RNA–Protein interactions for RNA: YER012W

PRE1, Transcript of Beta 4 subunit of the 20S proteasome, yeastyeast

Gene PRE1, Length 597 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE1YER012W YGR127WP53275 312 aa2.94□□□□□ -1.94
PRE1YER012W ELP3Q02908 557 aaKnown RBP2.94□□□□□ -1.94
PRE1YER012W PIR3Q03180 325 aa2.94□□□□□ -1.94
PRE1YER012W HEL2Q05580 639 aaKnown RBP2.94□□□□□ -1.94
PRE1YER012W PBA1Q05778 276 aa2.94□□□□□ -1.94
PRE1YER012W MHR1Q06630 226 aa2.94□□□□□ -1.94
PRE1YER012W LUC7Q07508 261 aaPredicted RBP2.94□□□□□ -1.94
PRE1YER012W RRP12Q12754 1228 aaKnown RBP2.94□□□□□ -1.94
PRE1YER012W BEM2P39960 2167 aaKnown RBP2.94□□□□□ -1.94
PRE1YER012W ACC1Q00955 2233 aaKnown RBP2.93□□□□□ -1.94
PRE1YER012W TOR1P35169 2470 aa2.93□□□□□ -1.94
PRE1YER012W MF(ALPHA)1P01149 165 aa2.93□□□□□ -1.94
PRE1YER012W MRP13P12686 339 aa2.93□□□□□ -1.94
PRE1YER012W SNA3P14359 133 aa2.93□□□□□ -1.94
PRE1YER012W AAC3P18238 307 aa2.93□□□□□ -1.94
PRE1YER012W YCR007CP25354 239 aa2.93□□□□□ -1.94
PRE1YER012W YKL097CP34245 136 aa2.93□□□□□ -1.94
PRE1YER012W YHR210CP38893 341 aa2.93□□□□□ -1.94
PRE1YER012W ALD5P40047 520 aaKnown RBP2.93□□□□□ -1.94
PRE1YER012W FIS1P40515 155 aa2.93□□□□□ -1.94
PRE1YER012W APT1P49435 187 aaKnown RBP2.93□□□□□ -1.94
PRE1YER012W LSB1P53281 241 aa2.93□□□□□ -1.94
PRE1YER012W YSA1Q01976 231 aa2.93□□□□□ -1.94
PRE1YER012W COQ9Q05779 260 aa2.93□□□□□ -1.94
PRE1YER012W VPS74Q06385 345 aa2.93□□□□□ -1.94
PRE1YER012W MRPL35Q06678 367 aa2.93□□□□□ -1.94
PRE1YER012W YPL272CQ08984 517 aa2.93□□□□□ -1.94
PRE1YER012W RKM5Q12367 367 aa2.93□□□□□ -1.94
PRE1YER012W SPE4Q12455 300 aa2.93□□□□□ -1.94
PRE1YER012W TY1B-AO13527 1196 aaKnown RBP2.92□□□□□ -1.94
PRE1YER012W FUM1P08417 488 aaKnown RBP2.92□□□□□ -1.94
PRE1YER012W RPL4AP10664 362 aaKnown RBP2.92□□□□□ -1.94
PRE1YER012W KAR3P17119 729 aa2.92□□□□□ -1.94
PRE1YER012W SSE2P32590 693 aaKnown RBP2.92□□□□□ -1.94
PRE1YER012W MSN2P33748 704 aa2.92□□□□□ -1.94
PRE1YER012W SIF2P38262 535 aa2.92□□□□□ -1.94
PRE1YER012W PES4P39684 611 aa2.92□□□□□ -1.94
PRE1YER012W TMA108P40462 946 aa2.92□□□□□ -1.94
PRE1YER012W UPF3P48412 387 aaKnown RBP2.92□□□□□ -1.94
PRE1YER012W RPL4BP49626 362 aaKnown RBP2.92□□□□□ -1.94
PRE1YER012W SDT1P53078 280 aa2.92□□□□□ -1.94
PRE1YER012W APJ1P53940 528 aa2.92□□□□□ -1.94
PRE1YER012W BUD22Q04347 519 aaKnown RBP2.92□□□□□ -1.94
PRE1YER012W ETT1Q08421 412 aaKnown RBP2.92□□□□□ -1.94
PRE1YER012W LSP1Q12230 341 aaKnown RBP2.92□□□□□ -1.94
PRE1YER012W HRT3Q12347 344 aa2.92□□□□□ -1.94
PRE1YER012W SOD1P00445 154 aaKnown RBP2.91□□□□□ -1.94
PRE1YER012W MATALPHA2P0CY08 210 aa2.91□□□□□ -1.94
PRE1YER012W HMLALPHA2P0CY09 210 aa2.91□□□□□ -1.94
PRE1YER012W CDC24P11433 854 aaPredicted RBP2.91□□□□□ -1.94
PRE1YER012W RME1P32338 300 aaKnown RBP2.91□□□□□ -1.94
PRE1YER012W RPN12P32496 274 aa2.91□□□□□ -1.94
PRE1YER012W CSE2P33308 149 aa2.91□□□□□ -1.94
PRE1YER012W BMH2P34730 273 aaKnown RBP2.91□□□□□ -1.94
PRE1YER012W SRO77P38163 1010 aa2.91□□□□□ -1.94
PRE1YER012W YHL026CP38740 315 aa2.91□□□□□ -1.94
PRE1YER012W CIN4P39110 191 aa2.91□□□□□ -1.94
PRE1YER012W YFL067WP43537 175 aa2.91□□□□□ -1.94
PRE1YER012W MNP1P53163 194 aaPredicted RBP2.91□□□□□ -1.94
PRE1YER012W RET3P53600 189 aa2.91□□□□□ -1.94
PRE1YER012W PGA2P53903 129 aa2.91□□□□□ -1.94
PRE1YER012W RPC11Q04307 110 aaPredicted RBP2.91□□□□□ -1.94
PRE1YER012W THP1Q08231 455 aa2.91□□□□□ -1.94
PRE1YER012W ERV2Q12284 196 aa2.91□□□□□ -1.94
PRE1YER012W SKM1Q12469 655 aa2.91□□□□□ -1.94
PRE1YER012W NUM1Q00402 2748 aa2.91□□□□□ -1.94
PRE1YER012W ADH2P00331 348 aaKnown RBP2.9□□□□□ -1.95
PRE1YER012W MES1P00958 751 aaKnown RBP2.9□□□□□ -1.95
PRE1YER012W YIH1P25637 258 aa2.9□□□□□ -1.95
PRE1YER012W PAD1P33751 242 aaKnown RBP RIP-Chip data2.9□□□□□ -1.95not detected
PRE1YER012W HMF1P40037 129 aaKnown RBP2.9□□□□□ -1.95
PRE1YER012W NDE1P40215 560 aa2.9□□□□□ -1.95
PRE1YER012W ELP2P42935 788 aa2.9□□□□□ -1.95
PRE1YER012W ARC1P46672 376 aaKnown RBP2.9□□□□□ -1.95
PRE1YER012W AVT4P50944 713 aa2.9□□□□□ -1.95
PRE1YER012W ZPR1P53303 486 aaKnown RBP2.9□□□□□ -1.95
PRE1YER012W GPI1P53306 609 aa2.9□□□□□ -1.95
PRE1YER012W BSC5P53755 489 aa2.9□□□□□ -1.95
PRE1YER012W IPI3P53877 555 aa2.9□□□□□ -1.95
PRE1YER012W BNI5P53890 448 aaKnown RBP2.9□□□□□ -1.95
PRE1YER012W YNL146WP53906 100 aa2.9□□□□□ -1.95
PRE1YER012W IES4Q08561 116 aa2.9□□□□□ -1.95
PRE1YER012W RRG7Q08774 242 aaPredicted RBP2.9□□□□□ -1.95
PRE1YER012W EST1P17214 699 aaPredicted RBP2.89□□□□□ -1.95
PRE1YER012W ISY1P21374 235 aaPredicted RBP2.89□□□□□ -1.95
PRE1YER012W ELO2P25358 347 aa2.89□□□□□ -1.95
PRE1YER012W BNA4P38169 460 aa2.89□□□□□ -1.95
PRE1YER012W NOP16P40007 231 aaKnown RBP2.89□□□□□ -1.95
PRE1YER012W FAU1P40099 211 aa2.89□□□□□ -1.95
PRE1YER012W YER186CP40101 306 aa2.89□□□□□ -1.95
PRE1YER012W YGR210CP42942 411 aa2.89□□□□□ -1.95
PRE1YER012W CAF130P53280 1122 aaPredicted RBP2.89□□□□□ -1.95
PRE1YER012W YKU80Q04437 629 aa2.89□□□□□ -1.95
PRE1YER012W CDD1Q06549 142 aa2.89□□□□□ -1.95
PRE1YER012W PKH2Q12236 1081 aaKnown RBP2.89□□□□□ -1.95
PRE1YER012W MED1Q12321 566 aa2.89□□□□□ -1.95
PRE1YER012W HSP82P02829 709 aaKnown RBP2.88□□□□□ -1.95
PRE1YER012W MET8P15807 274 aa2.88□□□□□ -1.95
PRE1YER012W THR4P16120 514 aaKnown RBP2.88□□□□□ -1.95
PRE1YER012W HEM15P16622 393 aa2.88□□□□□ -1.95
Retrieved 100 of 5,963 RNA–protein pairs in 33.7 ms