RNA–Protein interactions for RNA: YJL029C

VPS53, Transcript of Component of the GARP (Golgi-associated retrograde protein) complex, yeastyeast

Gene VPS53, Length 2,469 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS53YJL029C DCG1P32460 244 aa3.37□□□□□ -1.87
VPS53YJL029C NIP1P32497 812 aaKnown RBP3.37□□□□□ -1.87
VPS53YJL029C IFA38P38286 347 aa3.37□□□□□ -1.87
VPS53YJL029C SCS2P40075 244 aaKnown RBP3.37□□□□□ -1.87
VPS53YJL029C VRG4P40107 337 aa3.37□□□□□ -1.87
VPS53YJL029C PFK26P40433 827 aaKnown RBP3.37□□□□□ -1.87
VPS53YJL029C COS4P43542 379 aa3.37□□□□□ -1.87
VPS53YJL029C AIM22P47051 409 aa3.37□□□□□ -1.87
VPS53YJL029C TRM9P49957 279 aa3.37□□□□□ -1.87
VPS53YJL029C TYW3P53177 273 aa3.37□□□□□ -1.87
VPS53YJL029C IDP3P53982 420 aaKnown RBP3.37□□□□□ -1.87
VPS53YJL029C YPL071CQ02864 156 aa3.37□□□□□ -1.87
VPS53YJL029C YDR124WQ04608 324 aa3.37□□□□□ -1.87
VPS53YJL029C RIF2Q06208 395 aa3.37□□□□□ -1.87
VPS53YJL029C MSL5Q12186 476 aaKnown RBP RIP-Chip data3.37□□□□□ -1.87not detected
VPS53YJL029C YOR032W-AQ8TGS1 66 aa3.37□□□□□ -1.87
VPS53YJL029C SLH1P53327 1967 aaKnown RBP3.37□□□□□ -1.87
VPS53YJL029C YPR096CO13587 100 aa3.36□□□□□ -1.87
VPS53YJL029C COR1P07256 457 aa3.36□□□□□ -1.87
VPS53YJL029C GLK1P17709 500 aaKnown RBP3.36□□□□□ -1.87
VPS53YJL029C BUB2P26448 306 aaPredicted RBP3.36□□□□□ -1.87
VPS53YJL029C NRP1P32770 719 aaKnown RBP RIP-Chip data3.36□□□□□ -1.87not detected
VPS53YJL029C VPS52P39904 641 aa3.36□□□□□ -1.87
VPS53YJL029C GID8P40208 455 aa3.36□□□□□ -1.87
VPS53YJL029C YIL152WP40455 235 aa3.36□□□□□ -1.87
VPS53YJL029C VMA13P41807 478 aaKnown RBP3.36□□□□□ -1.87
VPS53YJL029C YGL176CP46945 554 aa3.36□□□□□ -1.87
VPS53YJL029C OCA1P50946 238 aaPredicted RBP3.36□□□□□ -1.87
VPS53YJL029C YPS7Q06325 596 aa3.36□□□□□ -1.87
VPS53YJL029C CDA2Q06703 312 aa3.36□□□□□ -1.87
VPS53YJL029C YOL159CQ08300 171 aa3.36□□□□□ -1.87
VPS53YJL029C GPN2Q08726 347 aaPredicted RBP3.36□□□□□ -1.87
VPS53YJL029C MMT2Q08970 484 aa3.36□□□□□ -1.87
VPS53YJL029C YLR049CQ12110 428 aa3.36□□□□□ -1.87
VPS53YJL029C RRP36Q12481 300 aaPredicted RBP3.36□□□□□ -1.87
VPS53YJL029C YCR102CP25608 368 aa3.36□□□□□ -1.87
VPS53YJL029C PTH2P34222 208 aa3.36□□□□□ -1.87
VPS53YJL029C APT2P36973 181 aa3.36□□□□□ -1.87
VPS53YJL029C ARN1P38731 627 aa3.36□□□□□ -1.87
VPS53YJL029C YHR210CP38893 341 aa3.36□□□□□ -1.87
VPS53YJL029C AYR1P40471 297 aa3.36□□□□□ -1.87
VPS53YJL029C SEC27P41811 889 aaKnown RBP3.36□□□□□ -1.87
VPS53YJL029C IKS1P47042 667 aa3.36□□□□□ -1.87
VPS53YJL029C UBX6P47049 396 aa3.36□□□□□ -1.87
VPS53YJL029C JHD2P47156 728 aaPredicted RBP3.36□□□□□ -1.87
VPS53YJL029C ROG1P53118 685 aa3.36□□□□□ -1.87
VPS53YJL029C ATG38Q05789 226 aaKnown RBP3.36□□□□□ -1.87
VPS53YJL029C RAX1Q08760 435 aa3.36□□□□□ -1.87
VPS53YJL029C TMS1Q12116 473 aa3.36□□□□□ -1.87
VPS53YJL029C YKL033W-AQ86ZR7 236 aa3.36□□□□□ -1.87
VPS53YJL029C IPP1P00817 287 aaKnown RBP3.35□□□□□ -1.87
VPS53YJL029C NPR1P22211 790 aa3.35□□□□□ -1.87
VPS53YJL029C AGP1P25376 633 aa3.35□□□□□ -1.87
VPS53YJL029C PBN1P25580 416 aa3.35□□□□□ -1.87
VPS53YJL029C MLS1P30952 554 aa3.35□□□□□ -1.87
VPS53YJL029C MRE11P32829 692 aa3.35□□□□□ -1.87
VPS53YJL029C LOS1P33418 1100 aaPredicted RBP3.35□□□□□ -1.87
VPS53YJL029C RPS27AP35997 82 aaKnown RBP3.35□□□□□ -1.87
VPS53YJL029C RPS27BP38711 82 aa3.35□□□□□ -1.87
VPS53YJL029C MBP1P39678 833 aa3.35□□□□□ -1.87
VPS53YJL029C RSP5P39940 809 aaKnown RBP3.35□□□□□ -1.87
VPS53YJL029C PRM2P40534 656 aa3.35□□□□□ -1.87
VPS53YJL029C PAC11P40960 533 aa3.35□□□□□ -1.87
VPS53YJL029C GUS1P46655 708 aaKnown RBP RIP-Chip data3.35□□□□□ -1.87not detected
VPS53YJL029C MAD3P47074 515 aa3.35□□□□□ -1.87
VPS53YJL029C YJR154WP47181 346 aa3.35□□□□□ -1.87
VPS53YJL029C GTO1P48239 356 aa3.35□□□□□ -1.87
VPS53YJL029C RAD17P48581 401 aa3.35□□□□□ -1.87
VPS53YJL029C IMA1P53051 589 aa3.35□□□□□ -1.87
VPS53YJL029C SSQ1Q05931 657 aaPredicted RBP3.35□□□□□ -1.87
VPS53YJL029C PDR8Q06149 701 aa3.35□□□□□ -1.87
VPS53YJL029C YPR172WQ06608 200 aa3.35□□□□□ -1.87
VPS53YJL029C ENT4Q07872 247 aa3.35□□□□□ -1.87
VPS53YJL029C YTM1Q12024 460 aaPredicted RBP3.35□□□□□ -1.87
VPS53YJL029C SAS5Q99314 248 aa3.35□□□□□ -1.87
VPS53YJL029C CYR1P08678 2026 aaKnown RBP3.35□□□□□ -1.87
VPS53YJL029C NUM1Q00402 2748 aa3.35□□□□□ -1.87
VPS53YJL029C AI1P03875 834 aa3.35□□□□□ -1.87
VPS53YJL029C RAP1P11938 827 aa3.35□□□□□ -1.87
VPS53YJL029C CDC10P25342 322 aaKnown RBP3.35□□□□□ -1.87
VPS53YJL029C AAR2P32357 355 aaPredicted RBP3.35□□□□□ -1.87
VPS53YJL029C CDC12P32468 407 aaKnown RBP3.35□□□□□ -1.87
VPS53YJL029C MNN2P38069 597 aa3.35□□□□□ -1.87
VPS53YJL029C SEA4P38164 1038 aa3.35□□□□□ -1.87
VPS53YJL029C BNA4P38169 460 aa3.35□□□□□ -1.87
VPS53YJL029C CUP9P41817 306 aa3.35□□□□□ -1.87
VPS53YJL029C CCT7P42943 550 aaKnown RBP3.35□□□□□ -1.87
VPS53YJL029C SKP1P52286 194 aa3.35□□□□□ -1.87
VPS53YJL029C MON1P53129 644 aa3.35□□□□□ -1.87
VPS53YJL029C HOL1P53389 586 aa3.35□□□□□ -1.87
VPS53YJL029C MMT1Q03218 510 aa3.35□□□□□ -1.87
VPS53YJL029C YET2Q04210 160 aa3.35□□□□□ -1.87
VPS53YJL029C APC4Q04601 652 aa3.35□□□□□ -1.87
VPS53YJL029C YDR338CQ05497 695 aa3.35□□□□□ -1.87
VPS53YJL029C VPS74Q06385 345 aa3.35□□□□□ -1.87
VPS53YJL029C OMS1Q06668 471 aa3.35□□□□□ -1.87
VPS53YJL029C PSR1Q07800 427 aa3.35□□□□□ -1.87
VPS53YJL029C APC9Q12107 265 aa3.35□□□□□ -1.87
VPS53YJL029C CSF1Q12150 2958 aa3.35□□□□□ -1.87
VPS53YJL029C RPL7AP05737 244 aaKnown RBP3.34□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 59.2 ms