RNA–Protein interactions for RNA: YKR072C

SIS2, Transcript of Negative regulatory subunit of protein phosphatase 1 (Ppz1p), yeast

Gene SIS2, Length 1,689 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SIS2	YKR072C	ADE17	P38009	592 aa	Known RBP	4.8	□□□□□ -1.64
SIS2	YKR072C	VBA2	P38358	474 aa	Known RBP	4.8	□□□□□ -1.64
SIS2	YKR072C	YHR182W	P38870	785 aa		4.8	□□□□□ -1.64
SIS2	YKR072C	PCF11	P39081	626 aa	Predicted RBP	4.8	□□□□□ -1.64
SIS2	YKR072C	BNA3	P47039	444 aa	Known RBP	4.8	□□□□□ -1.64
SIS2	YKR072C	JJJ3	P47138	172 aa		4.8	□□□□□ -1.64
SIS2	YKR072C	YIP4	P53093	235 aa		4.8	□□□□□ -1.64
SIS2	YKR072C	YNL092W	P53934	400 aa		4.8	□□□□□ -1.64
SIS2	YKR072C	APM1	Q00776	475 aa	Predicted RBP	4.8	□□□□□ -1.64
SIS2	YKR072C	TAF12	Q03761	539 aa		4.8	□□□□□ -1.64
SIS2	YKR072C	EMI2	Q04409	500 aa	Known RBP	4.8	□□□□□ -1.64
SIS2	YKR072C	CTS2	Q06350	511 aa		4.8	□□□□□ -1.64
SIS2	YKR072C	SYO1	Q07395	620 aa		4.8	□□□□□ -1.64
SIS2	YKR072C	YDL086W	Q07505	273 aa		4.8	□□□□□ -1.64
SIS2	YKR072C	YOL159C	Q08300	171 aa		4.8	□□□□□ -1.64
SIS2	YKR072C	GEP3	Q08622	556 aa		4.8	□□□□□ -1.64
SIS2	YKR072C	LCB4	Q12246	624 aa		4.8	□□□□□ -1.64
SIS2	YKR072C	GLE1	Q12315	538 aa		4.8	□□□□□ -1.64
SIS2	YKR072C	LPX1	Q12405	387 aa	Known RBP	4.8	□□□□□ -1.64
SIS2	YKR072C	RMD5	Q12508	421 aa		4.8	□□□□□ -1.64
SIS2	YKR072C	CMC2	Q3E7A4	109 aa		4.8	□□□□□ -1.64
SIS2	YKR072C	PAN1	P32521	1480 aa		4.8	□□□□□ -1.64
SIS2	YKR072C	KAR4	P25583	335 aa		4.8	□□□□□ -1.64
SIS2	YKR072C	GSY2	P27472	705 aa		4.8	□□□□□ -1.64
SIS2	YKR072C	SKG6	P32900	734 aa	Predicted RBP	4.8	□□□□□ -1.64
SIS2	YKR072C	OCT1	P35999	772 aa		4.8	□□□□□ -1.64
SIS2	YKR072C	MAL32	P38158	584 aa		4.8	□□□□□ -1.64
SIS2	YKR072C	RRN10	P38204	145 aa		4.8	□□□□□ -1.64
SIS2	YKR072C	QDR3	P38227	689 aa		4.8	□□□□□ -1.64
SIS2	YKR072C	RTC2	P38279	296 aa		4.8	□□□□□ -1.64
SIS2	YKR072C	YHR122W	P38829	231 aa		4.8	□□□□□ -1.64
SIS2	YKR072C	SNL1	P40548	159 aa		4.8	□□□□□ -1.64
SIS2	YKR072C	UBC11	P52492	156 aa		4.8	□□□□□ -1.64
SIS2	YKR072C	VPS62	P53285	467 aa		4.8	□□□□□ -1.64
SIS2	YKR072C	MAL12	P53341	584 aa		4.8	□□□□□ -1.64
SIS2	YKR072C	RET3	P53600	189 aa		4.8	□□□□□ -1.64
SIS2	YKR072C	URH1	Q04179	340 aa		4.8	□□□□□ -1.64
SIS2	YKR072C	MDM30	Q05930	598 aa		4.8	□□□□□ -1.64
SIS2	YKR072C	GET4	Q12125	312 aa		4.8	□□□□□ -1.64
SIS2	YKR072C	LSP1	Q12230	341 aa	Known RBP	4.8	□□□□□ -1.64
SIS2	YKR072C	SPO24	Q3E752	67 aa		4.8	□□□□□ -1.64
SIS2	YKR072C	TY1B-H	O13535	1793 aa		4.8	□□□□□ -1.64
SIS2	YKR072C	TY1B-DR5	P0C2I2	1755 aa		4.8	□□□□□ -1.64
SIS2	YKR072C	TY1B-DR6	P0C2I3	1755 aa		4.8	□□□□□ -1.64
SIS2	YKR072C	TY1B-LR2	P0C2I5	1755 aa		4.8	□□□□□ -1.64
SIS2	YKR072C	TY1B-LR3	P0C2I6	1755 aa	Known RBP	4.8	□□□□□ -1.64
SIS2	YKR072C	TY1B-PR1	P0C2I9	1755 aa	Known RBP	4.8	□□□□□ -1.64
SIS2	YKR072C	TY1B-PR2	P0C2J0	1756 aa		4.8	□□□□□ -1.64
SIS2	YKR072C	TY1B-PR3	P0C2J1	1755 aa	Known RBP	4.8	□□□□□ -1.64
SIS2	YKR072C	TY1B-JR1	P47098	1755 aa		4.8	□□□□□ -1.64
SIS2	YKR072C	TY1B-ML2	Q03434	1755 aa	Known RBP	4.8	□□□□□ -1.64
SIS2	YKR072C	TY1B-ER1	Q03612	1755 aa		4.8	□□□□□ -1.64
SIS2	YKR072C	TY1B-ML1	Q04711	1755 aa	Known RBP	4.8	□□□□□ -1.64
SIS2	YKR072C	TY1B-GR2	Q12269	1755 aa		4.8	□□□□□ -1.64
SIS2	YKR072C	TY1B-OL	Q12273	1755 aa		4.8	□□□□□ -1.64
SIS2	YKR072C	TY1B-PL	Q12414	1755 aa	Known RBP	4.8	□□□□□ -1.64
SIS2	YKR072C	YPK2	P18961	677 aa		4.79	□□□□□ -1.64
SIS2	YKR072C	ITR1	P30605	584 aa		4.79	□□□□□ -1.64
SIS2	YKR072C	ZIP1	P31111	875 aa		4.79	□□□□□ -1.64
SIS2	YKR072C	REC114	P32841	428 aa		4.79	□□□□□ -1.64
SIS2	YKR072C	IMP3	P32899	183 aa	Predicted RBP	4.79	□□□□□ -1.64
SIS2	YKR072C	RPC34	P32910	317 aa		4.79	□□□□□ -1.64
SIS2	YKR072C	YPT10	P38146	199 aa		4.79	□□□□□ -1.64
SIS2	YKR072C	SAF1	P38352	637 aa		4.79	□□□□□ -1.64
SIS2	YKR072C	ACO2	P39533	789 aa		4.79	□□□□□ -1.64
SIS2	YKR072C	GAT2	P40209	560 aa		4.79	□□□□□ -1.64
SIS2	YKR072C	MUP1	P50276	574 aa		4.79	□□□□□ -1.64
SIS2	YKR072C	COG2	P53271	262 aa		4.79	□□□□□ -1.64
SIS2	YKR072C	DIP5	P53388	608 aa		4.79	□□□□□ -1.64
SIS2	YKR072C	SHR3	Q02774	210 aa		4.79	□□□□□ -1.64
SIS2	YKR072C	TRM13	Q12383	476 aa		4.79	□□□□□ -1.64
SIS2	YKR072C	ZPS1	Q12512	249 aa		4.79	□□□□□ -1.64
SIS2	YKR072C	RRP12	Q12754	1228 aa	Known RBP	4.79	□□□□□ -1.64
SIS2	YKR072C	YKL033W-A	Q86ZR7	236 aa		4.79	□□□□□ -1.64
SIS2	YKR072C	BRR1	Q99177	341 aa	Predicted RBP	4.79	□□□□□ -1.64
SIS2	YKR072C	YLL053C	P0CD98	152 aa		4.78	□□□□□ -1.64
SIS2	YKR072C	RPL18A	P0CX49	186 aa	Known RBP	4.78	□□□□□ -1.64
SIS2	YKR072C	RPL18B	P0CX50	186 aa	Known RBP	4.78	□□□□□ -1.64
SIS2	YKR072C	CWP1	P28319	239 aa		4.78	□□□□□ -1.64
SIS2	YKR072C	PRR1	P28708	518 aa		4.78	□□□□□ -1.64
SIS2	YKR072C	ATP11	P32453	318 aa		4.78	□□□□□ -1.64
SIS2	YKR072C	HXT1	P32465	570 aa		4.78	□□□□□ -1.64
SIS2	YKR072C	SHP1	P34223	423 aa		4.78	□□□□□ -1.64
SIS2	YKR072C	SPT10	P35208	640 aa		4.78	□□□□□ -1.64
SIS2	YKR072C	GMH1	P36125	273 aa		4.78	□□□□□ -1.64
SIS2	YKR072C	APL3	P38065	1025 aa		4.78	□□□□□ -1.64
SIS2	YKR072C	IML3	P38265	245 aa		4.78	□□□□□ -1.64
SIS2	YKR072C	HSH155	P49955	971 aa	Known RBP	4.78	□□□□□ -1.64
SIS2	YKR072C	NRD1	P53617	575 aa	Known RBP RIP-Chip data	4.78	□□□□□ -1.64	not detected
SIS2	YKR072C	YNR014W	P53719	212 aa		4.78	□□□□□ -1.64
SIS2	YKR072C	ERG5	P54781	538 aa		4.78	□□□□□ -1.64
SIS2	YKR072C	SLT2	Q00772	484 aa		4.78	□□□□□ -1.64
SIS2	YKR072C	RSM23	Q01163	450 aa		4.78	□□□□□ -1.64
SIS2	YKR072C	AAT1	Q01802	451 aa		4.78	□□□□□ -1.64
SIS2	YKR072C	RLI1	Q03195	608 aa	Known RBP	4.78	□□□□□ -1.64
SIS2	YKR072C	YMR178W	Q03219	274 aa	Known RBP	4.78	□□□□□ -1.64
SIS2	YKR072C	YLR283W	Q05867	314 aa		4.78	□□□□□ -1.64
SIS2	YKR072C	YDL057W	Q07379	328 aa		4.78	□□□□□ -1.64
SIS2	YKR072C	DNL4	Q08387	944 aa	Predicted RBP	4.78	□□□□□ -1.64
SIS2	YKR072C	ATG31	Q12421	196 aa		4.78	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 34.9 ms