnown RBP3.26□□□□□ -1.89
VPS33YLR396C COA4Q05809 96 aa3.26□□□□□ -1.89
VPS33YLR396C YLR281CQ05863 155 aa3.26□□□□□ -1.89
VPS33YLR396C SSK1Q07084 712 aa3.26□□□□□ -1.89
VPS33YLR396C SCM3Q12334 223 aa3.26□□□□□ -1.89
VPS33YLR396C BBP1Q12365 385 aa3.26□□□□□ -1.89
VPS33YLR396C REP1P03871 373 aa3.25□□□□□ -1.89
VPS33YLR396C GCN3P14741 305 aa3.25□□□□□ -1.89
VPS33YLR396C HNM1P19807 563 aa3.25□□□□□ -1.89
VPS33YLR396C URA4P20051 364 aa3.25□□□□□ -1.89
VPS33YLR396C KDX1P36005 433 aa3.25□□□□□ -1.89
VPS33YLR396C RCN1P36054 211 aa3.25□□□□□ -1.89
VPS33YLR396C YND1P40009 630 aa3.25□□□□□ -1.89
VPS33YLR396C YMR147WP40218 223 aaKnown RBP3.25□□□□□ -1.89
VPS33YLR396C SNG1P46950 547 aa3.25□□□□□ -1.89
VPS33YLR396C DRN1P53255 507 aaKnown RBP3.25□□□□□ -1.89
VPS33YLR396C YGR126WP53274 230 aa3.25□□□□□ -1.89
VPS33YLR396C OSH6Q02201 448 aa3.25□□□□□ -1.89
VPS33YLR396C YPL014WQ02606 381 aa3.25□□□□□ -1.89
VPS33YLR396C NUP53Q03790 475 aa3.25□□□□□ -1.89
VPS33YLR396C TAF11Q04226 346 aa3.25□□□□□ -1.89
VPS33YLR396C DIC1Q06143 298 aa3.25□□□□□ -1.89
VPS33YLR396C BRR1Q99177 341 aaPredicted RBP3.25□□□□□ -1.89
VPS33YLR396C SEY1Q99287 776 aa3.25□□□□□ -1.89
VPS33YLR396C FAS2P19097 1887 aaKnown RBP3.25□□□□□ -1.89
VPS33YLR396C HIS4P00815 799 aaKnown RBP3.24□□□□□ -1.89
VPS33YLR396C INH1P01097 85 aa3.24□□□□□ -1.89
VPS33YLR396C MSS116P15424 664 aaKnown RBP3.24□□□□□ -1.89
VPS33YLR396C YME1P32795 747 aa3.24□□□□□ -1.89
VPS33YLR396C YBR242WP38331 238 aa3.24□□□□□ -1.89
VPS33YLR396C DOT5P40553 215 aa3.24□□□□□ -1.89
VPS33YLR396C ARF3P40994 183 aaRIP-Chip data3.24□□□□□ -1.89not detected
VPS33YLR396C ROK1P45818 564 aaPredicted RBP3.24□□□□□ -1.89
VPS33YLR396C GUF1P46943 645 aa3.24□□□□□ -1.89
VPS33YLR396C ATP22P50273 684 aaPredicted RBP3.24□□□□□ -1.89
VPS33YLR396C MRM2P53123 320 aa3.24□□□□□ -1.89
VPS33YLR396C YGR016WP53209 190 aa3.24□□□□□ -1.89
VPS33YLR396C DUG3P53871 357 aa3.24□□□□□ -1.89
VPS33YLR396C MRPL19P53875 158 aa3.24□□□□□ -1.89
VPS33YLR396C RHO4Q00246 291 aa3.24□□□□□ -1.89
VPS33YLR396C MMT1Q03218 510 aa3.24□□□□□ -1.89
VPS33YLR396C ACL4Q03771 387 aa3.24□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 33.6 ms